##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545522_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1570982 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.361417890211346 31.0 31.0 33.0 30.0 34.0 2 31.709693682040914 31.0 31.0 34.0 30.0 34.0 3 31.770130402512567 31.0 31.0 34.0 30.0 34.0 4 35.47654778985373 37.0 35.0 37.0 33.0 37.0 5 35.329286395388365 37.0 35.0 37.0 33.0 37.0 6 35.4053973883851 37.0 35.0 37.0 33.0 37.0 7 35.86787563447576 37.0 35.0 37.0 35.0 37.0 8 35.89864619709201 37.0 35.0 37.0 35.0 37.0 9 37.59513030703089 39.0 37.0 39.0 35.0 39.0 10 36.99611262255073 39.0 37.0 39.0 33.0 39.0 11 36.56897532880708 39.0 35.0 39.0 32.0 39.0 12 35.4595908800992 37.0 35.0 39.0 31.0 39.0 13 34.933706433300955 37.0 34.0 39.0 29.0 39.0 14 35.82868358771775 37.0 35.0 40.0 30.0 41.0 15 36.16557541715946 37.0 35.0 40.0 31.0 41.0 16 36.40688817567611 37.0 35.0 40.0 32.0 41.0 17 36.33736032621634 37.0 35.0 40.0 31.0 41.0 18 36.29119748030213 37.0 35.0 40.0 31.0 41.0 19 36.2188153651665 37.0 35.0 40.0 31.0 41.0 20 36.02385323320063 36.0 35.0 40.0 31.0 41.0 21 35.807869218106894 36.0 34.0 40.0 30.0 41.0 22 35.72608788643027 35.0 34.0 40.0 30.0 41.0 23 35.721174399197444 35.0 34.0 40.0 30.0 41.0 24 35.64120658288892 35.0 34.0 40.0 30.0 41.0 25 35.53361082431243 35.0 34.0 40.0 30.0 41.0 26 35.42244150474035 35.0 34.0 40.0 30.0 41.0 27 35.33522726549381 35.0 34.0 40.0 30.0 41.0 28 35.36214673369905 36.0 34.0 40.0 30.0 41.0 29 35.38397002639114 36.0 34.0 40.0 30.0 41.0 30 35.28596890352659 36.0 34.0 40.0 29.0 41.0 31 35.06065887451288 35.0 34.0 40.0 29.0 41.0 32 34.84992062289702 35.0 34.0 40.0 28.0 41.0 33 34.64452870879488 35.0 34.0 40.0 27.0 41.0 34 34.49147985145597 35.0 34.0 40.0 26.0 41.0 35 34.318416124436816 35.0 33.0 40.0 25.0 41.0 36 34.07865526148613 35.0 33.0 40.0 23.0 41.0 37 33.9927185671128 35.0 33.0 40.0 23.0 41.0 38 33.99738953087941 35.0 33.0 40.0 24.0 41.0 39 33.9451916062692 35.0 33.0 40.0 23.0 41.0 40 33.73976404567334 35.0 33.0 40.0 23.0 41.0 41 33.74336179536112 35.0 33.0 39.0 23.0 41.0 42 33.65949959961349 35.0 33.0 39.0 23.0 41.0 43 33.550589376581016 35.0 33.0 39.0 23.0 41.0 44 33.49175547523778 35.0 33.0 39.0 23.0 41.0 45 33.41884375505257 35.0 33.0 39.0 23.0 41.0 46 33.40695310321824 35.0 33.0 39.0 23.0 41.0 47 33.34688557857442 35.0 33.0 39.0 23.0 41.0 48 33.32979308483483 35.0 33.0 39.0 23.0 41.0 49 33.28850807965973 35.0 33.0 39.0 23.0 41.0 50 33.12786651915808 35.0 32.0 38.0 23.0 40.0 51 32.95547752934152 35.0 32.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 4.0 14 14.0 15 68.0 16 188.0 17 456.0 18 1004.0 19 2026.0 20 3458.0 21 5546.0 22 8265.0 23 11916.0 24 16675.0 25 22568.0 26 29057.0 27 34260.0 28 37489.0 29 41754.0 30 49032.0 31 59034.0 32 73350.0 33 95833.0 34 170446.0 35 274814.0 36 100059.0 37 116444.0 38 159300.0 39 257738.0 40 178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.132449639779445 23.229419560504194 28.755771867532538 15.882358932183818 2 31.92620921181783 26.16949143911261 28.53107164817929 13.373227700890272 3 28.997595134762843 24.802703022695358 32.08992846512563 14.109773377416163 4 26.42601888500314 28.756153794250984 30.73599824822945 14.081829072516424 5 23.242086796666033 32.83271227805283 29.933697521677523 13.991503403603605 6 20.932830548026647 40.986529444640354 27.667917264488075 10.41272274284492 7 85.9363761010629 4.626596612819243 7.773227191654647 1.6638000944632085 8 86.67304908649494 3.8908784441833197 7.4054317617897585 2.030640707531977 9 83.3903252869861 5.093947607292764 8.743384710964225 2.77234239475691 10 55.21915591649045 20.400552011417066 14.13033376575925 10.249958306333236 11 50.241504994964934 19.341278257803083 18.09161403504305 12.325602712188937 12 44.20827227810376 19.385008867065313 23.406760866769957 12.99995798806097 13 21.802541340384547 42.87846709892284 21.902096904993183 13.41689465569943 14 14.95994225268017 44.86996031781395 27.100819742046696 13.069277687459183 15 14.247266996057242 21.99044928586069 50.05868940573476 13.703594312347308 16 15.04301131394249 16.674793218509187 49.344422787784964 18.93777267976336 17 14.880246877430805 17.074925110535958 29.889839603509145 38.15498840852409 18 20.791772280013394 21.516223610455114 37.33117247683296 20.360831632698527 19 30.318234072701024 23.16716550539726 26.176238811138514 20.338361610763204 20 32.45645080592903 21.96428730564704 25.048727483828586 20.530534404595343 21 20.953072664104365 28.198349821958494 29.759475283612414 21.089102230324727 22 21.74385193464979 23.359529262588623 25.431609019072148 29.46500978368944 23 18.457818103581072 30.69640517841707 24.593470835439234 26.252305882562627 24 18.190914981839384 23.051123437442314 42.454210169180804 16.303751411537498 25 17.358951280154706 23.640818290725164 38.178540556161686 20.821689872958444 26 16.660661929926633 35.28277217689318 27.152889084661698 20.903676808518494 27 16.649713363997805 35.59480630586474 28.33705287520799 19.418427454929464 28 14.002642932891657 29.215420673184035 39.724898184702305 17.057038209222004 29 15.936401562844132 23.365894707896082 38.72679636049299 21.970907368766795 30 17.997087172227307 31.301568063797042 32.2487463255467 18.452598438428957 31 29.843562816123924 27.043912660998025 25.17718217013308 17.93534235274497 32 31.754342188516482 25.270945179511923 26.50176768416188 16.472944947809715 33 29.61383389497779 26.905846152279274 24.68570613794429 18.79461381479864 34 19.568270037467013 26.648936779670297 28.332087827868175 25.45070535499452 35 20.16910442003791 25.31499406103953 32.8082689680722 21.70763255085036 36 32.0464524736757 25.129759602592515 25.58959937160324 17.23418855212854 37 20.75956312675766 33.71706359461789 28.01979908108432 17.503574197540136 38 21.103679100078804 34.28460669823079 23.718158451210773 20.893555750479635 39 21.196105365943087 32.750725342492785 26.12824335352028 19.92492593804385 40 25.1988883386315 25.510158614166173 26.346005237488402 22.944947809713927 41 17.531518502439873 24.69767317512231 27.31482601328341 30.4559823091544 42 22.17301025727857 24.824345536740715 24.302888257153807 28.699755948826912 43 21.59369107984687 25.52066159892348 26.828060410622147 26.057586910607505 44 18.833252067814907 29.602312438971296 29.333436029184295 22.230999464029505 45 17.14328999313805 39.04284072000825 23.139412163856747 20.67445712299695 46 22.174283346340058 33.56053729450751 25.546377997965603 18.718801361186824 47 22.170909660327105 27.999047729382003 26.24288502350759 23.5871575867833 48 23.14068525291824 23.889516238887524 31.945496511099424 21.02430199709481 49 22.67543485539618 23.253671907125607 33.103816593697445 20.967076643780768 50 19.815503933208657 34.48696420455486 26.37452243246581 19.32300942977068 51 18.7373884614846 34.82102277429022 24.158965538752195 22.28262322547298 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2344.0 1 3331.5 2 4319.0 3 9398.5 4 14478.0 5 10792.0 6 7106.0 7 7439.5 8 7773.0 9 8293.0 10 8813.0 11 9249.0 12 9685.0 13 9601.0 14 9517.0 15 8960.0 16 8403.0 17 8287.5 18 8172.0 19 7612.5 20 7053.0 21 6744.5 22 6436.0 23 7720.5 24 9005.0 25 9358.0 26 9182.0 27 8653.0 28 11962.5 29 15272.0 30 18249.5 31 21227.0 32 24318.5 33 27410.0 34 32209.0 35 37008.0 36 36381.0 37 35754.0 38 46358.5 39 56963.0 40 81890.5 41 106818.0 42 135112.5 43 163407.0 44 166043.5 45 168680.0 46 163085.5 47 157491.0 48 143899.0 49 130307.0 50 119852.5 51 109398.0 52 96469.0 53 83540.0 54 77495.5 55 71451.0 56 63612.0 57 55773.0 58 52137.5 59 48502.0 60 44201.5 61 39901.0 62 37235.5 63 34570.0 64 29438.5 65 24307.0 66 21908.0 67 19509.0 68 16051.0 69 12593.0 70 11743.0 71 10893.0 72 9296.0 73 7699.0 74 6035.0 75 3817.0 76 3263.0 77 2425.5 78 1588.0 79 1329.5 80 1071.0 81 743.5 82 416.0 83 304.0 84 192.0 85 131.0 86 70.0 87 65.5 88 61.0 89 34.0 90 7.0 91 3.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1570982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.712809942363815 #Duplication Level Percentage of deduplicated Percentage of total 1 81.28333669451406 13.584729576565802 2 7.744296217594698 2.5885790164405433 3 2.655058448608379 1.3312046171237748 4 1.3269143579965192 0.8870586989995811 5 0.7355496324149313 0.6146550604863158 6 0.462923118157957 0.46420476550202183 7 0.3170979444230956 0.37097183747802087 8 0.23527380556603492 0.31456691174734397 9 0.2104922520513973 0.31661253025876285 >10 2.242027453819793 9.035953902046655 >50 1.081820346122128 13.204807313822151 >100 1.6814250261030326 53.870641099917606 >500 0.021099332976424086 2.151422452204982 >1k 0.001918121179674917 0.4006508196396749 >5k 7.672484718699669E-4 0.8639413977667818 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8123 0.5170651223247624 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5352 0.3406786328551186 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1590 0.10121058038857224 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.023106566466070268 0.0 2 0.0 0.0 0.0 0.11502359670575474 0.0 3 0.0 0.0 0.0 0.1740312747058846 0.0 4 0.0 0.0 0.0 0.30961525975472665 0.0 5 0.0 0.0 0.0 0.5243217299752638 0.0 6 0.0 0.0 0.0 0.7797033957104537 0.0 7 0.0 0.0 0.0 0.9143962184162517 0.0 8 0.0 0.0 0.0 1.2310134680091815 0.0 9 0.0 0.0 0.0 1.3499836408055599 0.0 10 0.0 0.0 0.0 1.5541234718157177 0.0 11 0.0 0.0 0.0 1.8088049385670872 0.0 12 0.0 0.0 0.0 2.0214744662892383 0.0 13 0.0 0.0 0.0 2.1045435275515567 0.0 14 0.0 0.0 0.0 2.136625371901142 0.0 15 0.0 0.0 0.0 2.180101363351076 0.0 16 0.0 0.0 0.0 2.2809936714742753 0.0 17 0.0 0.0 0.0 2.3953807236492843 0.0 18 0.0 0.0 0.0 2.5600547937532068 0.0 19 0.0 0.0 0.0 2.6360582107242476 0.0 20 0.0 0.0 0.0 2.714544151365197 0.0 21 0.0 0.0 0.0 2.8223111404204504 0.0 22 0.0 0.0 0.0 2.9256223177604834 0.0 23 0.0 0.0 0.0 3.0545225852364952 0.0 24 0.0 0.0 0.0 3.152996024142861 0.0 25 0.0 0.0 0.0 3.2281719332239325 0.0 26 0.0 0.0 0.0 3.3013745542596924 0.0 27 0.0 0.0 0.0 3.370121363580232 0.0 28 0.0 0.0 0.0 3.448925576486554 0.0 29 0.0 0.0 0.0 3.5400150988362693 0.0 30 0.0 0.0 0.0 3.6551023499950985 0.0 31 0.0 0.0 0.0 3.762869339050352 0.0 32 0.0 0.0 0.0 3.854531751477738 0.0 33 0.0 0.0 0.0 3.9488676509342566 0.0 34 0.0 0.0 0.0 4.044222021639968 0.0 35 0.0 0.0 0.0 4.184134509497881 0.0 36 0.0 0.0 0.0 4.2874456868379145 0.0 37 0.0 0.0 0.0 4.39718596393848 0.0 38 0.0 0.0 0.0 4.501388303621557 0.0 39 0.0 0.0 0.0 4.602726192916278 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 70 0.0 45.000004 1 GACGTAT 45 3.8562575E-10 45.000004 14 CACGATA 35 1.2123019E-7 45.000004 14 TCATCGA 280 0.0 45.000004 16 ATAACGG 125 0.0 45.000004 2 GGTACGA 20 7.0340786E-4 45.0 18 CACGGAT 20 7.0340786E-4 45.0 39 ATTACGT 25 3.8914615E-5 45.0 28 CAACCTA 20 7.0340786E-4 45.0 37 CGACATA 20 7.0340786E-4 45.0 41 TCTAGCG 50 2.1827873E-11 45.0 1 ACCTCAT 25 3.8914615E-5 45.0 19 CGTTACG 25 3.8914615E-5 45.0 24 CCGTAAA 25 3.8914615E-5 45.0 39 TCGTGCA 20 7.0340786E-4 45.0 18 GTTCGAC 20 7.0340786E-4 45.0 30 CACTACG 20 7.0340786E-4 45.0 1 GAACGTA 40 6.8175723E-9 45.0 9 CAAGCTA 25 3.8914615E-5 45.0 32 TACTCGA 20 7.0340786E-4 45.0 40 >>END_MODULE