##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545515_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 470828 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.04568759716924 31.0 31.0 33.0 30.0 34.0 2 31.33011418182436 31.0 31.0 34.0 30.0 34.0 3 31.443934940147994 31.0 31.0 34.0 30.0 34.0 4 35.2077998759632 37.0 35.0 37.0 32.0 37.0 5 35.05769835268931 37.0 35.0 37.0 32.0 37.0 6 35.105012870942254 37.0 35.0 37.0 32.0 37.0 7 35.73076155198926 37.0 35.0 37.0 35.0 37.0 8 35.7469394343582 37.0 35.0 37.0 35.0 37.0 9 37.45648729472334 39.0 37.0 39.0 35.0 39.0 10 36.629081108175384 39.0 35.0 39.0 32.0 39.0 11 36.208362714197115 38.0 35.0 39.0 31.0 39.0 12 35.081382160789076 37.0 34.0 39.0 30.0 39.0 13 34.534452071669484 35.0 33.0 39.0 26.0 39.0 14 35.43519289422039 37.0 33.0 40.0 27.0 41.0 15 35.88911662008207 37.0 34.0 40.0 30.0 41.0 16 36.12709099713696 37.0 34.0 40.0 31.0 41.0 17 36.07801362705701 37.0 34.0 40.0 31.0 41.0 18 36.02421053973001 36.0 35.0 40.0 30.0 41.0 19 35.923086562396456 36.0 34.0 40.0 30.0 41.0 20 35.77566329954888 36.0 34.0 40.0 30.0 41.0 21 35.624198221006395 36.0 34.0 40.0 30.0 41.0 22 35.50626343378049 36.0 34.0 40.0 30.0 41.0 23 35.49280629019515 35.0 34.0 40.0 30.0 41.0 24 35.40853984894696 35.0 34.0 40.0 29.0 41.0 25 35.32728937106544 35.0 34.0 40.0 29.0 41.0 26 35.14004264827071 35.0 34.0 40.0 29.0 41.0 27 35.050154196436914 35.0 34.0 40.0 29.0 41.0 28 35.11903497667938 36.0 34.0 40.0 29.0 41.0 29 35.14676060047406 36.0 34.0 40.0 29.0 41.0 30 35.10120468621238 36.0 34.0 40.0 29.0 41.0 31 34.91156643190295 35.0 34.0 40.0 29.0 41.0 32 34.73696551606956 35.0 34.0 40.0 27.0 41.0 33 34.519130128199684 35.0 33.0 40.0 26.0 41.0 34 34.40778373418743 35.0 33.0 40.0 25.0 41.0 35 34.253100920081216 35.0 33.0 40.0 25.0 41.0 36 33.99836245932697 35.0 33.0 40.0 23.0 41.0 37 33.93799434188281 35.0 33.0 40.0 23.0 41.0 38 33.97262694657072 35.0 33.0 40.0 24.0 41.0 39 33.9373019446592 35.0 33.0 40.0 23.0 41.0 40 33.78574341373071 35.0 33.0 39.0 23.0 41.0 41 33.777681021519534 35.0 33.0 39.0 23.0 41.0 42 33.72337031782307 35.0 33.0 39.0 23.0 41.0 43 33.63268327287247 35.0 33.0 39.0 23.0 41.0 44 33.52497515016099 35.0 33.0 39.0 23.0 41.0 45 33.47777957130842 35.0 32.0 39.0 23.0 41.0 46 33.43750371685626 35.0 32.0 39.0 23.0 41.0 47 33.35234947794099 35.0 32.0 39.0 23.0 41.0 48 33.35048892589226 35.0 32.0 39.0 23.0 41.0 49 33.35913751943385 35.0 32.0 39.0 23.0 40.0 50 33.262150934099076 35.0 32.0 39.0 23.0 40.0 51 33.08955499672917 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 6.0 15 20.0 16 55.0 17 168.0 18 377.0 19 703.0 20 1157.0 21 1734.0 22 2715.0 23 3708.0 24 5273.0 25 7032.0 26 9001.0 27 10462.0 28 11846.0 29 13595.0 30 16049.0 31 19405.0 32 24115.0 33 30921.0 34 51087.0 35 73635.0 36 31777.0 37 36917.0 38 49037.0 39 69986.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.906556109662127 24.514684768110648 28.84960112822517 14.729157994002056 2 28.79480404733788 26.7144264996984 30.837588248787245 13.653181204176473 3 27.383885410383407 26.051764126177712 31.851121853415687 14.713228610023194 4 24.585198841190415 28.66120961370182 31.210335833892632 15.543255711215137 5 21.952390257163977 33.7335502561445 29.85782493819399 14.456234548497541 6 20.158104445784872 41.91828013627057 27.728809671472387 10.194805746472174 7 88.21947717637863 4.379731027041722 5.841623692728555 1.5591681038510878 8 89.77269831021096 3.077556984716287 5.6126653470057 1.5370793580670647 9 85.56011961905409 4.9495781899122395 7.047371864035274 2.4429303269983946 10 53.929885223478635 24.305903642094354 12.091039615315996 9.673171519111012 11 49.32926673859669 18.451324050396323 19.818914762928287 12.400494448078705 12 44.78726838675694 20.67570322920472 22.077913802917415 12.459114581120918 13 20.069537070862395 44.756896361303916 22.063471161443246 13.110095406390442 14 13.767447985251513 45.5204448333574 26.24185477499214 14.47025240639894 15 12.149022572999058 21.974691394734382 51.26224438648509 14.614041645781475 16 14.750821956213308 17.15892003024459 48.13392576482282 19.956332248719278 17 14.767813299124096 17.77676773683808 28.46708352094608 38.98833544309174 18 20.52023244157102 21.551182172683017 36.89733830613303 21.031247079612935 19 29.068789451774318 24.02129864833867 24.584349274044875 22.32556262584213 20 31.807156753634025 21.90927472452785 26.03456039148054 20.24900813035758 21 20.62600355119067 29.970392584977958 27.49454153108991 21.90906233274147 22 22.698310210947522 24.82180329122312 24.158503742343278 28.32138275548608 23 18.396526969509036 31.94521141478417 23.523452301052615 26.134809314654184 24 18.05075314127452 23.047907091336963 42.424197371439256 16.477142395949265 25 16.12266050447297 25.336003806060813 38.236468519289424 20.304867170176795 26 16.264538217778043 35.71028061202817 26.465290934268992 21.559890235924797 27 15.860781431860469 36.15375466199971 27.609870271096877 20.375593635042947 28 14.11237224634049 28.784821633377796 38.46394012250759 18.638865997774133 29 13.782315410298454 23.687418760141707 38.384293202613264 24.14597262694657 30 16.672967622996083 32.94876260545252 31.10307798176829 19.275191789783104 31 28.934557842779103 27.894900048425324 24.02342256620252 19.14711954259305 32 31.008776028613422 25.316463761713408 25.14718750796469 18.52757270170848 33 28.32350667334993 28.025733388838386 24.115388209707152 19.53537172810453 34 18.430084871757842 27.014960877432948 27.015810444578488 27.539143806230726 35 19.338059758553015 25.46152735181425 31.98514107062452 23.215271819008215 36 31.442692448197647 24.767855777481373 24.69564257011053 19.093809204210455 37 20.04383766470983 33.75776291979237 28.128955797021415 18.069443618476384 38 19.078092212017978 33.90664956204814 24.90463608791321 22.110622138020677 39 19.697214269329777 34.00010194805746 26.46847681106476 19.834206971547996 40 25.420748128828365 25.66627303388923 24.467109007960445 24.44586982932196 41 16.397283084268565 24.645730500310094 27.163210344329563 31.793776071091777 42 20.467346886761195 25.495510037635828 24.36707247657319 29.670070599029795 43 20.34500921780353 25.89586855497124 27.08377581622163 26.67534641100359 44 18.91221422685142 29.211729124011317 29.83318749097335 22.042869158163917 45 15.856321204346385 39.89737228881884 21.43882691768544 22.80747958914933 46 21.513376434706515 34.6874017687988 24.64211983994155 19.157101956553134 47 19.508822754806427 28.6937055570187 26.75117027874298 25.04630140943189 48 21.80817623420867 24.184415540282224 31.532746565624812 22.47466165988429 49 20.66168537130332 23.664480447212146 33.092976628407826 22.580857553076708 50 19.54896480243316 34.523435309709704 25.788823094633283 20.138776793223855 51 16.66532151868623 35.42164017433117 24.272345739845548 23.640692567137044 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 433.0 1 505.5 2 578.0 3 1858.5 4 3139.0 5 2294.5 6 1450.0 7 1633.0 8 1816.0 9 2022.0 10 2228.0 11 2320.5 12 2413.0 13 2365.0 14 2317.0 15 2208.0 16 2099.0 17 2023.0 18 1947.0 19 1812.5 20 1678.0 21 1705.0 22 1732.0 23 1709.0 24 1686.0 25 2082.0 26 2798.0 27 3118.0 28 3462.0 29 3806.0 30 4921.5 31 6037.0 32 7872.0 33 9707.0 34 11217.0 35 12727.0 36 13601.5 37 14476.0 38 16957.5 39 19439.0 40 27957.0 41 36475.0 42 44916.5 43 53358.0 44 51318.5 45 49279.0 46 46366.5 47 43454.0 48 41226.5 49 38999.0 50 36420.5 51 33842.0 52 31494.5 53 29147.0 54 25320.0 55 21493.0 56 19714.5 57 17936.0 58 16086.5 59 14237.0 60 12541.0 61 10845.0 62 9739.5 63 8634.0 64 7157.5 65 5681.0 66 4844.5 67 4008.0 68 3243.5 69 2479.0 70 2230.5 71 1982.0 72 1773.5 73 1565.0 74 1270.0 75 765.0 76 555.0 77 382.0 78 209.0 79 197.5 80 186.0 81 145.5 82 105.0 83 86.5 84 68.0 85 39.5 86 11.0 87 5.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 470828.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.691487812560812 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8773708164187 16.24201576500943 2 6.606497644013046 2.8660952625764136 3 2.6633583512652788 1.7331661565085852 4 1.4879596510391018 1.2910423454438764 5 1.120066872865744 1.2147958461010193 6 0.8722603830617195 1.1352375281137745 7 0.6804219312316705 1.033155482009761 8 0.6184744476923374 1.073250475559889 9 0.5665185860788464 1.105976790496663 >10 8.860470562334282 47.19484486440012 >50 1.539691603102457 21.23830870786798 >100 0.10391169806791405 2.992184113525576 >500 9.991509429607118E-4 0.12722092384756722 >1k 0.0019983018859214235 0.7527057385393543 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1933 0.41055332308188974 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1540 0.3270833510326489 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 587 0.12467397860789926 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03653138725819195 0.0 2 0.0 0.0 0.0 0.1127800385703484 0.0 3 0.0 0.0 0.0 0.15738231371116415 0.0 4 0.0 0.0 0.0 0.24679925577918052 0.0 5 0.0 0.0 0.0 0.4145887670232017 0.0 6 0.0 0.0 0.0 0.6558658363563764 0.0 7 0.0 0.0 0.0 0.7858496096238966 0.0 8 0.0 0.0 0.0 1.1369332325180321 0.0 9 0.0 0.0 0.0 1.2796605129686425 0.0 10 2.1239178638483692E-4 0.0 0.0 1.5205127987290477 0.0 11 2.1239178638483692E-4 0.0 0.0 1.7129397571937097 0.0 12 2.1239178638483692E-4 0.0 0.0 1.8837027534471187 0.0 13 2.1239178638483692E-4 0.0 0.0 1.9582522704681964 0.0 14 2.1239178638483692E-4 0.0 0.0 1.9907482137850765 0.0 15 2.1239178638483692E-4 0.0 0.0 2.0272796010432685 0.0 16 2.1239178638483692E-4 0.0 0.0 2.1122363155972033 0.0 17 2.1239178638483692E-4 0.0 0.0 2.2148215484210794 0.0 18 2.1239178638483692E-4 0.0 0.0 2.374540171782477 0.0 19 2.1239178638483692E-4 0.0 0.0 2.436770965193234 0.0 20 4.2478357276967384E-4 0.0 0.0 2.5106833068551575 0.0 21 4.2478357276967384E-4 0.0 0.0 2.602436558573407 0.0 22 4.2478357276967384E-4 0.0 0.0 2.694614593864426 0.0 23 4.2478357276967384E-4 0.0 0.0 2.8139787778127046 0.0 24 4.2478357276967384E-4 0.0 0.0 2.906793988462878 0.0 25 4.2478357276967384E-4 0.0 0.0 2.9753965354651806 0.0 26 4.2478357276967384E-4 0.0 0.0 3.0510080114181823 0.0 27 4.2478357276967384E-4 0.0 0.0 3.1264070955847996 0.0 28 4.2478357276967384E-4 0.0 0.0 3.20414248940165 0.0 29 4.2478357276967384E-4 0.0 0.0 3.289523987528354 0.0 30 4.2478357276967384E-4 0.0 0.0 3.418658193650335 0.0 31 4.2478357276967384E-4 0.0 0.0 3.5116857960868937 0.0 32 4.2478357276967384E-4 0.0 0.0 3.6059877492417614 0.0 33 4.2478357276967384E-4 0.0 0.0 3.6864842362816144 0.0 34 4.2478357276967384E-4 0.0 0.0 3.780998581222867 0.0 35 4.2478357276967384E-4 0.0 0.0 3.912681488781466 0.0 36 4.2478357276967384E-4 0.0 0.0 4.018452598401114 0.0 37 4.2478357276967384E-4 0.0 0.0 4.11487846941983 0.0 38 4.2478357276967384E-4 0.0 0.0 4.208755639001929 0.0 39 4.2478357276967384E-4 0.0 0.0 4.3047567264478745 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAA 30 2.1627602E-6 45.000004 6 TCTTGCG 30 2.1627602E-6 45.000004 1 AGTCCAT 30 2.1627602E-6 45.000004 38 CTAAGCG 30 2.1627602E-6 45.000004 1 GTAATCC 45 3.8380676E-10 45.000004 9 TCGCTAT 30 2.1627602E-6 45.000004 23 TCGAGAG 45 3.8380676E-10 45.000004 1 TAGTGCG 30 2.1627602E-6 45.000004 1 CAATACG 30 2.1627602E-6 45.000004 1 TGTCACG 20 7.02904E-4 45.0 1 GGTACGA 25 3.887285E-5 45.0 21 CACGGGT 25 3.887285E-5 45.0 4 CGACGGT 85 0.0 45.0 28 TCCGATC 20 7.02904E-4 45.0 14 GACGTCG 25 3.887285E-5 45.0 19 GACCGAA 20 7.02904E-4 45.0 9 CCTACTG 20 7.02904E-4 45.0 24 AAGCGAC 25 3.887285E-5 45.0 15 GGATACC 20 7.02904E-4 45.0 8 ACGGGTA 50 2.1827873E-11 45.0 5 >>END_MODULE