##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545520_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2847052 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07616615362136 31.0 31.0 33.0 30.0 34.0 2 31.342682536181286 31.0 31.0 34.0 30.0 34.0 3 31.432443102549584 31.0 31.0 34.0 30.0 34.0 4 35.190424340686434 37.0 35.0 37.0 32.0 37.0 5 35.054583477927345 37.0 35.0 37.0 32.0 37.0 6 35.10641147404403 37.0 35.0 37.0 32.0 37.0 7 35.75527212007368 37.0 35.0 37.0 35.0 37.0 8 35.764762638687316 37.0 35.0 37.0 35.0 37.0 9 37.45044804239613 39.0 37.0 39.0 35.0 39.0 10 36.66663306465776 39.0 35.0 39.0 32.0 39.0 11 36.27336732873162 38.0 35.0 39.0 31.0 39.0 12 35.27826537766082 37.0 35.0 39.0 30.0 39.0 13 34.81245793894878 37.0 33.0 39.0 27.0 39.0 14 35.71818393201108 38.0 34.0 40.0 27.0 41.0 15 36.129961799082 38.0 34.0 40.0 30.0 41.0 16 36.32007072578934 38.0 35.0 40.0 31.0 41.0 17 36.276923638907896 37.0 35.0 40.0 31.0 41.0 18 36.18980931855126 37.0 35.0 40.0 31.0 41.0 19 36.08903946959873 37.0 35.0 40.0 30.0 41.0 20 35.93055132115606 36.0 34.0 40.0 30.0 41.0 21 35.77667847303105 36.0 34.0 40.0 30.0 41.0 22 35.66326396567397 36.0 34.0 40.0 30.0 41.0 23 35.64122046242921 36.0 34.0 40.0 30.0 41.0 24 35.548430797891996 36.0 34.0 40.0 30.0 41.0 25 35.455153260284675 35.0 34.0 40.0 30.0 41.0 26 35.25996082965818 35.0 34.0 40.0 29.0 41.0 27 35.17916989222536 35.0 34.0 40.0 29.0 41.0 28 35.21172848265504 36.0 34.0 40.0 29.0 41.0 29 35.229361107559676 36.0 34.0 40.0 29.0 41.0 30 35.147899651990905 36.0 34.0 40.0 29.0 41.0 31 34.9561669404001 36.0 34.0 40.0 28.0 41.0 32 34.74321473580391 35.0 34.0 40.0 27.0 41.0 33 34.512210525132666 35.0 33.0 40.0 26.0 41.0 34 34.373946102846034 35.0 33.0 40.0 25.0 41.0 35 34.18848092693776 35.0 33.0 40.0 24.0 41.0 36 33.964034727851825 35.0 33.0 40.0 23.0 41.0 37 33.8735699242585 35.0 33.0 40.0 23.0 41.0 38 33.85908230689148 35.0 33.0 40.0 23.0 41.0 39 33.82507906423908 35.0 33.0 40.0 23.0 41.0 40 33.664883886911795 35.0 33.0 40.0 23.0 41.0 41 33.64498751691223 35.0 33.0 40.0 23.0 41.0 42 33.564648626017366 35.0 33.0 39.0 23.0 41.0 43 33.48970619433716 35.0 33.0 39.0 23.0 41.0 44 33.36386479769249 35.0 32.0 39.0 23.0 41.0 45 33.29447582973546 35.0 32.0 39.0 23.0 41.0 46 33.24926941973663 35.0 32.0 39.0 23.0 41.0 47 33.16932145953077 35.0 32.0 39.0 23.0 41.0 48 33.12933518600995 35.0 32.0 39.0 23.0 41.0 49 33.10945989044106 35.0 32.0 39.0 22.0 41.0 50 33.00771043170269 35.0 32.0 39.0 22.0 40.0 51 32.83365038643481 35.0 32.0 39.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 7.0 14 26.0 15 115.0 16 403.0 17 1025.0 18 2351.0 19 4503.0 20 7610.0 21 11619.0 22 17000.0 23 24195.0 24 32977.0 25 44697.0 26 55616.0 27 64756.0 28 70672.0 29 80953.0 30 95998.0 31 116134.0 32 142781.0 33 182392.0 34 294899.0 35 426773.0 36 201439.0 37 229847.0 38 303525.0 39 434442.0 40 296.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.06941776967896 25.050894750078328 28.33299145923573 14.54669602100699 2 30.12754947925082 26.81064483542977 30.213954645015267 12.847851040304144 3 28.071738766977212 25.718743458145475 32.9340314121414 13.275486362735911 4 24.491895476443702 28.732035804052753 31.91905170681814 14.857017012685404 5 22.056147903164398 33.163321217877304 30.581141475463042 14.199389403495264 6 19.89946091606335 41.99909239451896 27.330410543959154 10.771036145458531 7 86.58099676437241 4.719759245703977 7.1848002776205 1.5144437123031123 8 87.55498670203424 3.7444345940994403 6.756989334933117 1.9435893689331982 9 83.27498057639973 5.510296264346419 8.646768657544717 2.5679545017091363 10 50.75752041058611 25.845857399162362 13.031374207425786 10.365247982825744 11 44.94543829898435 20.286176718935938 21.8380977937881 12.930287188291608 12 40.705719459988785 20.96122585748346 24.631443331558398 13.701611350969353 13 20.25691838434985 42.032284622830915 24.518660003400008 13.19213698941923 14 14.654632230110304 43.31564720279082 27.955478157757568 14.074242409341311 15 13.168006766297207 22.81904229357244 49.20486173066035 14.808089209470007 16 14.673353349359267 18.853010060933205 46.96573859557184 19.50789799413569 17 15.174643806997553 18.74103458595066 29.80135241646447 36.282969190587316 18 19.831741745496746 22.53313251742504 36.9394728301415 20.69565290693672 19 28.659258770124325 24.136580575275758 26.579388082830942 20.624772571768972 20 30.44208535706408 23.599885074104723 25.743014177471995 20.215015391359202 21 20.841944579867175 29.72249892169163 29.099819743369633 20.33573675507156 22 22.467029053210126 25.403786091718732 25.208777359879626 26.92040749519152 23 18.0508469813688 31.54059005595964 25.369996754537677 25.03856620813389 24 17.94779301537169 24.516798428690446 40.927633214988695 16.607775340949164 25 16.16830321328869 25.985089137816942 37.67595393410447 20.170653714789896 26 15.95924486100008 34.70635590779515 28.72704818879318 20.60735104241159 27 16.64876510861059 34.56550846278888 29.156404589730005 19.629321838870524 28 14.477571888395435 29.24828910746976 38.61158840793916 17.662550596195643 29 14.809775163923947 24.420804396969213 38.275802479196024 22.493617959910814 30 17.19518997194291 31.786493537877075 31.426928626523154 19.591387863656866 31 27.909465650785442 27.719444534205905 25.24344479833877 19.127645016669874 32 29.655798348607615 26.00244041907208 26.935616209328106 17.406145022992202 33 27.597493828704216 27.77711822615112 24.8435926003459 19.781795344798763 34 19.38475307089579 27.515444045279118 28.40120236651807 24.698600517307025 35 18.916198228904847 25.64442096596761 32.7946240532312 22.64475675189635 36 30.753038581662718 24.628071422650518 26.000578844362522 18.618311151324246 37 19.815373937673073 33.27589380172895 28.764841667802344 18.143890592795636 38 20.03194883690217 33.00940762585299 26.010448702728294 20.948194834516546 39 20.19436244929843 33.006105965047354 26.593367455178196 20.206164130476015 40 24.512934783066836 26.401028151224494 25.654325948384503 23.431711117324166 41 17.517242396696652 24.688660410839 27.527034982149956 30.26706221031439 42 20.839450772237388 25.887549647846264 25.379058759727606 27.893940820188746 43 21.06888107417778 26.239598012259695 26.6173220580446 26.074198855517917 44 19.230453114309118 29.303328495580693 29.80068505949312 21.665533330617073 45 16.53587640829883 37.09461576395513 24.111958615438002 22.257549212308028 46 21.124903935720177 33.028163869153076 26.376300819233368 19.47063137589338 47 21.0464368055097 27.53982013675901 27.68828950085914 23.72545355687216 48 22.175042816218323 24.038057611873615 32.05385781503113 21.73304175687694 49 20.897545952796083 24.135035117026312 32.635968714305186 22.331450215872415 50 19.747163030390734 33.75105196533116 26.661753982716156 19.840031021561952 51 17.85650560650104 33.9953397408969 24.850266170059417 23.297888482542646 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5058.0 1 5139.0 2 5220.0 3 15639.5 4 26059.0 5 18895.0 6 11731.0 7 12944.0 8 14157.0 9 15786.0 10 17415.0 11 18021.0 12 18627.0 13 18727.0 14 18827.0 15 18399.0 16 17971.0 17 17464.0 18 16957.0 19 16087.5 20 15218.0 21 15231.0 22 15244.0 23 15698.5 24 16153.0 25 16839.5 26 19229.0 27 20932.0 28 26039.5 29 31147.0 30 33183.0 31 35219.0 32 47532.5 33 59846.0 34 67065.5 35 74285.0 36 78583.0 37 82881.0 38 98991.5 39 115102.0 40 163815.0 41 212528.0 42 257313.5 43 302099.0 44 301692.5 45 301286.0 46 288304.0 47 275322.0 48 254258.0 49 233194.0 50 213239.5 51 193285.0 52 171839.0 53 150393.0 54 137654.5 55 124916.0 56 114176.0 57 103436.0 58 93048.5 59 82661.0 60 73724.0 61 64787.0 62 59319.5 63 53852.0 64 43848.5 65 33845.0 66 29106.0 67 24367.0 68 21627.5 69 18888.0 70 16533.5 71 14179.0 72 11872.0 73 9565.0 74 7290.0 75 4122.0 76 3229.0 77 2870.5 78 2512.0 79 1740.0 80 968.0 81 853.0 82 738.0 83 510.0 84 282.0 85 171.5 86 61.0 87 54.0 88 47.0 89 30.5 90 14.0 91 9.0 92 4.0 93 3.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2847052.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.859749689136297 #Duplication Level Percentage of deduplicated Percentage of total 1 80.57424305021136 14.390358122684049 2 7.788914633625222 2.7821613141319443 3 2.8044820506503494 1.5026204229687272 4 1.4501354477551343 1.0359622444900112 5 0.8784668347211935 0.7844598889164192 6 0.6005287133552994 0.6435175500998837 7 0.4474167338949829 0.5593525611866708 8 0.3516489011021683 0.5024289081715656 9 0.2759054382898369 0.44348418591551353 >10 2.5087198354441473 10.101985947369085 >50 0.8043493298316147 10.535766058800682 >100 1.4960319237533906 53.30467454174058 >500 0.016787155938628066 1.9444551290929288 >1k 0.001974959522191537 0.6014629648138412 >5k 1.974959522191537E-4 0.28993816389689037 >10k+ 1.974959522191537E-4 0.577371995721192 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16369 0.5749455928448093 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8220 0.2887197002372981 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4265 0.1498040780428317 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.042324481604129466 0.0 2 0.0 0.0 0.0 0.1597793085619792 0.0 3 0.0 0.0 0.0 0.23424229694434806 0.0 4 0.0 0.0 0.0 0.3584058176668357 0.0 5 0.0 0.0 0.0 0.5775798966790913 0.0 6 0.0 0.0 0.0 0.9223575825099085 0.0 7 0.0 0.0 0.0 1.0828744961454866 0.0 8 0.0 0.0 0.0 1.521890011141349 0.0 9 0.0 0.0 0.0 1.7401508648243869 0.0 10 3.512405112375889E-5 0.0 0.0 2.1089182775727315 0.0 11 3.512405112375889E-5 0.0 0.0 2.429425244077031 0.0 12 3.512405112375889E-5 0.0 0.0 2.696930017435579 0.0 13 3.512405112375889E-5 0.0 0.0 2.8243249508614525 0.0 14 3.512405112375889E-5 0.0 0.0 2.880207316199353 0.0 15 3.512405112375889E-5 0.0 0.0 2.945011190522688 0.0 16 3.512405112375889E-5 0.0 0.0 3.080344159502531 0.0 17 3.512405112375889E-5 0.0 0.0 3.239877599706644 0.0 18 3.512405112375889E-5 0.0 0.0 3.489714975349941 0.0 19 7.024810224751778E-5 0.0 0.0 3.591574723608842 0.0 20 1.0537215337127668E-4 0.0 0.0 3.7008456466548556 0.0 21 1.0537215337127668E-4 0.0 0.0 3.8342819168740156 0.0 22 1.0537215337127668E-4 0.0 0.0 3.981381442980318 0.0 23 1.0537215337127668E-4 0.0 0.0 4.14857192632941 0.0 24 1.0537215337127668E-4 0.0 0.0 4.275791239499665 0.0 25 1.0537215337127668E-4 0.0 0.0 4.3773348712984514 0.0 26 1.0537215337127668E-4 0.0 0.0 4.483444629743327 0.0 27 1.0537215337127668E-4 0.0 0.0 4.588992403370223 0.0 28 1.0537215337127668E-4 0.0 0.0 4.6993170479499495 0.0 29 1.0537215337127668E-4 0.0 0.0 4.813961950817899 0.0 30 1.0537215337127668E-4 0.0 0.0 4.98824749249399 0.0 31 1.0537215337127668E-4 0.0 0.0 5.124915175416536 0.0 32 1.0537215337127668E-4 0.0 0.0 5.2431076074479845 0.0 33 1.0537215337127668E-4 0.0 0.0 5.365304181307542 0.0 34 1.0537215337127668E-4 0.0 0.0 5.49199663371094 0.0 35 1.0537215337127668E-4 0.0 0.0 5.66673878805164 0.0 36 1.0537215337127668E-4 0.0 0.0 5.802914734258454 0.0 37 1.0537215337127668E-4 0.0 0.0 5.9422869691175295 0.0 38 1.0537215337127668E-4 0.0 0.0 6.074774889956347 0.0 39 1.0537215337127668E-4 0.0 0.0 6.212004557696874 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCTA 20 7.035044E-4 45.000004 12 ACATTCG 20 7.035044E-4 45.000004 22 CCGTCTA 20 7.035044E-4 45.000004 35 CTCGAAT 20 7.035044E-4 45.000004 37 ATCGATC 20 7.035044E-4 45.000004 18 TCGTTAA 35 1.2127748E-7 45.0 35 CGTAAGT 30 2.1666365E-6 44.999996 20 GCGTAAG 190 0.0 43.81579 1 CGTAAGG 485 0.0 43.144333 2 CGTTTTT 12465 0.0 42.220215 1 TGTCACG 80 0.0 42.187504 1 CGACGGT 370 0.0 41.959457 28 CGGTCTA 375 0.0 41.4 31 CGTTAGG 305 0.0 41.311478 2 AGCTACG 270 0.0 40.833332 9 TATTGCG 155 0.0 40.64516 1 ACGTAAG 140 0.0 40.17857 1 AAGGGAC 1965 0.0 40.076336 5 GTCGACG 90 0.0 40.0 1 ATCGCAA 45 1.9299478E-8 40.0 10 >>END_MODULE