##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545530_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2568338 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.302457464710642 31.0 31.0 33.0 30.0 34.0 2 31.657596079643724 31.0 31.0 34.0 30.0 34.0 3 31.75000214146269 31.0 31.0 34.0 30.0 34.0 4 35.46099929214924 37.0 35.0 37.0 33.0 37.0 5 35.31919163287698 37.0 35.0 37.0 33.0 37.0 6 35.39516449937664 37.0 35.0 37.0 33.0 37.0 7 35.85048541118809 37.0 35.0 37.0 35.0 37.0 8 35.87679931535491 37.0 35.0 37.0 35.0 37.0 9 37.572678518170115 39.0 37.0 39.0 35.0 39.0 10 36.89920758093366 39.0 37.0 39.0 32.0 39.0 11 36.526661210479304 39.0 35.0 39.0 32.0 39.0 12 35.92046179280141 37.0 35.0 39.0 31.0 39.0 13 35.642206750046135 37.0 35.0 39.0 30.0 39.0 14 36.62867621006269 38.0 35.0 41.0 31.0 41.0 15 36.81795269937212 38.0 35.0 41.0 31.0 41.0 16 36.938502642564956 38.0 35.0 41.0 32.0 41.0 17 36.880490807674065 38.0 35.0 41.0 32.0 41.0 18 36.799757664294965 38.0 35.0 40.0 31.0 41.0 19 36.745310780746145 38.0 35.0 40.0 31.0 41.0 20 36.617203810401904 38.0 35.0 40.0 31.0 41.0 21 36.43943164801517 38.0 35.0 40.0 31.0 41.0 22 36.37568575475658 38.0 35.0 40.0 30.0 41.0 23 36.31429001946005 38.0 35.0 40.0 30.0 41.0 24 36.23780748484039 38.0 35.0 40.0 30.0 41.0 25 36.12915005735226 38.0 35.0 40.0 30.0 41.0 26 36.035276120199136 38.0 35.0 40.0 30.0 41.0 27 35.99557145515894 38.0 34.0 40.0 30.0 41.0 28 35.95915763423662 38.0 35.0 40.0 30.0 41.0 29 35.92250825241849 38.0 35.0 40.0 30.0 41.0 30 35.802397114398495 37.0 34.0 40.0 30.0 41.0 31 35.639346923964055 37.0 34.0 40.0 29.0 41.0 32 35.47300277455693 37.0 34.0 40.0 29.0 41.0 33 35.31276568738227 37.0 34.0 40.0 27.0 41.0 34 35.12690035345815 37.0 34.0 40.0 27.0 41.0 35 34.97640108116611 37.0 34.0 40.0 26.0 41.0 36 34.830607965151 37.0 34.0 40.0 25.0 41.0 37 34.76835642349255 37.0 33.0 40.0 25.0 41.0 38 34.724692388618635 37.0 33.0 40.0 25.0 41.0 39 34.63776224157412 37.0 33.0 40.0 24.0 41.0 40 34.478055847789506 37.0 33.0 40.0 24.0 41.0 41 34.4181824977865 36.0 33.0 40.0 24.0 41.0 42 34.334902960591634 36.0 33.0 40.0 23.0 41.0 43 34.24623083098876 36.0 33.0 40.0 23.0 41.0 44 34.182194866875 36.0 33.0 40.0 23.0 41.0 45 34.132442069540694 36.0 33.0 40.0 23.0 41.0 46 34.09709469703754 35.0 33.0 40.0 23.0 41.0 47 34.03313310008262 35.0 33.0 40.0 23.0 41.0 48 33.98449035913497 35.0 33.0 40.0 23.0 41.0 49 33.921362764558246 36.0 33.0 40.0 24.0 41.0 50 33.806629423385864 35.0 33.0 40.0 23.0 41.0 51 33.66147485260896 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 6.0 13 10.0 14 28.0 15 99.0 16 323.0 17 795.0 18 1729.0 19 3294.0 20 5586.0 21 8609.0 22 12630.0 23 17925.0 24 24642.0 25 33288.0 26 42791.0 27 50063.0 28 55904.0 29 62748.0 30 74004.0 31 88821.0 32 108939.0 33 138720.0 34 220993.0 35 316643.0 36 192576.0 37 237205.0 38 331454.0 39 538285.0 40 225.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.34568892412136 22.314508448654344 29.235248631605344 15.104553995618957 2 32.05446479396403 25.65410004446455 28.83818251336078 13.453252648210634 3 29.051666875621514 25.347092166217998 31.843199765762918 13.758041192397574 4 25.873697309310533 28.032992542258846 31.52610754503496 14.56720260339566 5 23.403228079793237 32.542640415708526 30.133339147729 13.92079235676924 6 21.02963083519381 42.04158486928122 26.653695892051594 10.275088403473374 7 87.07841413396523 4.055813526101315 7.139325119980314 1.726447219953137 8 88.0158686278831 3.3006169748685728 6.965516220995835 1.7179981762525025 9 83.35347606117264 5.179380595544667 8.456324673777361 3.010818669505338 10 45.90026702092948 26.007207774054663 15.800023205668412 12.292501999347438 11 37.54069752501423 23.072547304910803 24.111546065977297 15.27520910409767 12 35.27514680700126 21.20269995615842 27.723259166044343 15.798894070795978 13 22.545085576742625 32.955202936685126 27.26868504067611 17.231026445896138 14 18.293620232228 34.38021008138337 30.0579985967579 17.268171089630727 15 18.044899074810246 23.977490501639583 41.27934095901708 16.698269464533094 16 20.299314186839894 20.7204425585729 39.74106990590802 19.239173348679184 17 20.26162444351172 20.922674507794532 29.650770264661425 29.16493078403232 18 22.216429457493522 23.26909464408501 34.450566864641644 20.063909033779822 19 26.774318644975857 24.974438722629184 27.73988470364882 20.511357928746136 20 29.155469412515018 24.06042351123567 27.137160295880058 19.64694678036925 21 23.809560891128815 26.34536420050632 30.041723480320737 19.803351428044127 22 23.05331307639415 22.89317060293466 28.955924025576074 25.09759229509512 23 20.87688614193303 27.81837904512568 27.73416115791613 23.570573655025157 24 20.062935641648412 24.259268055840003 36.74010196477255 18.937694337739035 25 20.105531281318893 25.48648191943584 32.64017430727576 21.767812491969515 26 19.601236285878258 30.615168252776698 28.509020230203348 21.274575231141696 27 18.88474180579036 30.284059185356444 29.927174694296465 20.90402431455673 28 17.8401752417322 27.337912689061955 34.67954762963441 20.142364439571427 29 19.578809331170586 23.92274692816911 34.48152073442047 22.016923006239832 30 20.414914236366087 28.665580620619245 31.316127394447303 19.60337774856736 31 26.454695604706234 26.51333274670234 27.366374674984367 19.665596973607055 32 26.775214165736756 25.699654796214517 28.026490282821033 19.4986407552277 33 26.12304143769239 26.77708307862906 26.656888618242615 20.442986865435937 34 20.57930069951852 26.937731715996883 29.262659354025832 23.220308230458762 35 20.890980859995842 26.523572831924767 30.912364338338644 21.673081969740743 36 27.161261485053757 25.899862089802824 27.168931815049262 19.769944610094154 37 20.74547820419275 30.477647412451166 28.858351198323582 19.918523185032498 38 21.92110228482388 30.152495504875137 26.358368719381954 21.56803349091903 39 20.883972436649692 30.32334529178013 27.216121865579996 21.57656040599018 40 24.033246402926718 25.976370711331608 27.795368055139157 22.195014830602513 41 19.743040051581996 25.291102650819326 28.252589807104826 26.713267490493852 42 21.77271838831182 25.906247542184868 26.91152799981934 25.409506069683975 43 21.4814794625941 25.894216415440646 28.087424630247266 24.536879491717993 44 20.5489698007038 28.013875120797966 29.756052357594676 21.68110272090356 45 19.03456632265691 32.929116027563346 25.616643915247916 22.419673734531827 46 21.946799837093092 30.29270290748336 27.372643320310647 20.3878539351129 47 21.62137537972027 27.659326770853372 27.860390649517313 22.858907199909044 48 22.18668259395765 26.635785476833657 29.75546832231583 21.422063606892863 49 21.70064843490226 25.531764121389006 30.825888181384226 21.94169926232451 50 20.13422688135284 30.397595643564046 28.229306267321512 21.238871207761594 51 19.80557076210374 31.31737333637551 26.837160840979653 22.0398950605411 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2346.0 1 4012.5 2 5679.0 3 14534.0 4 23389.0 5 17252.5 6 11116.0 7 11258.5 8 11401.0 9 12132.0 10 12863.0 11 13076.0 12 13289.0 13 13372.0 14 13455.0 15 12764.0 16 12073.0 17 11947.0 18 11821.0 19 11829.0 20 11837.0 21 12279.0 22 12721.0 23 13226.0 24 13731.0 25 16042.0 26 21841.0 27 25329.0 28 31579.5 29 37830.0 30 43350.0 31 48870.0 32 55425.5 33 61981.0 34 72575.5 35 83170.0 36 90451.0 37 97732.0 38 99091.5 39 100451.0 40 127740.0 41 155029.0 42 175441.5 43 195854.0 44 203915.0 45 211976.0 46 209234.0 47 206492.0 48 196248.5 49 186005.0 50 179715.5 51 173426.0 52 161024.5 53 148623.0 54 137952.0 55 127281.0 56 121046.5 57 114812.0 58 106985.0 59 99158.0 60 91583.5 61 84009.0 62 75831.5 63 67654.0 64 59148.0 65 50642.0 66 45808.0 67 40974.0 68 33748.0 69 26522.0 70 22451.5 71 18381.0 72 15617.0 73 12853.0 74 10847.5 75 7067.5 76 5293.0 77 3930.5 78 2568.0 79 1741.5 80 915.0 81 860.5 82 806.0 83 606.0 84 406.0 85 279.0 86 152.0 87 149.0 88 146.0 89 85.0 90 24.0 91 38.0 92 52.0 93 27.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2568338.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.796657598240415 #Duplication Level Percentage of deduplicated Percentage of total 1 80.03094127920723 13.442523179317286 2 6.6699044010263275 2.2406420087407213 3 2.4101121584606213 1.2144548609705763 4 1.4149512838216347 0.9506580893017078 5 0.9375158632302183 0.7873566473798385 6 0.6622657195184234 0.667431031788197 7 0.4913594127298776 0.5777237069307374 8 0.3517234747689734 0.472622301996624 9 0.320355744500996 0.4842815175011359 >10 3.580449807976221 14.734374888539723 >50 1.5726154954444804 19.148123757146816 >100 1.5491560799387496 43.52519126311272 >500 0.0077142221463923875 0.9023395499608813 >1k 7.01292922399308E-4 0.33928532488629626 >5k 0.0 0.0 >10k+ 2.3376430746643599E-4 0.51299187242674 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13065 0.5086947278746021 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4675 0.18202432857357562 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.893568525637981E-5 0.0 0.0 0.0123426122262724 0.0 2 3.893568525637981E-5 0.0 0.0 0.05820884945828781 0.0 3 3.893568525637981E-5 0.0 0.0 0.09083695370313409 0.0 4 3.893568525637981E-5 0.0 0.0 0.14573626991462962 0.0 5 3.893568525637981E-5 0.0 0.0 0.2639450103529987 0.0 6 3.893568525637981E-5 0.0 0.0 0.38032377358431796 0.0 7 3.893568525637981E-5 0.0 0.0 0.4486948368945209 0.0 8 7.787137051275962E-5 0.0 0.0 0.597857447111712 0.0 9 7.787137051275962E-5 0.0 0.0 0.6589086015937154 0.0 10 7.787137051275962E-5 0.0 0.0 0.7703425327974744 0.0 11 7.787137051275962E-5 0.0 0.0 0.9298620352928626 0.0 12 1.1680705576913942E-4 0.0 0.0 1.056325141005584 0.0 13 1.5574274102551924E-4 0.0 0.0 1.1062406895042631 0.0 14 1.5574274102551924E-4 0.0 0.0 1.1277331877657848 0.0 15 1.5574274102551924E-4 0.0 0.0 1.1620744621619117 0.0 16 1.5574274102551924E-4 0.0 0.0 1.2347673865355728 0.0 17 1.5574274102551924E-4 0.0 0.0 1.3176614604464054 0.0 18 1.5574274102551924E-4 0.0 0.0 1.4229435533796564 0.0 19 1.5574274102551924E-4 0.0 0.0 1.4808409173558932 0.0 20 1.5574274102551924E-4 0.0 0.0 1.543760984730203 0.0 21 1.5574274102551924E-4 0.0 0.0 1.6213987411314243 0.0 22 1.5574274102551924E-4 0.0 0.0 1.7033194229108475 0.0 23 1.9467842628189904E-4 0.0 0.0 1.7973491028050046 0.0 24 1.9467842628189904E-4 0.0 0.0 1.875103666261995 0.0 25 1.9467842628189904E-4 0.0 0.0 1.9352982356683583 0.0 26 1.9467842628189904E-4 0.0 0.0 1.9962325830945926 0.0 27 1.9467842628189904E-4 0.0 0.0 2.066667237723384 0.0 28 1.9467842628189904E-4 0.0 0.0 2.1335587449938442 0.0 29 1.9467842628189904E-4 0.0 0.0 2.214739648753396 0.0 30 1.9467842628189904E-4 0.0 0.0 2.3079516792571693 0.0 31 2.3361411153827885E-4 0.0 0.0 2.386952184642364 0.0 32 2.3361411153827885E-4 0.0 0.0 2.4670818248999935 0.0 33 2.3361411153827885E-4 0.0 0.0 2.5527792681492856 0.0 34 2.3361411153827885E-4 0.0 0.0 2.646030234338315 0.0 35 2.7254979679465865E-4 0.0 0.0 2.7590994643228424 0.0 36 2.7254979679465865E-4 0.0 0.0 2.851649588177257 0.0 37 2.7254979679465865E-4 0.0 0.0 2.949339222485514 0.0 38 2.7254979679465865E-4 0.0 0.0 3.059760825872607 0.0 39 2.7254979679465865E-4 0.0 0.0 3.2193192640532518 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGA 40 6.8212103E-9 45.000004 8 TAACGCG 20 7.0349145E-4 45.000004 1 GCGATCG 20 7.0349145E-4 45.000004 9 ACTCGAC 25 3.8921557E-5 45.0 40 TAATACG 180 0.0 41.250004 1 CGTTTTT 8730 0.0 40.618553 1 ACTAACG 50 1.0822987E-9 40.5 1 CGGTCTA 290 0.0 40.34483 31 GCGATAC 95 0.0 40.263157 9 TGCACGA 45 1.9299478E-8 40.000004 36 GGGCGAT 3705 0.0 39.838055 7 CGTAAGG 425 0.0 39.70588 2 TACGTAG 185 0.0 38.91892 1 AGTACGG 360 0.0 38.750004 2 AGGGCGA 2085 0.0 38.74101 6 GTCGATC 35 6.2513027E-6 38.571426 9 CGACGGT 305 0.0 38.360657 28 ACGTAAG 65 9.094947E-12 38.076927 1 TAACGGG 615 0.0 38.04878 3 TGGGCGA 1315 0.0 37.98479 6 >>END_MODULE