##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545526_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1734560 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.343694078037082 31.0 31.0 33.0 30.0 34.0 2 31.682316552901025 31.0 31.0 34.0 30.0 34.0 3 31.758505326999355 31.0 31.0 34.0 30.0 34.0 4 35.46017952679642 37.0 35.0 37.0 33.0 37.0 5 35.32757702241491 37.0 35.0 37.0 33.0 37.0 6 35.40408345632322 37.0 35.0 37.0 33.0 37.0 7 35.879819089567384 37.0 35.0 37.0 35.0 37.0 8 35.919052670417855 37.0 35.0 37.0 35.0 37.0 9 37.64794875933954 39.0 37.0 39.0 35.0 39.0 10 37.01403064754174 39.0 37.0 39.0 32.0 39.0 11 36.53830942717462 39.0 35.0 39.0 32.0 39.0 12 35.31922101282169 35.0 35.0 39.0 31.0 39.0 13 34.74557121114288 35.0 33.0 39.0 27.0 39.0 14 35.62892664422101 37.0 34.0 40.0 27.0 41.0 15 36.04260273498755 37.0 35.0 40.0 30.0 41.0 16 36.31646815330689 37.0 35.0 40.0 32.0 41.0 17 36.25993796697722 36.0 35.0 40.0 31.0 41.0 18 36.22315169264828 36.0 35.0 40.0 31.0 41.0 19 36.13193086431141 36.0 35.0 40.0 31.0 41.0 20 35.93256906650678 36.0 34.0 40.0 31.0 41.0 21 35.70255915044738 35.0 34.0 40.0 30.0 41.0 22 35.61879669772161 35.0 34.0 40.0 30.0 41.0 23 35.64555103311503 35.0 34.0 40.0 30.0 41.0 24 35.57607174153676 35.0 34.0 40.0 30.0 41.0 25 35.47993958121945 35.0 34.0 40.0 30.0 41.0 26 35.33635850013837 35.0 34.0 40.0 30.0 41.0 27 35.2443276681118 35.0 34.0 40.0 29.0 41.0 28 35.288270800664144 36.0 34.0 40.0 29.0 41.0 29 35.31183873720136 36.0 34.0 40.0 30.0 41.0 30 35.23672977585094 36.0 34.0 40.0 29.0 41.0 31 34.99702921778434 35.0 34.0 40.0 29.0 41.0 32 34.75111267410755 35.0 34.0 40.0 28.0 41.0 33 34.521657365556685 35.0 33.0 40.0 27.0 41.0 34 34.377219583064296 35.0 34.0 40.0 26.0 41.0 35 34.20569308643114 35.0 33.0 40.0 25.0 41.0 36 33.97825558066599 35.0 33.0 40.0 23.0 41.0 37 33.87915436767826 35.0 33.0 40.0 23.0 41.0 38 33.90749584909141 35.0 33.0 40.0 24.0 41.0 39 33.8982139562771 35.0 33.0 39.0 23.0 41.0 40 33.68499619500046 35.0 33.0 39.0 23.0 41.0 41 33.739487247486394 35.0 33.0 39.0 23.0 41.0 42 33.66092323125173 35.0 33.0 39.0 23.0 41.0 43 33.516796766903425 35.0 33.0 39.0 23.0 41.0 44 33.45473895397104 35.0 33.0 39.0 23.0 41.0 45 33.42401934784614 35.0 33.0 39.0 23.0 41.0 46 33.41589106171018 35.0 33.0 39.0 23.0 41.0 47 33.3606793653722 35.0 33.0 39.0 23.0 41.0 48 33.373206461581034 35.0 33.0 39.0 23.0 41.0 49 33.37152015496726 35.0 33.0 39.0 23.0 41.0 50 33.188290978692 35.0 32.0 38.0 23.0 40.0 51 32.99914675767918 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 2.0 13 6.0 14 24.0 15 51.0 16 190.0 17 501.0 18 1207.0 19 2318.0 20 3895.0 21 6130.0 22 9291.0 23 12921.0 24 18260.0 25 25559.0 26 32568.0 27 37874.0 28 41213.0 29 46366.0 30 54423.0 31 65708.0 32 82143.0 33 106794.0 34 193371.0 35 314642.0 36 106661.0 37 124489.0 38 170803.0 39 276997.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.653814223780095 24.017330043353937 27.291243888940137 16.037611843925838 2 29.511461119822897 26.43338944746795 30.751660363435107 13.303489069274052 3 26.783103495987454 26.745802970205702 32.89450927036251 13.576584263444333 4 23.70307167235495 28.73431878977954 31.966377640439074 15.596231897426438 5 22.11875057651508 33.13860575592658 31.291047873812378 13.451595793745966 6 20.312240568213262 41.40329536020662 27.061329674384282 11.22313439719583 7 86.65817267779725 4.555391569043446 7.233477077760354 1.5529586753989486 8 88.22352642745133 3.3493796697721607 6.757217968822064 1.6698759339544325 9 85.36251268333179 4.0759616271561665 8.128113181440828 2.433412508071211 10 58.83492067152477 18.123558712295914 13.19395120376349 9.847569412415828 11 51.52972511760908 18.50613412046859 18.2679180887372 11.69622267318513 12 45.90489807213356 19.48805460750853 22.850521169633797 11.756526150724103 13 19.41622082833687 45.41987593395444 23.29680149432709 11.867101743381607 14 13.168872797712389 47.880038741813486 27.353046305691358 11.59804215478277 15 12.09903376072318 21.43344709897611 53.6053523660179 12.862166774282816 16 13.701803339175353 16.351927866432987 51.70417858131169 18.242090213079972 17 13.935003689696524 15.7051355963472 29.10057882114196 41.259281892814315 18 20.14983626971682 20.733442486855456 38.49777465178489 20.618946591642835 19 29.79401116133198 22.407872889954803 26.93259385665529 20.86552209205793 20 33.38431648371921 21.100163730283185 25.573920763767184 19.94159902223042 21 20.61295083479384 28.574508809150444 30.0310741629001 20.781466193155612 22 21.507990499031454 22.68932755280878 26.01184161977677 29.790840328382988 23 17.524271284936813 31.487178304584447 24.326860990683517 26.66168941979522 24 18.097557882114195 21.841677428281525 43.726074624112165 16.334690065492115 25 15.83266073240476 22.940457522368785 39.86382713771792 21.363054607508534 26 15.62920856009593 36.02100820957476 28.606620699197492 19.743162531131812 27 15.791382252559726 37.4275897057467 28.206461581034958 18.574566460658612 28 13.66484872244258 29.6076814869477 40.029978784244996 16.697491006364725 29 13.880061802416751 23.246471727700396 40.244961258186514 22.628505211696336 30 16.47951065399871 33.059738492758974 32.29591366110137 18.164837192140944 31 30.938047689327554 26.645028133935984 24.61108292592934 17.805841250807124 32 31.518137164468225 25.366721243427726 27.248293515358363 15.866848076745688 33 30.23936906189466 27.9700903975648 23.739853334563232 18.050687205977308 34 19.552393690618945 28.55727100820957 26.445784521723088 25.444550779448388 35 19.176967069458538 26.080792823540268 32.90661608707684 21.83562401992436 36 34.96961765519786 22.657215662761736 25.2039710358823 17.1691956461581 37 20.56786735541002 33.92560649386588 28.41262337422747 17.093902776496634 38 20.51211834701596 34.484019001937085 22.693247855363897 22.310614795683055 39 20.006111059865326 33.00531546905267 26.774513421271102 20.214060049810904 40 25.58106955077945 25.287335116686656 24.418469237155243 24.713126095378655 41 16.460370353288443 24.42354256987363 27.85011760907665 31.26596946776128 42 22.690538234480215 24.130211696337977 24.445853703532887 28.73339636564893 43 22.8953163914768 23.811110598653258 26.72026335208929 26.573309657780648 44 18.60863850198321 29.811479568305504 30.52128493681395 21.058596992897336 45 16.2870699197491 40.94219859791532 21.860933032008116 20.90979845032746 46 22.4175006918181 33.47926851766442 26.2159279586754 17.88730283184208 47 21.435349598745503 28.119177197675494 26.126222211973065 24.31925099160594 48 23.492528364542018 24.40976385942256 31.939915598192048 20.157792177843373 49 22.658829904990316 22.421305691356885 33.89251452818006 21.02734987547274 50 20.249515727331428 35.24375057651508 25.26306383174984 19.243669864403653 51 18.673265842634443 35.4353841896504 22.96294161055253 22.928408357162624 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2425.0 1 2806.0 2 3187.0 3 9077.5 4 14968.0 5 11173.0 6 7378.0 7 8123.5 8 8869.0 9 9600.0 10 10331.0 11 10681.0 12 11031.0 13 11020.0 14 11009.0 15 10339.5 16 9670.0 17 8895.0 18 8120.0 19 7951.5 20 7783.0 21 7707.0 22 7631.0 23 7442.0 24 7253.0 25 8643.5 26 10223.5 27 10413.0 28 12190.5 29 13968.0 30 17060.5 31 20153.0 32 21884.5 33 23616.0 34 30320.5 35 37025.0 36 41351.5 37 45678.0 38 59177.5 39 72677.0 40 103985.0 41 135293.0 42 162408.5 43 189524.0 44 194942.0 45 200360.0 46 187869.0 47 175378.0 48 156392.5 49 137407.0 50 126693.0 51 115979.0 52 105180.0 53 94381.0 54 85665.5 55 76950.0 56 70476.0 57 64002.0 58 57272.5 59 50543.0 60 47869.5 61 45196.0 62 39538.0 63 33880.0 64 28577.5 65 23275.0 66 20487.5 67 17700.0 68 14497.0 69 11294.0 70 9430.5 71 7567.0 72 6793.0 73 6019.0 74 4152.0 75 1993.0 76 1701.0 77 1595.0 78 1489.0 79 1168.0 80 847.0 81 489.5 82 132.0 83 121.5 84 111.0 85 63.5 86 16.0 87 12.0 88 8.0 89 6.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1734560.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.78430151095141 #Duplication Level Percentage of deduplicated Percentage of total 1 81.3652978332641 12.84294393528602 2 7.857012502779195 2.4803490863836357 3 2.68326884277067 1.270605733477018 4 1.2800123059295683 0.8081640069808194 5 0.7302670365082988 0.5763377543877976 6 0.4821363621756438 0.4566111425984179 7 0.3335237256985721 0.3685107333237481 8 0.24163888225042715 0.30512807793680213 9 0.1983915578770117 0.2818324950082308 >10 2.0599379304498244 7.635130906479329 >50 0.9625454313068799 11.279344285934112 >100 1.7780250937204762 57.761199330680526 >500 0.0246335155664334 2.461074458275897 >1k 0.002573650880075131 0.4971709319951333 >5k 7.353288228786088E-4 0.9755971212525021 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8536 0.49211327368323954 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8275 0.47706623005257814 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1764 0.10169726040033207 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.765150816345356E-5 0.0 0.0 0.05032976662669495 0.0 2 5.765150816345356E-5 0.0 0.0 0.17900793284752328 0.0 3 5.765150816345356E-5 0.0 0.0 0.24265519785997602 0.0 4 5.765150816345356E-5 0.0 0.0 0.3693732128032469 0.0 5 5.765150816345356E-5 0.0 0.0 0.5801471266488332 0.0 6 5.765150816345356E-5 0.0 0.0 0.7793907388617286 0.0 7 1.1530301632690712E-4 0.0 0.0 0.8881791347661655 0.0 8 1.1530301632690712E-4 0.0 0.0 1.1031616087076839 0.0 9 1.1530301632690712E-4 0.0 0.0 1.18606447744673 0.0 10 1.1530301632690712E-4 0.0 0.0 1.3441449128309197 0.0 11 1.1530301632690712E-4 0.0 0.0 1.5413707222580944 0.0 12 1.1530301632690712E-4 0.0 0.0 1.7072917627525137 0.0 13 1.1530301632690712E-4 0.0 0.0 1.7733027395996679 0.0 14 1.1530301632690712E-4 0.0 0.0 1.8020131906650678 0.0 15 1.1530301632690712E-4 0.0 0.0 1.8476155336223596 0.0 16 1.1530301632690712E-4 0.0 0.0 1.9508117332349415 0.0 17 1.1530301632690712E-4 0.0 0.0 2.077068536112905 0.0 18 1.7295452449036066E-4 0.0 0.0 2.24910063647265 0.0 19 1.7295452449036066E-4 0.0 0.0 2.328313808689235 0.0 20 1.7295452449036066E-4 0.0 0.0 2.4044714509731575 0.0 21 1.7295452449036066E-4 0.0 0.0 2.5025943178673553 0.0 22 1.7295452449036066E-4 0.0 0.0 2.598757033483996 0.0 23 1.7295452449036066E-4 0.0 0.0 2.723976109215017 0.0 24 1.7295452449036066E-4 0.0 0.0 2.8131053408357163 0.0 25 1.7295452449036066E-4 0.0 0.0 2.879923438797159 0.0 26 1.7295452449036066E-4 0.0 0.0 2.952506687574947 0.0 27 1.7295452449036066E-4 0.0 0.0 3.021515542846601 0.0 28 1.7295452449036066E-4 0.0 0.0 3.09461765519786 0.0 29 1.7295452449036066E-4 0.0 0.0 3.17123650954709 0.0 30 1.7295452449036066E-4 0.0 0.0 3.2792754358454017 0.0 31 1.7295452449036066E-4 0.0 0.0 3.3794161055253205 0.0 32 2.3060603265381423E-4 0.0 0.0 3.467161700950097 0.0 33 2.3060603265381423E-4 0.0 0.0 3.5507563877871045 0.0 34 2.3060603265381423E-4 0.0 0.0 3.640462134489438 0.0 35 2.882575408172678E-4 0.0 0.0 3.771619315561295 0.0 36 2.882575408172678E-4 0.0 0.0 3.876602711926944 0.0 37 2.882575408172678E-4 0.0 0.0 3.9744373212803246 0.0 38 2.882575408172678E-4 0.0 0.0 4.0779794299418874 0.0 39 2.882575408172678E-4 0.0 0.0 4.1812332810626325 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAA 20 7.0342806E-4 45.000004 15 CCTTACG 20 7.0342806E-4 45.000004 23 ACCGGAT 40 6.8193913E-9 45.000004 21 CGAACCG 20 7.0342806E-4 45.000004 29 TCACCGA 20 7.0342806E-4 45.000004 44 CGAAACA 30 2.1661435E-6 45.000004 44 ACGTTAC 20 7.0342806E-4 45.000004 37 GCGCGAA 20 7.0342806E-4 45.000004 20 CACATCG 20 7.0342806E-4 45.000004 19 CATTGCG 20 7.0342806E-4 45.000004 1 CGACATA 30 2.1661435E-6 45.000004 41 TCAATCG 40 6.8193913E-9 45.000004 1 TCGGAAT 30 2.1661435E-6 45.000004 1 TACGCCC 40 6.8193913E-9 45.000004 10 ATTCACG 20 7.0342806E-4 45.000004 10 ACGTGCC 30 2.1661435E-6 45.000004 19 TCGTCCA 30 2.1661435E-6 45.000004 33 TTGCGAT 30 2.1661435E-6 45.000004 1 CGTACTC 20 7.0342806E-4 45.000004 31 ACGTCGT 40 6.8193913E-9 45.000004 38 >>END_MODULE