##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545528_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1271497 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.37057735881406 31.0 31.0 33.0 30.0 34.0 2 31.72543309185944 31.0 31.0 34.0 30.0 34.0 3 31.82643922872016 31.0 31.0 34.0 30.0 34.0 4 35.533417695834125 37.0 35.0 37.0 33.0 37.0 5 35.39340242249883 37.0 35.0 37.0 33.0 37.0 6 35.474364469597646 37.0 35.0 37.0 33.0 37.0 7 35.88039138118297 37.0 35.0 37.0 35.0 37.0 8 35.8945903922699 37.0 35.0 37.0 35.0 37.0 9 37.62493737696589 39.0 37.0 39.0 35.0 39.0 10 37.018121946021104 39.0 37.0 39.0 33.0 39.0 11 36.60622242915241 39.0 35.0 39.0 32.0 39.0 12 35.46949147343643 37.0 35.0 39.0 31.0 39.0 13 34.98227758303795 37.0 34.0 39.0 30.0 39.0 14 35.88798793862667 37.0 35.0 40.0 30.0 41.0 15 36.22000209202224 37.0 35.0 40.0 31.0 41.0 16 36.4570156280353 37.0 35.0 40.0 32.0 41.0 17 36.42744811824173 37.0 35.0 40.0 32.0 41.0 18 36.38446178009071 37.0 35.0 40.0 31.0 41.0 19 36.31071563676517 37.0 35.0 40.0 31.0 41.0 20 36.12073249091425 36.0 35.0 40.0 31.0 41.0 21 35.909525543512885 36.0 34.0 40.0 31.0 41.0 22 35.814634246089454 36.0 34.0 40.0 30.0 41.0 23 35.78950874441701 35.0 34.0 40.0 30.0 41.0 24 35.732371370125136 35.0 34.0 40.0 30.0 41.0 25 35.64186781408057 35.0 34.0 40.0 30.0 41.0 26 35.52300241369032 35.0 34.0 40.0 30.0 41.0 27 35.45215442899197 35.0 34.0 40.0 30.0 41.0 28 35.4653711333963 36.0 34.0 40.0 30.0 41.0 29 35.491401080773294 36.0 34.0 40.0 30.0 41.0 30 35.41120427338798 36.0 34.0 40.0 30.0 41.0 31 35.18252972677089 35.0 34.0 40.0 29.0 41.0 32 34.99369640667654 35.0 34.0 40.0 29.0 41.0 33 34.82598464644431 35.0 34.0 40.0 27.0 41.0 34 34.682728311588626 35.0 34.0 40.0 27.0 41.0 35 34.52745700540387 35.0 34.0 40.0 26.0 41.0 36 34.306239810239425 35.0 33.0 40.0 24.0 41.0 37 34.23793528415718 35.0 33.0 40.0 24.0 41.0 38 34.26874935607398 35.0 33.0 40.0 25.0 41.0 39 34.24417281362048 35.0 33.0 40.0 25.0 41.0 40 34.009970924036786 35.0 33.0 40.0 23.0 41.0 41 34.00157294905139 35.0 33.0 40.0 23.0 41.0 42 33.96426888934854 35.0 33.0 39.0 24.0 41.0 43 33.88068709560463 35.0 33.0 39.0 23.0 41.0 44 33.850617815063664 35.0 33.0 39.0 23.0 41.0 45 33.81301725446462 35.0 33.0 39.0 23.0 41.0 46 33.81588395411078 35.0 33.0 39.0 23.0 41.0 47 33.75372179407423 35.0 33.0 39.0 23.0 41.0 48 33.73289280273567 35.0 33.0 39.0 23.0 41.0 49 33.70304530801095 35.0 33.0 39.0 24.0 41.0 50 33.53442910207417 35.0 33.0 39.0 24.0 41.0 51 33.3473700685098 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 5.0 14 11.0 15 59.0 16 146.0 17 366.0 18 699.0 19 1519.0 20 2529.0 21 4048.0 22 5943.0 23 8666.0 24 12117.0 25 16792.0 26 21752.0 27 25657.0 28 28305.0 29 31825.0 30 37893.0 31 45999.0 32 57800.0 33 76418.0 34 138583.0 35 226952.0 36 79176.0 37 95280.0 38 131928.0 39 220888.0 40 138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.00684390132261 23.83135784040387 27.338169103033668 14.823629155239848 2 31.203140864665823 25.95303016837633 29.93384962764364 12.909979339314209 3 28.464400623831594 25.163331097124097 31.72473077010799 14.647537508936317 4 26.473361714577383 27.992515908413466 30.149107705326873 15.385014671682276 5 23.19698748797677 33.31537549832992 29.238291557117318 14.249345456575988 6 21.09741509417639 41.004186403900285 27.0153213102351 10.883077191688223 7 87.04975316497011 4.504218256118575 6.746063891617518 1.6999646872937961 8 88.43929635697135 3.54141614176046 6.45380995786856 1.5654775433996304 9 85.19343734196777 4.7077578633689265 7.56871624549645 2.530088549166848 10 57.49639991285862 19.039368555332807 12.992165927249532 10.472065604559036 11 50.90047400819664 19.59745087876731 17.437005356677997 12.065069756358056 12 45.96959332188751 19.965520956793448 22.042914768969176 12.021970952349868 13 21.82498267789857 43.453504019278064 21.63190318183999 13.089610120983378 14 14.975811975962191 46.00577115006956 25.52463749422924 13.493779379739001 15 13.266016357097184 21.98070463398655 51.30236249082773 13.45091651808852 16 14.463817059733527 16.60963415564488 50.24361048433461 18.682938300286985 17 15.227090586922346 16.30338097533852 28.677299277937742 39.7922291598014 18 21.726673362186464 21.811691258414296 36.64090438278659 19.820730996612653 19 31.52237087464618 23.37811257124476 24.371823134462765 20.72769341964629 20 33.70027613120597 21.126593299079747 25.040405128757676 20.132725440956605 21 22.231039475515868 27.525035450339246 28.230267157531635 22.01365791661325 22 22.601390329666526 23.506150624028212 24.920782353399183 28.97167669290608 23 19.17008062150363 31.002747155518257 24.378193578120907 25.448978644857206 24 19.470749832677544 21.44283470586246 42.11657597304595 16.969839488414053 25 16.686944601520885 23.515195081073724 38.18978731369402 21.60807300371137 26 16.259417049352063 35.86292378196724 26.735415026539584 21.142244142141113 27 17.504720813340498 36.29383317459656 27.45102819747117 18.750417814591778 28 14.848167160441589 29.220202643026287 39.01519232841289 16.916437868119232 29 15.653517074755191 23.955542168011405 38.6215618283016 21.7693789289318 30 18.282544119254705 31.814074276227156 30.92425699785371 18.979124606664428 31 30.481078602623523 26.719056356405087 24.139577207024477 18.660287833946914 32 31.679272542522714 25.423654165129765 26.63018473500134 16.266888557346185 33 30.04450659340919 27.686498670464815 23.845199792056135 18.42379494406986 34 19.831112460351854 27.305845000027528 27.378515246201918 25.4845272934187 35 20.981646043993813 24.922984482071133 31.18410818114396 22.911261292791096 36 32.95548475537103 24.238201112546864 24.635449395476357 18.17086473660575 37 21.144839508075915 33.8276063569163 27.955787548063427 17.071766586944364 38 20.936030521503394 34.52143418348608 21.9958835923325 22.546651702678027 39 22.060846388155063 32.01667011404667 26.039935603465835 19.88254789433243 40 25.48051627333765 25.571904613223623 24.51873657586294 24.428842537575786 41 16.801927177177767 24.28924330926459 26.916146872544726 31.992682641012916 42 22.55498833265041 25.250000589855894 23.296869752740275 28.898141324753418 43 22.526203365009906 25.2614044704785 26.366715768892888 25.845676395618707 44 19.493872183733032 30.22004770754473 28.402347783754113 21.88373232496813 45 16.83700394102385 39.69887463360118 21.897416981715253 21.566704443659717 46 22.117000669289823 34.35729694997314 24.980003885184157 18.54569849555288 47 22.071070556989124 27.889566392999747 26.035767288479644 24.003595761531486 48 23.90921881844786 24.01271886602957 30.82311637384909 21.254945941673476 49 22.08467656628368 23.311970063633655 32.468735671417235 22.134617698665433 50 19.21852745228656 35.121514246592795 25.156252826392826 20.50370547472782 51 18.38517904485815 35.63484616951514 23.43308714059097 22.546887645035735 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1063.0 1 1762.0 2 2461.0 3 5522.0 4 8583.0 5 6521.0 6 4459.0 7 4780.0 8 5101.0 9 5405.0 10 5709.0 11 5984.5 12 6260.0 13 6102.0 14 5944.0 15 5739.5 16 5535.0 17 5178.5 18 4822.0 19 4857.5 20 4893.0 21 5371.0 22 5849.0 23 5503.5 24 5158.0 25 5335.5 26 6678.5 27 7844.0 28 8383.0 29 8922.0 30 12748.0 31 16574.0 32 19127.0 33 21680.0 34 24208.5 35 26737.0 36 30691.0 37 34645.0 38 41781.0 39 48917.0 40 69419.5 41 89922.0 42 114129.0 43 138336.0 44 138083.5 45 137831.0 46 132561.0 47 127291.0 48 112301.0 49 97311.0 50 93816.0 51 90321.0 52 80463.0 53 70605.0 54 63014.5 55 55424.0 56 49723.5 57 44023.0 58 43778.5 59 43534.0 60 41518.0 61 39502.0 62 35787.0 63 32072.0 64 26916.0 65 21760.0 66 18265.5 67 14771.0 68 12926.5 69 11082.0 70 9592.0 71 8102.0 72 6719.5 73 5337.0 74 4186.5 75 2562.5 76 2089.0 77 1668.5 78 1248.0 79 1000.5 80 753.0 81 519.0 82 285.0 83 209.5 84 134.0 85 88.5 86 43.0 87 27.0 88 11.0 89 6.5 90 2.0 91 2.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1271497.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.160159786105739 #Duplication Level Percentage of deduplicated Percentage of total 1 81.39522407862364 12.339646028578159 2 6.914627901244484 2.096537276886627 3 2.339408729317209 1.0639743042437844 4 1.0903699078510258 0.6612072811593177 5 0.5926933104214333 0.44926626450724494 6 0.42532594217229264 0.38688055467047555 7 0.31742421509156044 0.33685412745370774 8 0.25882189072730766 0.31390249756543875 9 0.2080045004327037 0.283804331651 >10 2.9490955535921786 11.199736993766981 >50 1.5316377455661856 17.051195203448025 >100 1.9664185079222678 52.11755017963981 >500 0.00990507731986296 0.9037414815035479 >1k 5.213198589401558E-4 0.3676611606431574 >5k 5.213198589401558E-4 0.4280423142827473 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5416 0.4259546031174277 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4652 0.36586794935418643 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024773947559451576 0.0 2 0.0 0.0 0.0 0.0701535276921613 0.0 3 0.0 0.0 0.0 0.09744419373384286 0.0 4 0.0 0.0 0.0 0.15320523760575133 0.0 5 0.0 0.0 0.0 0.24671705871110983 0.0 6 0.0 0.0 0.0 0.35454271618415145 0.0 7 0.0 0.0 0.0 0.41077564477147804 0.0 8 0.0 0.0 0.0 0.5488019240312797 0.0 9 0.0 0.0 0.0 0.5973274022667768 0.0 10 0.0 0.0 0.0 0.6844687797139907 0.0 11 0.0 0.0 0.0 0.8093609343946545 0.0 12 0.0 0.0 0.0 0.9132542192392117 0.0 13 0.0 0.0 0.0 0.9565889656051095 0.0 14 0.0 0.0 0.0 0.9706668596150836 0.0 15 0.0 0.0 0.0 0.9970924036784986 0.0 16 7.864745256968754E-5 0.0 0.0 1.0532466848132556 0.0 17 7.864745256968754E-5 0.0 0.0 1.1230069752425684 0.0 18 7.864745256968754E-5 0.0 0.0 1.2194287520930054 0.0 19 7.864745256968754E-5 0.0 0.0 1.2641791526051576 0.0 20 1.572949051393751E-4 0.0 0.0 1.3060195973722313 0.0 21 1.572949051393751E-4 0.0 0.0 1.368780264522842 0.0 22 1.572949051393751E-4 0.0 0.0 1.4305971622426163 0.0 23 1.572949051393751E-4 0.0 0.0 1.509244614812304 0.0 24 1.572949051393751E-4 0.0 0.0 1.5664999602830365 0.0 25 1.572949051393751E-4 0.0 0.0 1.6100706490066434 0.0 26 1.572949051393751E-4 0.0 0.0 1.655764818949632 0.0 27 1.572949051393751E-4 0.0 0.0 1.7005938669143537 0.0 28 2.3594235770906262E-4 0.0 0.0 1.7525798330629172 0.0 29 2.3594235770906262E-4 0.0 0.0 1.8020490807292506 0.0 30 2.3594235770906262E-4 0.0 0.0 1.8746406794510722 0.0 31 2.3594235770906262E-4 0.0 0.0 1.9431426106392702 0.0 32 2.3594235770906262E-4 0.0 0.0 2.0029933220448024 0.0 33 2.3594235770906262E-4 0.0 0.0 2.0635518605234617 0.0 34 2.3594235770906262E-4 0.0 0.0 2.13449186274132 0.0 35 2.3594235770906262E-4 0.0 0.0 2.231621466664884 0.0 36 2.3594235770906262E-4 0.0 0.0 2.3057073669855295 0.0 37 2.3594235770906262E-4 0.0 0.0 2.383411050124381 0.0 38 2.3594235770906262E-4 0.0 0.0 2.461429323073511 0.0 39 2.3594235770906262E-4 0.0 0.0 2.535200633583878 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCTAT 35 1.2120654E-7 45.000004 40 ATACGTA 35 1.2120654E-7 45.000004 44 GACTACG 35 1.2120654E-7 45.000004 1 ACTATCG 20 7.033569E-4 45.0 9 CCTTACG 20 7.033569E-4 45.0 32 TACCCGT 20 7.033569E-4 45.0 17 CTACTAT 25 3.8910406E-5 45.0 39 CGTGCTA 20 7.033569E-4 45.0 25 AACCCGC 25 3.8910406E-5 45.0 33 CGGTTAC 25 3.8910406E-5 45.0 38 GGCGTAG 55 1.8189894E-12 45.0 1 ACTTACG 20 7.033569E-4 45.0 25 TTATCGT 25 3.8910406E-5 45.0 31 ATCGTCC 25 3.8910406E-5 45.0 21 ATATCGT 40 6.8157533E-9 45.0 37 GTAGCGT 25 3.8910406E-5 45.0 35 ATATCGA 40 6.8157533E-9 45.0 36 TACGCAT 40 6.8157533E-9 45.0 40 CGTAGAT 20 7.033569E-4 45.0 39 GTCGTTG 25 3.8910406E-5 45.0 11 >>END_MODULE