##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545518_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1238206 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.06559490101001 31.0 31.0 33.0 30.0 34.0 2 31.32304398460353 31.0 31.0 34.0 28.0 34.0 3 31.438411702091575 31.0 31.0 34.0 30.0 34.0 4 35.20217395166878 37.0 35.0 37.0 32.0 37.0 5 35.052952416641496 37.0 35.0 37.0 32.0 37.0 6 35.10345209117061 37.0 35.0 37.0 32.0 37.0 7 35.72350965832826 37.0 35.0 37.0 35.0 37.0 8 35.72458298538369 37.0 35.0 37.0 35.0 37.0 9 37.38107390854187 39.0 37.0 39.0 35.0 39.0 10 36.630148779766856 39.0 35.0 39.0 32.0 39.0 11 36.242266634146496 38.0 35.0 39.0 32.0 39.0 12 35.19133003716667 37.0 35.0 39.0 30.0 39.0 13 34.62877178757008 37.0 33.0 39.0 27.0 39.0 14 35.52728463599757 37.0 33.0 40.0 27.0 41.0 15 35.93477256611582 37.0 34.0 40.0 30.0 41.0 16 36.16927635627674 37.0 34.0 40.0 31.0 41.0 17 36.121152699954614 37.0 34.0 40.0 31.0 41.0 18 36.06292571672242 37.0 35.0 40.0 30.0 41.0 19 35.98563970777076 37.0 34.0 40.0 30.0 41.0 20 35.82572528319197 36.0 34.0 40.0 30.0 41.0 21 35.64284618229923 36.0 34.0 40.0 30.0 41.0 22 35.51818033509771 36.0 34.0 40.0 29.0 41.0 23 35.51557737565478 36.0 34.0 40.0 30.0 41.0 24 35.419307449648926 35.0 34.0 40.0 29.0 41.0 25 35.30489272382786 35.0 34.0 40.0 29.0 41.0 26 35.13330899704896 35.0 34.0 40.0 29.0 41.0 27 35.01252618708034 35.0 34.0 40.0 29.0 41.0 28 35.04412593704117 36.0 34.0 40.0 29.0 41.0 29 35.074495681655556 36.0 34.0 40.0 29.0 41.0 30 35.017143350944835 36.0 34.0 40.0 29.0 41.0 31 34.82975853775543 35.0 34.0 40.0 27.0 41.0 32 34.64125517078741 35.0 33.0 40.0 27.0 41.0 33 34.45234476331079 35.0 33.0 40.0 26.0 41.0 34 34.31887262701037 35.0 33.0 40.0 25.0 41.0 35 34.148345267265704 35.0 33.0 40.0 24.0 41.0 36 33.92679893329543 35.0 33.0 40.0 23.0 41.0 37 33.83861732215802 35.0 33.0 40.0 23.0 41.0 38 33.81730745934037 35.0 33.0 39.0 23.0 41.0 39 33.7801294776475 35.0 33.0 39.0 23.0 41.0 40 33.62302234038601 35.0 33.0 39.0 23.0 41.0 41 33.60583780081828 35.0 33.0 39.0 23.0 41.0 42 33.55235881589978 35.0 33.0 39.0 23.0 41.0 43 33.45396646438476 35.0 32.0 39.0 23.0 41.0 44 33.351158854019445 35.0 32.0 39.0 23.0 41.0 45 33.268758994868385 35.0 32.0 39.0 23.0 41.0 46 33.19667728956248 35.0 32.0 39.0 23.0 41.0 47 33.12087164817486 35.0 32.0 39.0 23.0 40.0 48 33.0856545679798 35.0 32.0 38.0 23.0 40.0 49 33.07790141543491 35.0 32.0 38.0 23.0 40.0 50 32.968449514862634 35.0 32.0 38.0 23.0 40.0 51 32.802263920543105 35.0 32.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 5.0 14 16.0 15 50.0 16 174.0 17 456.0 18 1004.0 19 1893.0 20 3301.0 21 5036.0 22 7191.0 23 10112.0 24 13921.0 25 18918.0 26 24235.0 27 28693.0 28 32079.0 29 36638.0 30 43172.0 31 52243.0 32 63886.0 33 81757.0 34 134105.0 35 186899.0 36 86848.0 37 99446.0 38 129822.0 39 176193.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.751088268026486 22.85710132239708 28.5512265325802 14.840583876996236 2 29.661865634635916 26.760490580727275 30.107187333933126 13.47045645070368 3 28.52950155305337 25.77018686712873 31.97916986349606 13.721141716321839 4 25.920081149663304 28.882108469834584 29.978371934879977 15.219438445622133 5 23.153497883227832 33.19140756869212 29.67793727376543 13.977157274314614 6 21.711734557900705 41.396019725312264 27.154286120403228 9.737959596383801 7 86.86624035095937 4.954345238191384 6.418318115079397 1.7610962957698477 8 87.96460362815233 3.914695939124831 6.077906261155252 2.042794171567574 9 82.68607969917768 5.793947049198598 8.257268984320865 3.2627042673028557 10 52.966549992489135 22.678375003836194 13.166952833373447 11.188122170301225 11 48.59821386748247 20.384653280633433 18.151987633721692 12.865145218162406 12 43.59419999580037 19.69292670201889 21.92946892520308 14.78340437697766 13 22.325525801037955 40.910236261171406 22.334086573639606 14.430151364151037 14 16.236393621093743 43.15033201260533 25.507468062664856 15.105806303636065 15 14.787119429238754 22.725216967128247 48.06155033976576 14.42611326386724 16 16.413746985558138 17.34404452893945 46.88541325110685 19.35679523439557 17 17.071634283794456 18.101592142179896 27.921282888307765 36.905490685717886 18 21.28708793205654 22.00918102480524 35.2983267727664 21.40540427037181 19 31.064620911221557 23.231675504722155 24.465395903428025 21.238307680628264 20 32.705381818534235 22.349835164746416 24.24370419784753 20.701078818871817 21 22.98042490506426 28.545573192182882 27.104859772929547 21.36914212982331 22 23.616506461768076 24.8846314748919 23.44294891157045 28.055913151769573 23 20.441913542657684 30.96334535610391 23.191859835923907 25.402881265314498 24 20.384734042639106 22.997304164250536 39.05198327257338 17.56597852053697 25 18.172016611129326 24.090337149068894 36.241626999061545 21.49601924074023 26 17.92650011387443 34.293082088117814 25.81210234807455 21.96831544993321 27 18.66571475182643 34.30883067922462 27.147017539892392 19.878437029056553 28 16.355033007431718 28.923539378746348 37.12734391530973 17.594083698512204 29 17.120010725194355 24.163749812228335 36.793069973816955 21.92316948876035 30 19.26254597377173 31.208296519319077 29.65282029000021 19.87633721690898 31 30.633109514894937 26.15130277191356 23.488337158760338 19.72725055443117 32 31.78017228151051 25.399731547093136 25.457718667168468 17.36237750422789 33 30.282521648255624 26.260250717570422 23.246777999783557 20.2104496343904 34 20.606506510225277 27.432349705945537 26.58854827064317 25.372595513186013 35 21.709634745753128 24.34909861525465 30.890417264978527 23.050849374013694 36 32.74293615117355 23.92735942161482 24.118926899078183 19.210777528133445 37 21.64340990109885 33.09287792176746 27.73052303090116 17.533189146232534 38 22.066360524823818 33.98691332460027 21.961127631428052 21.985598519147864 39 21.203499256181928 32.36731206277469 25.729079006239676 20.700109674803706 40 25.24523383023503 25.649932240677238 24.69524457158179 24.40958935750594 41 18.528903914211366 23.264141831003887 27.190952070980114 31.016002183804638 42 22.11425239418966 25.20784102160707 24.00876752333618 28.669139060867092 43 22.46685931097087 25.44431217422626 25.44608893835113 26.642739576451735 44 20.6064257482196 28.897049440884636 27.647741975083306 22.848782835812457 45 18.528903914211366 36.870036165226146 22.496256681036918 22.104803239525573 46 22.475743131595227 33.04070566610079 24.643233839926474 19.840317362377505 47 22.237899024879543 27.423708171338212 25.928238112236574 24.41015469154567 48 23.333677917890885 23.98292368151988 30.438150033193185 22.245248367396055 49 22.015641985259318 23.902807771889332 32.109358216645695 21.972192026205654 50 20.386753092781007 33.28702978341245 25.29700227587332 21.02921484793322 51 19.017352524539536 34.23743706620708 23.110855544230926 23.634354865022463 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1215.0 1 1573.0 2 1931.0 3 5555.5 4 9180.0 5 6893.5 6 4607.0 7 5042.0 8 5477.0 9 5785.5 10 6094.0 11 6204.5 12 6315.0 13 6262.0 14 6209.0 15 5919.0 16 5629.0 17 5365.5 18 5102.0 19 4835.0 20 4568.0 21 4557.5 22 4547.0 23 4461.0 24 4375.0 25 5064.5 26 6821.0 27 7888.0 28 9466.0 29 11044.0 30 12173.0 31 13302.0 32 16861.5 33 20421.0 34 22604.5 35 24788.0 36 25638.0 37 26488.0 38 32900.5 39 39313.0 40 61986.0 41 84659.0 42 104514.5 43 124370.0 44 126322.0 45 128274.0 46 121972.0 47 115670.0 48 106624.0 49 97578.0 50 90345.0 51 83112.0 52 79045.5 53 74979.0 54 67576.5 55 60174.0 56 56137.5 57 52101.0 58 48642.5 59 45184.0 60 44402.0 61 43620.0 62 38282.0 63 32944.0 64 27758.5 65 22573.0 66 19978.5 67 17384.0 68 15032.0 69 12680.0 70 11331.5 71 9983.0 72 8547.0 73 7111.0 74 5524.5 75 3675.0 76 3412.0 77 2749.5 78 2087.0 79 1549.5 80 1012.0 81 817.5 82 623.0 83 429.5 84 236.0 85 175.5 86 115.0 87 103.5 88 92.0 89 64.5 90 37.0 91 22.5 92 8.0 93 5.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1238206.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.021482313697593 #Duplication Level Percentage of deduplicated Percentage of total 1 80.09729806760252 15.235693385678658 2 6.7126285000903385 2.5536828858578153 3 2.454980355564971 1.4009209624156238 4 1.260679564899396 0.9591997618789535 5 0.766163600312746 0.7286783686373886 6 0.5086582002401275 0.5805259775750901 7 0.3904614021158639 0.5199008258169928 8 0.31181677655769685 0.47449738403251396 9 0.24963800397321023 0.4273636389662869 >10 4.133962176870484 20.39172925678245 >50 2.0915411686180883 28.79830306526707 >100 1.0187706118296316 26.808445367026152 >500 0.00212598207810858 0.28210476955391134 >1k 8.50392831243432E-4 0.4135325936723477 >5k 4.25196415621716E-4 0.4254217568387539 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5260 0.42480814985551674 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3692 0.29817332495562127 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1421 0.11476281006553028 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.031497182213621966 0.0 2 0.0 0.0 0.0 0.10660584749225896 0.0 3 0.0 0.0 0.0 0.14989428253457018 0.0 4 0.0 0.0 0.0 0.23929782281785097 0.0 5 0.0 0.0 0.0 0.3853962910856513 0.0 6 0.0 0.0 0.0 0.6335779345278573 0.0 7 0.0 0.0 0.0 0.7652200037796618 0.0 8 0.0 0.0 0.0 1.1662841239664483 0.0 9 0.0 0.0 0.0 1.3462218726124733 0.0 10 0.0 0.0 0.0 1.640195573272945 0.0 11 0.0 0.0 0.0 1.8416160154287735 0.0 12 0.0 0.0 0.0 2.0345564469886273 0.0 13 0.0 0.0 0.0 2.1162875967326924 0.0 14 0.0 0.0 0.0 2.1459272528157673 0.0 15 0.0 0.0 0.0 2.184854539551577 0.0 16 0.0 0.0 0.0 2.2701392175453843 0.0 17 0.0 0.0 0.0 2.3641461921521945 0.0 18 0.0 0.0 0.0 2.523166581328147 0.0 19 8.076200567595376E-5 0.0 0.0 2.574369692926702 0.0 20 8.076200567595376E-5 0.0 0.0 2.6430173977512625 0.0 21 8.076200567595376E-5 0.0 0.0 2.7220834013080215 0.0 22 8.076200567595376E-5 0.0 0.0 2.8021993109385677 0.0 23 8.076200567595376E-5 0.0 0.0 2.8964485715624058 0.0 24 8.076200567595376E-5 0.0 0.0 2.9706688547786073 0.0 25 8.076200567595376E-5 0.0 0.0 3.030109690956109 0.0 26 8.076200567595376E-5 0.0 0.0 3.0871276669633323 0.0 27 8.076200567595376E-5 0.0 0.0 3.1501220313905764 0.0 28 8.076200567595376E-5 0.0 0.0 3.2095628675680783 0.0 29 8.076200567595376E-5 0.0 0.0 3.2789374304437224 0.0 30 8.076200567595376E-5 0.0 0.0 3.38118212962948 0.0 31 1.6152401135190753E-4 0.0 0.0 3.460571181208943 0.0 32 1.6152401135190753E-4 0.0 0.0 3.5360028945102835 0.0 33 1.6152401135190753E-4 0.0 0.0 3.6079618415675583 0.0 34 1.6152401135190753E-4 0.0 0.0 3.685008794982418 0.0 35 1.6152401135190753E-4 0.0 0.0 3.792179976514409 0.0 36 2.4228601702786128E-4 0.0 0.0 3.8727804581790104 0.0 37 2.4228601702786128E-4 0.0 0.0 3.957095992104706 0.0 38 2.4228601702786128E-4 0.0 0.0 4.033416087468483 0.0 39 2.4228601702786128E-4 0.0 0.0 4.115227999218224 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGC 20 7.033497E-4 45.000004 18 CGGCACT 20 7.033497E-4 45.000004 28 TAACGCG 20 7.033497E-4 45.000004 1 ACTAGTC 20 7.033497E-4 45.000004 33 TTGACGT 20 7.033497E-4 45.000004 25 AACGCAC 20 7.033497E-4 45.000004 40 ACGTCCG 20 7.033497E-4 45.000004 23 CAGTCGA 20 7.033497E-4 45.000004 39 TACACCG 20 7.033497E-4 45.000004 19 AAATGCG 50 2.1827873E-11 45.0 1 CCTTCGT 30 2.1656397E-6 44.999996 28 ACACGAT 30 2.1656397E-6 44.999996 33 CCACGAA 30 2.1656397E-6 44.999996 19 CGGTCTA 145 0.0 43.448273 31 CGCATCG 90 0.0 42.500004 21 GTTGATC 640 0.0 41.83594 16 CTACGAA 205 0.0 41.707314 11 CGAATAT 205 0.0 41.707314 14 ATCCCGT 65 0.0 41.538464 19 CGTTTTT 4385 0.0 41.356895 1 >>END_MODULE