##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545529_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 531280 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.943845053455806 31.0 31.0 34.0 31.0 34.0 2 32.34917934046077 33.0 31.0 34.0 31.0 34.0 3 32.43362445414847 34.0 31.0 34.0 31.0 34.0 4 36.0879630326758 37.0 35.0 37.0 35.0 37.0 5 36.03054886312302 37.0 35.0 37.0 35.0 37.0 6 36.101389098027404 37.0 35.0 37.0 35.0 37.0 7 36.24691499774131 37.0 35.0 37.0 35.0 37.0 8 36.25318476133113 37.0 36.0 37.0 35.0 37.0 9 38.0056580334287 39.0 39.0 39.0 35.0 39.0 10 37.682001957536514 39.0 37.0 39.0 35.0 39.0 11 37.4221803945189 39.0 37.0 39.0 35.0 39.0 12 36.73386914621292 39.0 35.0 39.0 33.0 39.0 13 36.48557257943081 39.0 35.0 39.0 33.0 39.0 14 37.61483963258545 40.0 35.0 41.0 33.0 41.0 15 37.741191085679866 40.0 35.0 41.0 33.0 41.0 16 37.864192139737995 40.0 35.0 41.0 34.0 41.0 17 37.82504705616624 40.0 35.0 41.0 34.0 41.0 18 37.73833571751242 39.0 36.0 41.0 34.0 41.0 19 37.652367866285196 39.0 36.0 41.0 34.0 41.0 20 37.485555639210965 39.0 35.0 41.0 34.0 41.0 21 37.33487991266376 39.0 35.0 41.0 33.0 41.0 22 37.27559667218792 39.0 35.0 41.0 33.0 41.0 23 37.224013702755606 38.0 35.0 41.0 33.0 41.0 24 37.14180281584099 38.0 35.0 41.0 33.0 41.0 25 37.03859170305677 38.0 35.0 41.0 33.0 41.0 26 36.978340987803044 38.0 35.0 41.0 33.0 41.0 27 36.95932464990212 38.0 35.0 41.0 33.0 41.0 28 36.93588691462129 38.0 35.0 41.0 33.0 41.0 29 36.90786402650203 38.0 35.0 41.0 33.0 41.0 30 36.80736334889324 38.0 35.0 41.0 33.0 41.0 31 36.622656602921246 38.0 35.0 41.0 32.0 41.0 32 36.3839519650655 38.0 35.0 41.0 32.0 41.0 33 36.18555187471766 38.0 35.0 41.0 31.0 41.0 34 35.9610883150128 38.0 35.0 41.0 31.0 41.0 35 35.76660894443608 38.0 35.0 40.0 30.0 41.0 36 35.59761519349495 38.0 35.0 40.0 30.0 41.0 37 35.52545362144255 38.0 35.0 40.0 29.0 41.0 38 35.50383037193194 38.0 35.0 40.0 29.0 41.0 39 35.44984565577473 37.0 35.0 40.0 29.0 41.0 40 35.27908823972293 37.0 35.0 40.0 28.0 41.0 41 35.25735770215329 37.0 35.0 40.0 29.0 41.0 42 35.1757058424936 37.0 35.0 40.0 28.0 41.0 43 35.0887027556091 37.0 35.0 40.0 28.0 41.0 44 34.99455654268935 36.0 34.0 40.0 27.0 41.0 45 34.943925990061736 36.0 34.0 40.0 27.0 41.0 46 34.919590423129044 36.0 34.0 40.0 27.0 41.0 47 34.88250451739196 36.0 34.0 40.0 27.0 41.0 48 34.82415110676103 36.0 34.0 40.0 27.0 41.0 49 34.763331953019126 36.0 34.0 40.0 27.0 41.0 50 34.64694699593435 36.0 34.0 40.0 27.0 41.0 51 34.506288586056314 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 3.0 15 14.0 16 21.0 17 63.0 18 123.0 19 281.0 20 513.0 21 758.0 22 1282.0 23 1956.0 24 3175.0 25 5148.0 26 7037.0 27 8295.0 28 8066.0 29 8192.0 30 9068.0 31 11041.0 32 14625.0 33 21113.0 34 44981.0 35 85401.0 36 35291.0 37 46956.0 38 74481.0 39 143297.0 40 97.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.71401144405963 22.982231591627766 28.334776389098025 15.968980575214575 2 32.75937358831501 25.48731365758169 28.48177985243186 13.271532901671435 3 28.737012498117753 24.500451739195906 33.18193796115043 13.580597801535912 4 26.863047733775037 27.020591778346635 31.387592230085833 14.728768257792503 5 22.472707423580786 32.13691462129197 31.379686794157507 14.010691160969731 6 20.655586508056015 41.856271645836465 27.555338051498268 9.932803794609246 7 84.90984038548412 4.700158108718567 8.698614666465893 1.6913868393314258 8 85.95580484866737 3.733436229483512 8.669816292726999 1.64094262912212 9 81.641507303117 5.792237614817046 9.971013401596144 2.5952416804698086 10 47.83711037494353 24.33330823671134 15.988555940370427 11.841025447974703 11 41.3768634241831 21.267504893841288 22.555714500828188 14.799917181147418 12 37.57660743863876 21.058951965065503 27.9641620237916 13.40027857250414 13 21.350888420418613 36.42504893841289 26.21630778497214 16.007754856196357 14 14.854690558650804 39.744014455654266 29.714463183255535 15.686831802439391 15 15.501806956783618 23.261180545098632 46.73863123023641 14.498381267881344 16 16.58485167896401 18.61410179189881 45.28911308537871 19.51193344375847 17 16.762535762686344 19.04438337599759 31.006813732871557 33.18626712844451 18 20.776238518295436 23.659652160819153 35.9471465140792 19.616962806806203 19 27.432615569944286 24.20305676855895 28.0499924710134 20.31433519048336 20 30.39207197711188 22.272436380063244 28.038134317120917 19.29735732570396 21 22.173994880289115 25.717700647492848 29.97929528685439 22.12900918536365 22 22.067271495256737 24.033842794759824 26.710962204487277 27.18792350549616 23 19.689617527480802 27.87042614064147 27.427345279325404 25.012611052552323 24 19.47184159012197 23.433029664207197 39.70524017467249 17.389888570998345 25 17.858003312754104 25.14248607137479 35.9051724137931 21.094338202078 26 18.345128745670834 32.42508658334588 28.466721879235056 20.76306279174823 27 18.24499322391206 32.75335039903629 29.23938412889625 19.762272248155398 28 15.965404306580332 28.67998042463484 36.67275259750038 18.681862671284442 29 16.83123776539678 24.577623851829543 36.452153290167146 22.138985092606536 30 18.59113838277368 30.521946995934346 32.546679716910106 18.34023490438187 31 27.84972142749586 27.609170305676855 26.33168950459268 18.209418762234602 32 27.405511218190032 26.486786628519805 28.163303719319376 17.944398433970786 33 26.65185965968981 29.04061888269839 25.29475982532751 19.012761632284295 34 20.016187321186568 29.113273603372985 27.666202379159767 23.20433669628068 35 21.683293178738143 26.489233549164283 30.377955127239876 21.449518144857702 36 27.959832856497513 27.284106309290767 26.179227525975 18.57683330823671 37 20.644857702153292 33.20828941424484 28.755458515283845 17.391394368318025 38 20.476396627014005 32.382359584399936 25.337110374943535 21.804133413642525 39 21.737690106911607 30.753651558500227 27.848403854841138 19.660254479747024 40 23.447522963409124 27.05748381267881 27.44560307182653 22.04939015208553 41 17.777066706821262 26.515208552928776 29.53433217888872 26.17339256136124 42 22.407769914169553 26.767617828640265 26.166051799427798 24.658560457762384 43 22.38292425839482 26.397944586658635 27.933669628068063 23.285461526878482 44 19.054547507905436 30.318852582442403 29.33613160668574 21.29046830296642 45 17.813017617828642 36.56847613311248 24.720109923204337 20.89839632585454 46 21.307220298147868 33.052062942327964 26.95113687697636 18.68957988254781 47 22.270554133413643 29.03854841138383 27.365607589218495 21.325289865984036 48 22.20768709531697 26.65562415298901 29.897417557596746 21.239271194097277 49 20.612106610450233 27.246461376298754 31.302514681523867 20.83891733172715 50 20.031809968378255 33.04491040505948 27.75391507303117 19.169364553531096 51 18.94537720222858 32.561173016112036 26.295173919590425 22.198275862068968 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 919.0 1 1432.0 2 1945.0 3 4579.5 4 7214.0 5 5215.0 6 3216.0 7 3299.0 8 3382.0 9 3656.5 10 3931.0 11 3860.0 12 3789.0 13 3724.5 14 3660.0 15 3667.5 16 3675.0 17 3400.0 18 3125.0 19 3078.0 20 3031.0 21 2978.0 22 2925.0 23 3024.0 24 3123.0 25 3537.0 26 4917.5 27 5884.0 28 6500.0 29 7116.0 30 8064.5 31 9013.0 32 10475.0 33 11937.0 34 13485.0 35 15033.0 36 16027.0 37 17021.0 38 19696.5 39 22372.0 40 27238.5 41 32105.0 42 38984.5 43 45864.0 44 46995.0 45 48126.0 46 47705.0 47 47284.0 48 42373.0 49 37462.0 50 35722.5 51 33983.0 52 29971.5 53 25960.0 54 24116.0 55 22272.0 56 21106.5 57 19941.0 58 19712.0 59 19483.0 60 18499.0 61 17515.0 62 15970.5 63 14426.0 64 12018.0 65 9610.0 66 8015.5 67 6421.0 68 5667.5 69 4914.0 70 4359.0 71 3804.0 72 3113.0 73 2422.0 74 1963.0 75 1138.5 76 773.0 77 676.5 78 580.0 79 421.0 80 262.0 81 218.0 82 174.0 83 129.5 84 85.0 85 52.0 86 19.0 87 17.0 88 15.0 89 10.5 90 6.0 91 5.5 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 531280.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.040260136344106 #Duplication Level Percentage of deduplicated Percentage of total 1 72.29641189037699 13.76542489317059 2 5.849143575185872 2.227384304927296 3 2.672129478542512 1.5263412116832884 4 1.6715416307885798 1.2730634991577365 5 1.2286352278970116 1.1696767175917764 6 1.0426887728759977 1.1911839286082648 7 0.9387197010302093 1.2511427111908446 8 0.8287525303897864 1.2623731013819965 9 0.7337808889868578 1.2574241108448847 >10 10.721798411521936 46.912236072918574 >50 1.9114292366271304 23.853940681258404 >100 0.09897044687556794 2.6884435574980143 >500 0.003998805934366381 0.5209763535026951 >1k 0.0019994029671831907 1.1003888562656488 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3939 0.7414169552778196 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1842 0.34670983285649754 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 949 0.17862520704713147 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 659 0.1240400542087035 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 586 0.11029965366661648 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 543 0.10220599307333234 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00828188525824424 0.0 2 0.0 0.0 0.0 0.0570320734829092 0.0 3 0.0 0.0 0.0 0.08056015660292125 0.0 4 0.0 0.0 0.0 0.1197108869146213 0.0 5 0.0 0.0 0.0 0.19142448426441802 0.0 6 0.0 0.0 0.0 0.263702755609095 0.0 7 0.0 0.0 0.0 0.30454750790543594 0.0 8 0.0 0.0 0.0 0.37946092455955427 0.0 9 0.0 0.0 0.0 0.4169176328866135 0.0 10 0.0 0.0 0.0 0.48392561361240777 0.0 11 0.0 0.0 0.0 0.5851904833609396 0.0 12 0.0 0.0 0.0 0.6665035386237013 0.0 13 0.0 0.0 0.0 0.7028308989609998 0.0 14 0.0 0.0 0.0 0.7171359734979672 0.0 15 0.0 0.0 0.0 0.7387818099683783 0.0 16 0.0 0.0 0.0 0.789037795512724 0.0 17 0.0 0.0 0.0 0.8487050143050745 0.0 18 0.0 0.0 0.0 0.9191010390001506 0.0 19 0.0 0.0 0.0 0.9620162626110526 0.0 20 0.0 0.0 0.0 1.0030492395723536 0.0 21 0.0 0.0 0.0 1.0636575816895046 0.0 22 0.0 0.0 0.0 1.1206896551724137 0.0 23 0.0 0.0 0.0 1.193156151182051 0.0 24 0.0 0.0 0.0 1.2475530793555187 0.0 25 0.0 0.0 0.0 1.2921623249510616 0.0 26 0.0 0.0 0.0 1.3362068965517242 0.0 27 0.0 0.0 0.0 1.378557446167746 0.0 28 0.0 0.0 0.0 1.4184610751392863 0.0 29 0.0 0.0 0.0 1.468905285348592 0.0 30 0.0 0.0 0.0 1.535348592079506 0.0 31 0.0 0.0 0.0 1.5965216081915374 0.0 32 0.0 0.0 0.0 1.6593886462882097 0.0 33 0.0 0.0 0.0 1.7209381117301612 0.0 34 0.0 0.0 0.0 1.7868167444661949 0.0 35 0.0 0.0 0.0 1.87528233699744 0.0 36 0.0 0.0 0.0 1.9503839783165187 0.0 37 0.0 0.0 0.0 2.028873663604879 0.0 38 0.0 0.0 0.0 2.097575666315314 0.0 39 0.0 0.0 0.0 2.1730537569643125 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCTTA 25 3.887964E-5 45.0 40 CTCGTTA 20 7.0298585E-4 45.0 17 CGTATTC 20 7.0298585E-4 45.0 22 ACGTTAG 20 7.0298585E-4 45.0 1 CAACCGG 20 7.0298585E-4 45.0 41 TACGGGT 55 1.8189894E-12 45.0 4 TACGCGG 20 7.0298585E-4 45.0 2 TCGTAAG 20 7.0298585E-4 45.0 1 CTATTAC 20 7.0298585E-4 45.0 13 ACGTATT 20 7.0298585E-4 45.0 21 CGGTCTA 45 3.8380676E-10 45.0 31 ATAACGG 50 2.1827873E-11 45.0 2 CGCACAG 25 3.887964E-5 45.0 43 GATTCGT 25 3.887964E-5 45.0 9 GCGTATG 45 3.8380676E-10 45.0 1 ACGACTA 20 7.0298585E-4 45.0 12 GTCGGAT 20 7.0298585E-4 45.0 19 TACGGGC 30 2.1632895E-6 44.999996 4 CTCGAGG 60 0.0 44.999996 2 AAGGGTA 205 0.0 42.80488 5 >>END_MODULE