##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545517_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2127087 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.195556646249074 31.0 31.0 33.0 30.0 34.0 2 31.470689727312518 31.0 31.0 34.0 30.0 34.0 3 31.538320247361767 31.0 31.0 34.0 30.0 34.0 4 35.304156341513064 37.0 35.0 37.0 33.0 37.0 5 35.18054973773992 37.0 35.0 37.0 32.0 37.0 6 35.232798658446974 37.0 35.0 37.0 32.0 37.0 7 35.83948611410817 37.0 35.0 37.0 35.0 37.0 8 35.85982895857104 37.0 35.0 37.0 35.0 37.0 9 37.57207815195147 39.0 37.0 39.0 35.0 39.0 10 36.78572667690602 39.0 37.0 39.0 32.0 39.0 11 36.41288673194843 38.0 35.0 39.0 32.0 39.0 12 35.171061644399124 35.0 35.0 39.0 30.0 39.0 13 34.58183468753276 35.0 33.0 39.0 27.0 39.0 14 35.44475096693271 37.0 33.0 40.0 27.0 41.0 15 35.914819657117924 37.0 34.0 40.0 30.0 41.0 16 36.19160852376983 36.0 34.0 40.0 31.0 41.0 17 36.165499577591326 36.0 34.0 40.0 31.0 41.0 18 36.095230707535706 36.0 35.0 40.0 31.0 41.0 19 35.989941173069084 36.0 35.0 40.0 31.0 41.0 20 35.802820006892055 36.0 34.0 40.0 31.0 41.0 21 35.626527734878735 35.0 34.0 40.0 30.0 41.0 22 35.515564243493564 35.0 34.0 40.0 30.0 41.0 23 35.536550221029984 35.0 34.0 40.0 30.0 41.0 24 35.431687091313144 35.0 34.0 40.0 30.0 41.0 25 35.33843373590267 35.0 34.0 40.0 30.0 41.0 26 35.176176620890445 35.0 34.0 40.0 29.0 41.0 27 35.08594006733152 35.0 34.0 40.0 29.0 41.0 28 35.13862197455958 35.0 34.0 40.0 29.0 41.0 29 35.2034810987985 36.0 34.0 40.0 30.0 41.0 30 35.14879645261336 36.0 34.0 40.0 29.0 41.0 31 34.915858166591214 35.0 34.0 40.0 29.0 41.0 32 34.67630567061902 35.0 34.0 40.0 28.0 41.0 33 34.43327846956895 35.0 33.0 40.0 27.0 41.0 34 34.304970600638335 35.0 34.0 40.0 26.0 41.0 35 34.11031283628737 35.0 33.0 40.0 25.0 41.0 36 33.85951820494413 35.0 33.0 39.0 23.0 41.0 37 33.762000802035836 35.0 33.0 39.0 23.0 41.0 38 33.80941024038979 35.0 33.0 39.0 23.0 41.0 39 33.79281853539606 35.0 33.0 39.0 23.0 41.0 40 33.6103600840022 35.0 33.0 39.0 23.0 41.0 41 33.64114913964497 35.0 33.0 39.0 23.0 41.0 42 33.59415811389003 35.0 33.0 39.0 23.0 41.0 43 33.497480827065374 35.0 33.0 39.0 23.0 41.0 44 33.3901537642795 35.0 33.0 39.0 23.0 41.0 45 33.30626579918922 35.0 33.0 39.0 23.0 41.0 46 33.27718330279862 35.0 33.0 39.0 23.0 41.0 47 33.22617786672571 35.0 32.0 39.0 23.0 41.0 48 33.224305352813495 35.0 33.0 39.0 23.0 41.0 49 33.23990132984687 35.0 33.0 39.0 23.0 40.0 50 33.135563331448125 35.0 32.0 39.0 23.0 40.0 51 32.95765664497973 35.0 32.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 1.0 11 2.0 12 1.0 13 4.0 14 17.0 15 70.0 16 242.0 17 632.0 18 1415.0 19 2713.0 20 4750.0 21 7796.0 22 11413.0 23 16955.0 24 23934.0 25 33058.0 26 41566.0 27 47169.0 28 50595.0 29 57390.0 30 68780.0 31 84927.0 32 106785.0 33 140657.0 34 244019.0 35 369433.0 36 138758.0 37 155023.0 38 208436.0 39 310343.0 40 200.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.433404933601683 24.22242249611793 30.1323829255691 15.211789644711288 2 30.96859695912767 26.72025168693147 29.090676591977665 13.22047476196319 3 27.944696197193625 24.93748492656859 33.243163067613125 13.87465580862466 4 24.42951322630433 27.85292750131988 33.011296670046875 14.706262602328913 5 21.51792568898216 32.93673460464946 32.32994231077525 13.21539739559313 6 19.835389901776466 41.58546406423433 28.272703467230066 10.30644256675914 7 86.6346322458837 4.907368621969859 7.09021304723314 1.3677860849133112 8 87.91003847045278 3.5910143778792314 6.6525252610730075 1.846421890594978 9 83.62737396260708 5.299219072844693 8.749148483348353 2.324258481199876 10 55.2082730983735 20.160341349460552 14.94113780959594 9.690247742570003 11 52.874094947691376 19.101757473953814 18.135882547352317 9.888265031002492 12 46.54910683013906 20.498550364888697 21.466352810204754 11.485989994767491 13 20.12320135471657 48.14575050291784 21.389816213441197 10.341231928924392 14 13.710440616674353 49.39229095942009 25.646388699662964 11.25087972424259 15 11.50987242176742 23.280335971213212 53.67866946674019 11.531122140279171 16 12.54546711065415 17.38386817276397 52.583039621792615 17.48762509478926 17 13.55059760132049 17.78751879918405 28.925286083737994 39.73659751575747 18 19.407339709189138 22.488595906044274 38.39697200913738 19.707092375629205 19 29.460807197825005 24.22472611604509 25.94209827806761 20.372368408062293 20 32.263701484706544 22.720086202397926 25.799179817280628 19.217032495614895 21 20.70709848727391 30.654646471912056 28.530191759904504 20.108063280909523 22 21.714438572564262 26.425482361558316 24.49429666017422 27.3657824057032 23 17.200659869577503 33.52961115365756 23.71492092236942 25.554808054395515 24 18.237523900056743 24.241415607354096 42.641462243904456 14.879598248684703 25 14.420002566890776 25.495995227275614 40.438543416418796 19.645458789414818 26 14.384413989648753 37.58487546583661 28.51303214207975 19.51767840243488 27 15.815055989717392 38.99788772156475 28.30208637446423 16.884969914253624 28 13.048737545760938 30.366788006320384 41.02530832072219 15.55916612719649 29 12.747903588334658 24.737822195330985 40.977308403464455 21.5369658128699 30 15.126978821270592 35.01140291863943 32.66965573105378 17.19196252903619 31 28.708510747327214 28.320938447745675 25.480716115513847 17.489834689413268 32 30.59743207494569 26.670606326868622 27.342746206431613 15.389215391754075 33 28.945736587172977 28.936287044206466 24.447801147766874 17.670175220853686 34 18.660261663016133 28.674849688799753 27.942486602569616 24.722402045614494 35 18.17617238975181 26.788231981108435 32.3695739760527 22.66602165308706 36 32.43097249900921 23.983739264073357 26.40352745327295 17.18176078364449 37 18.37997223432798 34.80073922693336 30.120159636159688 16.699128902578973 38 19.356472020185354 35.69680036594648 23.442764682403684 21.50396293146449 39 19.048821228280744 35.33832889768966 26.795377904147788 18.817471969881815 40 24.378833587906843 27.35238380000442 24.042223002632237 24.2265596094565 41 15.715624231636976 24.844964028269647 27.839387857666374 31.600023882426996 42 20.20039612860217 26.698954955768144 24.792074795248148 28.308574120381536 43 21.036469124206015 26.615178410662093 26.407429503353647 25.940922961778245 44 18.906043805448483 31.13892379578268 29.025517056895183 20.929515341873653 45 15.130457757487118 41.70374789559618 22.286018390409044 20.879775956507657 46 21.006239989243504 35.253753137506834 25.579066582608046 18.160940290641612 47 20.15013960406885 29.365935666947333 26.55246353346149 23.931461195522328 48 22.2885100609425 24.735095461539654 31.534488246131914 21.44190623138593 49 20.87568585582066 23.65493277896015 33.535722798362265 21.933658566856927 50 19.098513600995165 35.762665090802585 25.314103278333235 19.824718029869018 51 16.773690967976393 37.199982887394825 22.37656475734185 23.649761387286933 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3500.0 1 3429.0 2 3358.0 3 10168.0 4 16978.0 5 12494.5 6 8011.0 7 9246.0 8 10481.0 9 11966.5 10 13452.0 11 14577.5 12 15703.0 13 15308.0 14 14913.0 15 14606.5 16 14300.0 17 13801.5 18 13303.0 19 12531.5 20 11760.0 21 11473.5 22 11187.0 23 11071.5 24 10956.0 25 11837.0 26 14987.0 27 17256.0 28 19485.0 29 21714.0 30 24382.0 31 27050.0 32 33412.0 33 39774.0 34 45582.0 35 51390.0 36 57518.5 37 63647.0 38 76804.0 39 89961.0 40 127281.5 41 164602.0 42 209955.0 43 255308.0 44 262463.0 45 269618.0 46 250917.5 47 232217.0 48 201288.0 49 170359.0 50 158093.0 51 145827.0 52 132035.5 53 118244.0 54 102600.0 55 86956.0 56 73863.0 57 60770.0 58 53301.0 59 45832.0 60 39797.0 61 33762.0 62 29962.0 63 26162.0 64 20878.0 65 15594.0 66 12896.0 67 10198.0 68 8713.0 69 7228.0 70 5987.0 71 4746.0 72 4197.0 73 3648.0 74 2921.0 75 1776.5 76 1359.0 77 859.0 78 359.0 79 413.0 80 467.0 81 277.0 82 87.0 83 54.5 84 22.0 85 63.0 86 104.0 87 56.0 88 8.0 89 5.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2127087.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.949564395198582 #Duplication Level Percentage of deduplicated Percentage of total 1 80.57019141606638 14.461998391561599 2 7.653448700612377 2.747521405939816 3 2.7879852876860407 1.5012936436256052 4 1.4824605869200935 1.0643808707306444 5 0.8687547546204454 0.7796884705847315 6 0.581798632111351 0.6265819207272687 7 0.4443662211018306 0.5583326070502852 8 0.35765678004169027 0.5135826723790156 9 0.2908202306698366 0.46980868120512637 >10 2.6104295093288568 10.294743289851597 >50 0.8147212121891192 10.669543937446882 >100 1.5121854367489456 52.26738275378544 >500 0.023082795911148965 2.660115012599169 >1k 0.001573826993941975 0.4137611414489017 >5k 2.623044989903292E-4 0.4511446583253728 >10k+ 2.623044989903292E-4 0.5201205427385089 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11047 0.5193487619453271 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 9582 0.45047522738844253 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2748 0.12919076652718015 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04390981657073735 0.0 2 0.0 0.0 0.0 0.15876172436764457 0.0 3 0.0 0.0 0.0 0.221758677477696 0.0 4 0.0 0.0 0.0 0.3319093201171367 0.0 5 0.0 0.0 0.0 0.5287512922602602 0.0 6 0.0 0.0 0.0 0.8236616555881353 0.0 7 0.0 0.0 0.0 0.9863254300364771 0.0 8 0.0 0.0 0.0 1.4459211118304047 0.0 9 0.0 0.0 0.0 1.6463830581447774 0.0 10 0.0 0.0 0.0 1.9769290113662488 0.0 11 4.701265157466526E-5 0.0 0.0 2.2530813267158325 0.0 12 9.402530314933052E-5 0.0 0.0 2.4848066863273575 0.0 13 9.402530314933052E-5 0.0 0.0 2.591807481311296 0.0 14 9.402530314933052E-5 0.0 0.0 2.635200158714712 0.0 15 9.402530314933052E-5 0.0 0.0 2.689217695374002 0.0 16 9.402530314933052E-5 0.0 0.0 2.8099461846177425 0.0 17 9.402530314933052E-5 0.0 0.0 2.948774544717729 0.0 18 9.402530314933052E-5 0.0 0.0 3.158168894831288 0.0 19 9.402530314933052E-5 0.0 0.0 3.237338200083024 0.0 20 9.402530314933052E-5 0.0 0.0 3.331786617096527 0.0 21 3.7610121259732207E-4 0.0 0.0 3.453126270810738 0.0 22 3.7610121259732207E-4 0.0 0.0 3.5790261517276916 0.0 23 3.7610121259732207E-4 0.0 0.0 3.736142433290223 0.0 24 3.7610121259732207E-4 0.0 0.0 3.8440364686540796 0.0 25 3.7610121259732207E-4 0.0 0.0 3.939190075441202 0.0 26 4.231138641719873E-4 0.0 0.0 4.03561302382084 0.0 27 4.231138641719873E-4 0.0 0.0 4.134715693340235 0.0 28 4.231138641719873E-4 0.0 0.0 4.231091629068299 0.0 29 4.231138641719873E-4 0.0 0.0 4.33832748731011 0.0 30 4.231138641719873E-4 0.0 0.0 4.493422224854931 0.0 31 4.701265157466526E-4 0.0 0.0 4.624681548051396 0.0 32 4.701265157466526E-4 0.0 0.0 4.736994772663271 0.0 33 4.701265157466526E-4 0.0 0.0 4.854573414251509 0.0 34 4.701265157466526E-4 0.0 0.0 4.976054105920444 0.0 35 4.701265157466526E-4 0.0 0.0 5.136696336351076 0.0 36 4.701265157466526E-4 0.0 0.0 5.262173103403857 0.0 37 4.701265157466526E-4 0.0 0.0 5.397381489332594 0.0 38 4.701265157466526E-4 0.0 0.0 5.5257730407830055 0.0 39 4.701265157466526E-4 0.0 0.0 5.657972617010964 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAATC 20 7.0346403E-4 45.000004 19 TACGGCA 20 7.0346403E-4 45.000004 16 CGTACTC 20 7.0346403E-4 45.000004 19 CCACGCA 40 6.8193913E-9 45.000004 1 CACGCTT 25 3.8919286E-5 45.0 35 CGTAAGT 25 3.8919286E-5 45.0 21 TCGCGCG 35 1.2125747E-7 45.0 1 CCCGCAA 25 3.8919286E-5 45.0 40 TACCGCA 25 3.8919286E-5 45.0 31 GACCGTT 30 2.1663764E-6 44.999996 9 ACTTACG 30 2.1663764E-6 44.999996 1 ATGTACG 60 0.0 44.999996 1 CCGTAAG 65 0.0 44.999996 1 ATGCGTA 30 2.1663764E-6 44.999996 25 ACGCGGT 30 2.1663764E-6 44.999996 28 TACGTAG 140 0.0 43.392857 1 CGGTCTA 320 0.0 42.89063 31 CGTTTTT 9795 0.0 42.794792 1 ATCGTAG 100 0.0 42.75 1 GCGTAAG 100 0.0 42.75 1 >>END_MODULE