##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545533_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1396664 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.300022768539893 31.0 31.0 33.0 30.0 34.0 2 31.63882938201314 31.0 31.0 34.0 30.0 34.0 3 31.725098520474504 31.0 31.0 34.0 30.0 34.0 4 35.43354736715488 37.0 35.0 37.0 33.0 37.0 5 35.28027857809752 37.0 35.0 37.0 33.0 37.0 6 35.364567283183355 37.0 35.0 37.0 33.0 37.0 7 35.853533133237484 37.0 35.0 37.0 35.0 37.0 8 35.885083312808234 37.0 35.0 37.0 35.0 37.0 9 37.58912809380065 39.0 37.0 39.0 35.0 39.0 10 36.907040633967796 39.0 37.0 39.0 32.0 39.0 11 36.51361601645063 39.0 35.0 39.0 32.0 39.0 12 35.512179736858684 37.0 35.0 39.0 31.0 39.0 13 35.047585532382875 37.0 34.0 39.0 30.0 39.0 14 35.96205529748028 38.0 35.0 40.0 30.0 41.0 15 36.30864975398521 38.0 35.0 40.0 31.0 41.0 16 36.53432822783432 38.0 35.0 40.0 32.0 41.0 17 36.50753151795994 38.0 35.0 40.0 32.0 41.0 18 36.42316476976567 37.0 35.0 40.0 31.0 41.0 19 36.38516994781852 37.0 35.0 40.0 31.0 41.0 20 36.19666218933115 37.0 35.0 40.0 31.0 41.0 21 35.98883983549372 36.0 34.0 40.0 30.0 41.0 22 35.919980754139864 36.0 34.0 40.0 30.0 41.0 23 35.929827789647334 36.0 34.0 40.0 30.0 41.0 24 35.86803912752101 36.0 34.0 40.0 30.0 41.0 25 35.76205300630646 36.0 34.0 40.0 30.0 41.0 26 35.656430608936724 36.0 34.0 40.0 30.0 41.0 27 35.588129285211046 36.0 34.0 40.0 30.0 41.0 28 35.60519137029379 36.0 34.0 40.0 30.0 41.0 29 35.64440839027855 36.0 34.0 40.0 30.0 41.0 30 35.57659036103171 36.0 34.0 40.0 30.0 41.0 31 35.3778940389385 36.0 34.0 40.0 29.0 41.0 32 35.1820609681355 36.0 34.0 40.0 29.0 41.0 33 34.98339829765785 36.0 34.0 40.0 27.0 41.0 34 34.83015886426514 35.0 34.0 40.0 27.0 41.0 35 34.67171417033732 35.0 34.0 40.0 26.0 41.0 36 34.47839423082431 35.0 33.0 40.0 25.0 41.0 37 34.427960482979444 35.0 33.0 40.0 25.0 41.0 38 34.45334955293471 35.0 33.0 40.0 25.0 41.0 39 34.45287270238225 35.0 33.0 40.0 25.0 41.0 40 34.254268027242055 35.0 33.0 40.0 24.0 41.0 41 34.261101453177 35.0 33.0 40.0 24.0 41.0 42 34.19131731039105 35.0 33.0 40.0 24.0 41.0 43 34.08842856979202 35.0 33.0 40.0 24.0 41.0 44 34.045544955694425 35.0 33.0 40.0 23.0 41.0 45 34.020413642794544 35.0 33.0 40.0 23.0 41.0 46 33.999174461430954 35.0 33.0 40.0 23.0 41.0 47 33.93871754409078 35.0 33.0 40.0 23.0 41.0 48 33.95692879604543 35.0 33.0 40.0 23.0 41.0 49 33.914819885097636 35.0 33.0 39.0 24.0 41.0 50 33.78389505278292 35.0 33.0 39.0 24.0 41.0 51 33.593005189508716 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 7.0 14 9.0 15 54.0 16 141.0 17 346.0 18 824.0 19 1565.0 20 2690.0 21 4275.0 22 6446.0 23 9420.0 24 13292.0 25 18834.0 26 24582.0 27 28286.0 28 31064.0 29 34899.0 30 41357.0 31 50450.0 32 62259.0 33 81474.0 34 142043.0 35 227134.0 36 90200.0 37 106610.0 38 152412.0 39 265852.0 40 134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.43218984666319 22.129731989941746 29.10084315196783 14.337235011427229 2 30.910655676669553 25.86305654044208 29.622801189119212 13.603486593769155 3 28.527906497196177 25.280167599365345 32.114595922856175 14.0773299805823 4 25.655490511676394 27.394777842057934 31.474427636138685 15.475304010126989 5 21.641998361810717 32.62925084343836 30.570058367653207 15.158692427097714 6 20.336315677929694 41.226236231477294 28.319624476609977 10.117823613983033 7 86.41856595430254 4.610557728988504 7.000037231574667 1.9708390851342916 8 87.23730260105509 3.780007217197551 6.919774548495558 2.062915633251806 9 84.00610311427802 4.972921189348333 8.531615334826414 2.48936036154723 10 52.31745072544292 21.960041928481008 15.409146365911916 10.313360980164163 11 47.50892125808355 20.91669864763465 19.27578859339111 12.298591500890693 12 43.09139492390439 21.57132996912643 23.79512896444671 11.542146142522467 13 20.66502752272558 44.05733948895368 21.81462398973554 13.463008998585199 14 14.414920123952504 44.48514460170807 27.293393400273796 13.806541874065632 15 12.691527811986274 24.03777859241736 50.36522742764187 12.905466167954497 16 13.851434561211573 18.414951627592608 48.214602796377655 19.519011014818165 17 14.61403744923618 19.211134531999107 29.46771736079687 36.707110657967846 18 20.124024103148646 23.213242411918685 37.29386595487533 19.368867530057337 19 29.026594800181005 25.690072916606997 25.691003705973664 19.592328577238334 20 32.09046699850501 22.241856309033526 27.066638790718457 18.601037901743013 21 20.951853846021663 28.64969670586483 29.263301696041427 21.13514775207208 22 21.711163171671927 25.195250969452925 25.34718443376503 27.74640142511012 23 17.886549664056638 31.808151423678137 25.19868773019137 25.106611182073856 24 18.80867552969075 23.241452489646758 42.10239542223469 15.847476558427797 25 15.51418236598065 27.024824868400703 36.360069422566916 21.10092334305173 26 16.94566481272518 35.33706030942302 27.614587330954333 20.102687546897464 27 15.955233327414467 37.33310230663925 28.531844452208976 18.179819913737305 28 13.506756098818325 29.931178866212633 39.35821357176816 17.203851463200884 29 14.293702708740256 24.42677694850014 38.22565771008632 23.053862632673283 30 17.06165548764771 32.88672150209356 31.93180321108012 18.119819799178615 31 27.720267723661525 28.817023994317886 25.89627856091372 17.566429721106864 32 29.719674882434145 25.714703035232528 27.293107003545593 17.27251507878774 33 27.690482463928333 29.439793679797 24.82851995898799 18.041203897286678 34 19.007076863153916 27.742463470097317 27.109383502402867 26.1410761643459 35 19.953403252321245 26.77981246742237 31.413138736303075 21.853645543953306 36 30.0765968049581 26.83966938361696 26.162054724686822 16.921679086738113 37 19.05290033966652 34.27051889359216 29.88156063305133 16.79502013368999 38 18.40406855192086 34.33746412880979 25.996445816602993 21.262021502666354 39 19.98476369405956 33.7242887337255 27.932129703350267 18.358817868864666 40 24.284294576218763 25.875013603844586 27.367713351242674 22.472978468693974 41 16.244207626172077 25.63100359141497 28.86793101275611 29.25685776965684 42 21.16464661507707 25.59191043801516 25.011097873217896 28.232345073689878 43 20.87824988687329 26.471219992782803 27.256877817427817 25.39365230291609 44 17.82669274786205 31.158102449837617 29.653374039854967 21.36183076244537 45 15.684946415172153 40.99017372825533 22.566272202906354 20.758607653666164 46 21.00240286854963 35.78512799069784 25.461313529954232 17.751155610798303 47 20.044835407800303 29.856787316061702 27.265469719273927 22.832907556864072 48 22.011378542011535 24.721980376096184 32.0062663604131 21.26037472147918 49 20.913190287714155 25.37969046241616 33.04875045107485 20.658368798794843 50 19.013807186266703 36.22818372922908 25.89269860181117 18.865310482693047 51 17.193254784257345 35.146033691711104 24.87949857660826 22.78121294742329 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1312.0 1 1670.0 2 2028.0 3 5550.0 4 9072.0 5 6946.0 6 4820.0 7 5268.0 8 5716.0 9 6108.5 10 6501.0 11 6923.5 12 7346.0 13 7413.5 14 7481.0 15 7111.5 16 6742.0 17 6273.0 18 5804.0 19 5890.0 20 5976.0 21 5995.5 22 6015.0 23 6667.5 24 7320.0 25 8199.5 26 12054.0 27 15029.0 28 16360.0 29 17691.0 30 21537.5 31 25384.0 32 30820.5 33 36257.0 34 40141.0 35 44025.0 36 46590.5 37 49156.0 38 58874.0 39 68592.0 40 92228.5 41 115865.0 42 135187.0 43 154509.0 44 152241.0 45 149973.0 46 142818.0 47 135663.0 48 123209.5 49 110756.0 50 100883.5 51 91011.0 52 82870.5 53 74730.0 54 64203.5 55 53677.0 56 47748.0 57 41819.0 58 38570.5 59 35322.0 60 32211.0 61 29100.0 62 24945.0 63 20790.0 64 17331.0 65 13872.0 66 11484.0 67 9096.0 68 7974.5 69 6853.0 70 6224.5 71 5596.0 72 4384.0 73 3172.0 74 2441.0 75 1370.5 76 1031.0 77 626.5 78 222.0 79 230.0 80 238.0 81 231.0 82 224.0 83 151.0 84 78.0 85 42.5 86 7.0 87 4.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1396664.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.75543265221121 #Duplication Level Percentage of deduplicated Percentage of total 1 80.56033091821077 13.498231991399287 2 7.50938423573405 2.5164596364283685 3 2.6180430088437414 1.315993299458211 4 1.2815376568497274 0.8589087160247267 5 0.7823325801627257 0.6554160429273589 6 0.4804775510677356 0.4830365548688889 7 0.36892397860939985 0.4327036614162926 8 0.2999023933037057 0.40199954825897594 9 0.22821445797716533 0.344144878280755 >10 2.923335868375282 11.91215385056762 >50 1.2479199992706687 15.237294549066826 >100 1.6901336356408034 50.57720245114429 >500 0.007743040326173189 0.7761935677446551 >1k 0.001290506721028865 0.5389892747325221 >5k 4.3016890700962163E-4 0.45127197768124105 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6261 0.448282478820962 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4887 0.34990520268296454 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02949886300498903 0.0 2 0.0 0.0 0.0 0.0964440982226219 0.0 3 0.0 0.0 0.0 0.13711243362755823 0.0 4 0.0 0.0 0.0 0.22403384063740456 0.0 5 0.0 0.0 0.0 0.36916538265466853 0.0 6 0.0 0.0 0.0 0.5138673295796269 0.0 7 0.0 0.0 0.0 0.6015763275920336 0.0 8 0.0 0.0 0.0 0.8186650475704965 0.0 9 0.0 0.0 0.0 0.8851806876958238 0.0 10 0.0 0.0 0.0 1.0104076571029252 0.0 11 0.0 0.0 0.0 1.168785047799614 0.0 12 0.0 0.0 0.0 1.2982363689477212 0.0 13 7.159918205094426E-5 0.0 0.0 1.349644581660299 0.0 14 7.159918205094426E-5 0.0 0.0 1.3689047616320031 0.0 15 7.159918205094426E-5 0.0 0.0 1.4029859722882525 0.0 16 1.431983641018885E-4 0.0 0.0 1.4819598700904442 0.0 17 1.431983641018885E-4 0.0 0.0 1.5729624304771943 0.0 18 1.431983641018885E-4 0.0 0.0 1.7086428804637337 0.0 19 1.431983641018885E-4 0.0 0.0 1.7701465778454948 0.0 20 1.431983641018885E-4 0.0 0.0 1.8292159030375237 0.0 21 1.431983641018885E-4 0.0 0.0 1.9156361157730135 0.0 22 1.431983641018885E-4 0.0 0.0 2.006495477795662 0.0 23 1.431983641018885E-4 0.0 0.0 2.125493318364331 0.0 24 1.431983641018885E-4 0.0 0.0 2.2106247458229036 0.0 25 2.1479754615283275E-4 0.0 0.0 2.282080729509746 0.0 26 2.1479754615283275E-4 0.0 0.0 2.3571166722991355 0.0 27 2.1479754615283275E-4 0.0 0.0 2.425780287885991 0.0 28 2.1479754615283275E-4 0.0 0.0 2.5002434372189732 0.0 29 2.1479754615283275E-4 0.0 0.0 2.5805777194801327 0.0 30 2.1479754615283275E-4 0.0 0.0 2.6962819976744585 0.0 31 2.1479754615283275E-4 0.0 0.0 2.7949456705406597 0.0 32 2.86396728203777E-4 0.0 0.0 2.8850174415607475 0.0 33 2.86396728203777E-4 0.0 0.0 2.978024779044924 0.0 34 2.86396728203777E-4 0.0 0.0 3.076903249457278 0.0 35 2.86396728203777E-4 0.0 0.0 3.2101493272540855 0.0 36 2.86396728203777E-4 0.0 0.0 3.3164025134176867 0.0 37 2.86396728203777E-4 0.0 0.0 3.4258060635915295 0.0 38 2.86396728203777E-4 0.0 0.0 3.5353528121294744 0.0 39 2.86396728203777E-4 0.0 0.0 3.6434675770264002 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGC 45 3.8562575E-10 45.000004 23 GCTATCG 30 2.165838E-6 45.000004 38 GAACGAT 30 2.165838E-6 45.000004 43 CGTCGCA 30 2.165838E-6 45.000004 45 CGACTGG 45 3.8562575E-10 45.000004 2 CCGTTAT 30 2.165838E-6 45.000004 39 TACACGG 30 2.165838E-6 45.000004 2 GACTAAC 30 2.165838E-6 45.000004 9 TCGCAAA 20 7.033809E-4 45.0 30 CGTTGTA 20 7.033809E-4 45.0 25 GATCCGA 20 7.033809E-4 45.0 44 CGTTATT 20 7.033809E-4 45.0 18 TGCGCAA 20 7.033809E-4 45.0 37 ACGTGTA 20 7.033809E-4 45.0 31 TCGCTAA 20 7.033809E-4 45.0 26 TATTACG 20 7.033809E-4 45.0 1 TTGCGAA 20 7.033809E-4 45.0 28 CTCGCTA 20 7.033809E-4 45.0 25 TCGTACT 20 7.033809E-4 45.0 18 TATAGCG 80 0.0 45.0 1 >>END_MODULE