SRR1545524_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545524_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1715676
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7136	0.41592934796546666	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3971	0.2314539575071284	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATGCG	70	0.0	45.000004	1
ACGCCTA	35	1.2123928E-7	45.000004	36
ACCGTAG	35	1.2123928E-7	45.000004	45
TAGTCCG	35	1.2123928E-7	45.000004	1
AATCGTA	35	1.2123928E-7	45.000004	12
ATTTCGC	35	1.2123928E-7	45.000004	36
CGTATGG	80	0.0	45.0	2
CCGATCA	20	7.034261E-4	45.0	10
CCAATCG	25	3.891613E-5	45.0	37
GAATCGT	45	3.8562575E-10	45.0	40
CTAACGC	25	3.891613E-5	45.0	23
TCTCGAC	20	7.034261E-4	45.0	13
GCGATCG	20	7.034261E-4	45.0	9
TCCCGTA	20	7.034261E-4	45.0	11
TCGTACT	40	6.8175723E-9	45.0	18
TTACGTC	45	3.8562575E-10	45.0	32
ATCGGAT	55	1.8189894E-12	45.0	10
TACACGA	40	6.8175723E-9	45.0	22
GTCGGTA	20	7.034261E-4	45.0	25
TACGTCT	45	3.8562575E-10	45.0	33