##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545523_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1175229 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.292748051656314 31.0 31.0 33.0 30.0 34.0 2 31.62500670082171 31.0 31.0 34.0 30.0 34.0 3 31.717832014015993 31.0 31.0 34.0 30.0 34.0 4 35.42262146356157 37.0 35.0 37.0 33.0 37.0 5 35.27586538453357 37.0 35.0 37.0 33.0 37.0 6 35.3513825816075 37.0 35.0 37.0 33.0 37.0 7 35.81929734545353 37.0 35.0 37.0 35.0 37.0 8 35.84767564449142 37.0 35.0 37.0 35.0 37.0 9 37.52943043440895 39.0 37.0 39.0 35.0 39.0 10 36.901805520456016 39.0 37.0 39.0 32.0 39.0 11 36.47109031516411 39.0 35.0 39.0 32.0 39.0 12 35.40155578189442 37.0 35.0 39.0 31.0 39.0 13 34.862599544429216 37.0 34.0 39.0 28.0 39.0 14 35.764807539636955 37.0 34.0 40.0 29.0 41.0 15 36.121815407890715 37.0 35.0 40.0 30.0 41.0 16 36.35734482385986 37.0 35.0 40.0 31.0 41.0 17 36.32073238492243 37.0 35.0 40.0 31.0 41.0 18 36.26778780986514 37.0 35.0 40.0 31.0 41.0 19 36.19099086220643 37.0 35.0 40.0 31.0 41.0 20 36.004262148057954 36.0 34.0 40.0 31.0 41.0 21 35.77206825222999 36.0 34.0 40.0 30.0 41.0 22 35.70252095549038 36.0 34.0 40.0 30.0 41.0 23 35.6961009301166 35.0 34.0 40.0 30.0 41.0 24 35.626346014266154 35.0 34.0 40.0 30.0 41.0 25 35.52118948732545 35.0 34.0 40.0 30.0 41.0 26 35.392368636240256 35.0 34.0 40.0 30.0 41.0 27 35.32211679596062 35.0 34.0 40.0 29.0 41.0 28 35.327800794568546 36.0 34.0 40.0 29.0 41.0 29 35.342195435953336 36.0 34.0 40.0 29.0 41.0 30 35.27485536861327 36.0 34.0 40.0 29.0 41.0 31 35.07809116350941 35.0 34.0 40.0 29.0 41.0 32 34.86974964028287 35.0 34.0 40.0 28.0 41.0 33 34.683588475097196 35.0 34.0 40.0 27.0 41.0 34 34.537808376069684 35.0 34.0 40.0 26.0 41.0 35 34.37243635070271 35.0 33.0 40.0 25.0 41.0 36 34.16759627272642 35.0 33.0 40.0 24.0 41.0 37 34.08013842408586 35.0 33.0 40.0 24.0 41.0 38 34.08659163448145 35.0 33.0 40.0 24.0 41.0 39 34.06028527206187 35.0 33.0 40.0 24.0 41.0 40 33.852374303220905 35.0 33.0 40.0 23.0 41.0 41 33.83420933281939 35.0 33.0 39.0 23.0 41.0 42 33.74853922086674 35.0 33.0 39.0 23.0 41.0 43 33.637481716329326 35.0 33.0 39.0 23.0 41.0 44 33.5739987696015 35.0 33.0 39.0 23.0 41.0 45 33.54218964984697 35.0 33.0 39.0 23.0 41.0 46 33.54068696398745 35.0 33.0 39.0 23.0 41.0 47 33.47517207284708 35.0 33.0 39.0 23.0 41.0 48 33.432475713243974 35.0 33.0 39.0 23.0 41.0 49 33.41538202341842 35.0 33.0 39.0 23.0 41.0 50 33.2600846303146 35.0 32.0 39.0 23.0 40.0 51 33.09670710984838 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 10.0 14 12.0 15 51.0 16 134.0 17 354.0 18 805.0 19 1545.0 20 2632.0 21 4083.0 22 6205.0 23 8671.0 24 12245.0 25 16698.0 26 21753.0 27 25566.0 28 28250.0 29 31640.0 30 37117.0 31 44874.0 32 55404.0 33 71492.0 34 125984.0 35 200505.0 36 74525.0 37 89825.0 38 120872.0 39 193845.0 40 132.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.06440021476666 22.007115209035856 27.7964549887724 15.13202958742509 2 30.76004761625181 25.82620068088858 30.179905363124977 13.23384633973464 3 30.411434707618685 24.259016753330627 31.589332802372983 13.740215736677703 4 26.256669976659868 27.821641569430298 30.433643145293388 15.48804530861645 5 23.184502764993034 32.56709968865643 30.050653957654212 14.19774358869633 6 21.799496098207243 41.25366205224684 26.648168144251034 10.298673705294883 7 86.04637904612633 4.4687460911873345 7.614515979438901 1.8703588832474354 8 87.39632871550992 3.7635218327662097 6.920013035757286 1.9201364159665903 9 83.67705357849407 4.9984300931988574 8.594580290309379 2.729936037997701 10 55.393204218071546 20.35688363714646 13.792460873582934 10.45745127119906 11 49.57927348627374 18.965154876198596 18.735072058296723 12.72049957923094 12 45.432932645467396 18.950689610280207 23.092946140709596 12.523431603542798 13 21.275938561761155 41.8573741798407 22.815553394274648 14.051133864123502 14 14.180640538992826 44.806671721000754 26.425658318506436 14.587029421499981 15 13.696564669523983 22.838102191147428 49.9566467471446 13.508686392183991 16 15.272257577033924 16.51601517661664 49.8498590487471 18.36186819760234 17 14.71849316175826 17.600825030696146 29.513652232883974 38.16702957466162 18 20.79594700266927 21.450627920175556 37.33178810257405 20.421636974581126 19 29.68349147272574 23.314094529661876 25.85062145335079 21.151792544261586 20 33.35205308922772 21.020754253000902 25.796163981658044 19.831028676113334 21 21.41625164116951 27.747187994850364 29.052295339886953 21.784265024093177 22 21.738997250748575 23.83110015154493 25.58973612802271 28.84016646968378 23 18.315749526262543 30.955243616350515 25.008998246299228 25.720008611087714 24 19.218211939970846 22.46991862862472 40.97363152202677 17.338237909377664 25 16.85058826832898 24.41251875166457 38.01633553971184 20.720557440294616 26 16.34175126719984 34.19282539828408 28.18795315636357 21.277470178152512 27 17.740627571307378 34.78768818672786 28.856418621392088 18.61526562057267 28 15.117649411306221 28.404166336943693 39.36177544972087 17.11640880202922 29 15.812492714185916 23.0015596960252 39.50132272093354 21.684624868855344 30 18.071456711840842 31.905441407589503 31.48271528357452 18.54038659699514 31 29.509567922507017 27.381131677315658 24.439407128312865 18.669893271864463 32 31.168053204949842 24.983130947245176 26.91994496391767 16.92887088388731 33 28.861098560365683 27.32233462584739 24.43183413615559 19.384732677631337 34 19.570058260985732 27.691454176164815 27.458903754076864 25.27958380877259 35 19.89391003795856 24.960241791174315 32.102254113879084 23.04359405698804 36 31.632813689927662 25.123529116453046 25.038779676131206 18.20487751748808 37 19.779294078005222 33.70211252445268 29.078077549141483 17.440515848400608 38 20.751530127319867 33.398256850367034 23.78770435378977 22.062508668523325 39 20.535827485536863 32.98540114309637 26.346099355955303 20.132672015411465 40 25.43904209307292 25.938178857056794 25.195259817448346 23.427519232421936 41 17.293055225832582 24.58661248148233 27.09548522032727 31.024847072357815 42 21.54822592022491 24.883405702207824 24.714417360361256 28.853951017206008 43 22.729953055957605 24.919909226201874 26.044711286055737 26.305426431784785 44 18.785189950213958 29.578320480519118 29.126919094065922 22.509570475201006 45 16.133366348175546 39.648613163902525 22.262554787194667 21.95546570072726 46 22.343219917139553 34.37389649166248 24.796614106697504 18.48626948450047 47 21.639357095510746 28.599532516641435 25.750896208313446 24.010214179534373 48 22.584874947776136 24.171714619023184 31.924076073684365 21.319334359516315 49 21.139199253932638 23.601272603041622 33.16272828529589 22.096799857729856 50 19.92828631696461 33.3032966341028 27.21682327444268 19.55159377448991 51 18.24793295604516 34.92485294355398 23.91048893449702 22.916725165903838 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1173.0 1 1925.5 2 2678.0 3 5946.0 4 9214.0 5 7011.0 6 4808.0 7 4971.0 8 5134.0 9 5675.0 10 6216.0 11 6357.0 12 6498.0 13 6608.0 14 6718.0 15 6193.0 16 5668.0 17 5650.5 18 5633.0 19 5405.0 20 5177.0 21 4904.5 22 4632.0 23 5095.0 24 5558.0 25 5964.0 26 6689.5 27 7009.0 28 9737.5 29 12466.0 30 14350.0 31 16234.0 32 18676.0 33 21118.0 34 23440.0 35 25762.0 36 28674.5 37 31587.0 38 36887.0 39 42187.0 40 60966.5 41 79746.0 42 103190.0 43 126634.0 44 126415.5 45 126197.0 46 124308.0 47 122419.0 48 108967.5 49 95516.0 50 87512.0 51 79508.0 52 69814.0 53 60120.0 54 53583.5 55 47047.0 56 44382.5 57 41718.0 58 40100.0 59 38482.0 60 35603.0 61 32724.0 62 30130.5 63 27537.0 64 24010.5 65 20484.0 66 16969.5 67 13455.0 68 11653.0 69 9851.0 70 8534.5 71 7218.0 72 6279.0 73 5340.0 74 5010.5 75 3478.5 76 2276.0 77 1731.5 78 1187.0 79 1010.0 80 833.0 81 505.5 82 178.0 83 172.0 84 166.0 85 105.0 86 44.0 87 30.5 88 17.0 89 11.5 90 6.0 91 5.5 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1175229.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.066698541927355 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68458814104044 13.770195427827039 2 7.236394111666239 2.4700271366877176 3 2.570499246848582 1.3160980724464817 4 1.1896697264724774 0.8121493834465177 5 0.6981285840614299 0.5957375043839507 6 0.4447250786608069 0.4553993310923352 7 0.35135982978674757 0.419758660629933 8 0.2474827769875409 0.33789711593323174 9 0.22392150159981672 0.3439440688373799 >10 3.2140448108069477 14.05488364977487 >50 1.5605609106992875 19.448881772718135 >100 1.5716002483311717 44.50641053121602 >500 0.005017880741798122 0.5393522677036723 >1k 0.002007152296719249 0.9292650773027229 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4990 0.4245980996044175 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3383 0.2878587917759007 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1450 0.12338020930388886 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03420609940700919 0.0 2 0.0 0.0 0.0 0.11997661732309192 0.0 3 0.0 0.0 0.0 0.16439349267249193 0.0 4 0.0 0.0 0.0 0.26684161129447964 0.0 5 0.0 0.0 0.0 0.44459420249159953 0.0 6 0.0 0.0 0.0 0.6196239201040818 0.0 7 0.0 0.0 0.0 0.7230080265207887 0.0 8 0.0 0.0 0.0 0.9539417424178607 0.0 9 0.0 0.0 0.0 1.0225241208309188 0.0 10 0.0 0.0 0.0 1.1636030084349518 0.0 11 0.0 0.0 0.0 1.3272306929117643 0.0 12 0.0 0.0 0.0 1.468735029513397 0.0 13 0.0 0.0 0.0 1.5199590888243908 0.0 14 0.0 0.0 0.0 1.5385086651197342 0.0 15 0.0 0.0 0.0 1.5745867401161817 0.0 16 0.0 0.0 0.0 1.6509122902855529 0.0 17 0.0 0.0 0.0 1.7437452615617892 0.0 18 0.0 0.0 0.0 1.8744431936243915 0.0 19 0.0 0.0 0.0 1.9379201840662543 0.0 20 0.0 0.0 0.0 1.9985892111239596 0.0 21 8.508979951992336E-5 0.0 0.0 2.0864018842285206 0.0 22 8.508979951992336E-5 0.0 0.0 2.1764268921205994 0.0 23 8.508979951992336E-5 0.0 0.0 2.2882348886897788 0.0 24 8.508979951992336E-5 0.0 0.0 2.371112353422184 0.0 25 8.508979951992336E-5 0.0 0.0 2.436886768451085 0.0 26 8.508979951992336E-5 0.0 0.0 2.502235734482386 0.0 27 1.701795990398467E-4 0.0 0.0 2.571243561893044 0.0 28 2.5526939855977007E-4 0.0 0.0 2.6392303117094627 0.0 29 3.403591980796934E-4 0.0 0.0 2.7203208906519496 0.0 30 3.403591980796934E-4 0.0 0.0 2.8248962542619354 0.0 31 3.403591980796934E-4 0.0 0.0 2.924281140101206 0.0 32 3.403591980796934E-4 0.0 0.0 3.010647286613928 0.0 33 3.403591980796934E-4 0.0 0.0 3.099140678114648 0.0 34 3.403591980796934E-4 0.0 0.0 3.1945263433764826 0.0 35 3.403591980796934E-4 0.0 0.0 3.3131415239072557 0.0 36 3.403591980796934E-4 0.0 0.0 3.412781679145086 0.0 37 3.403591980796934E-4 0.0 0.0 3.5107200383925177 0.0 38 3.403591980796934E-4 0.0 0.0 3.598958160494678 0.0 39 3.403591980796934E-4 0.0 0.0 3.695705262548831 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 2.1655433E-6 45.000004 1 TCGTTGA 240 0.0 45.000004 24 GACGTAT 30 2.1655433E-6 45.000004 26 CCGGATA 30 2.1655433E-6 45.000004 19 ACGATAT 30 2.1655433E-6 45.000004 36 CCGACGG 30 2.1655433E-6 45.000004 2 ATACGTA 45 3.8562575E-10 45.000004 44 TGGGACG 60 0.0 45.000004 6 GTACGTA 45 3.8562575E-10 45.000004 23 TACGTAT 45 3.8562575E-10 45.000004 45 CGAAGCA 30 2.1655433E-6 45.000004 40 CTATGCG 25 3.8908605E-5 45.0 1 CCTTAGT 25 3.8908605E-5 45.0 15 ACGTTAG 50 2.1827873E-11 45.0 1 CGTTGTC 20 7.033352E-4 45.0 24 CACGCTA 40 6.8157533E-9 45.0 16 CGCGACA 20 7.033352E-4 45.0 43 ATCGTAC 25 3.8908605E-5 45.0 41 CACCTCG 20 7.033352E-4 45.0 25 CGTTAAT 25 3.8908605E-5 45.0 22 >>END_MODULE