SRR1545528_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545528_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1271497
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5416	0.4259546031174277	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4652	0.36586794935418643	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCTAT	35	1.2120654E-7	45.000004	40
ATACGTA	35	1.2120654E-7	45.000004	44
GACTACG	35	1.2120654E-7	45.000004	1
ACTATCG	20	7.033569E-4	45.0	9
CCTTACG	20	7.033569E-4	45.0	32
TACCCGT	20	7.033569E-4	45.0	17
CTACTAT	25	3.8910406E-5	45.0	39
CGTGCTA	20	7.033569E-4	45.0	25
AACCCGC	25	3.8910406E-5	45.0	33
CGGTTAC	25	3.8910406E-5	45.0	38
GGCGTAG	55	1.8189894E-12	45.0	1
ACTTACG	20	7.033569E-4	45.0	25
TTATCGT	25	3.8910406E-5	45.0	31
ATCGTCC	25	3.8910406E-5	45.0	21
ATATCGT	40	6.8157533E-9	45.0	37
GTAGCGT	25	3.8910406E-5	45.0	35
ATATCGA	40	6.8157533E-9	45.0	36
TACGCAT	40	6.8157533E-9	45.0	40
CGTAGAT	20	7.033569E-4	45.0	39
GTCGTTG	25	3.8910406E-5	45.0	11