##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545511_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2181251 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.063921116826997 31.0 31.0 33.0 30.0 34.0 2 31.360574275954487 31.0 31.0 34.0 30.0 34.0 3 31.446532746575244 31.0 31.0 34.0 30.0 34.0 4 35.224162647948354 37.0 35.0 37.0 33.0 37.0 5 35.09659227663391 37.0 35.0 37.0 32.0 37.0 6 35.13843523739359 37.0 35.0 37.0 32.0 37.0 7 35.777327322715266 37.0 35.0 37.0 35.0 37.0 8 35.78081477097317 37.0 35.0 37.0 35.0 37.0 9 37.42435648167038 39.0 37.0 39.0 35.0 39.0 10 36.611997885617015 39.0 35.0 39.0 32.0 39.0 11 36.28435241978113 38.0 35.0 39.0 31.0 39.0 12 35.96923371037996 37.0 35.0 39.0 31.0 39.0 13 35.84996132953062 38.0 35.0 39.0 30.0 39.0 14 36.880786301072185 39.0 35.0 41.0 31.0 41.0 15 37.044188862262985 39.0 35.0 41.0 31.0 41.0 16 37.07374025272653 39.0 35.0 41.0 32.0 41.0 17 36.98648023542454 38.0 35.0 41.0 31.0 41.0 18 36.84873313525129 38.0 35.0 40.0 31.0 41.0 19 36.80113613701495 38.0 35.0 40.0 31.0 41.0 20 36.68986283559297 38.0 35.0 40.0 31.0 41.0 21 36.5961964028899 38.0 35.0 40.0 31.0 41.0 22 36.495364357426084 38.0 35.0 40.0 30.0 41.0 23 36.41113792039522 38.0 35.0 40.0 30.0 41.0 24 36.31981601383793 38.0 35.0 40.0 30.0 41.0 25 36.22565307706449 38.0 35.0 40.0 30.0 41.0 26 36.086169817228736 38.0 34.0 40.0 30.0 41.0 27 35.9968288839753 38.0 34.0 40.0 30.0 41.0 28 35.96824299450178 38.0 34.0 40.0 30.0 41.0 29 35.94909389153289 38.0 34.0 40.0 30.0 41.0 30 35.852906428466966 38.0 34.0 40.0 29.0 41.0 31 35.72897112711925 38.0 34.0 40.0 29.0 41.0 32 35.5629856444765 38.0 34.0 40.0 28.0 41.0 33 35.35181324845238 38.0 34.0 40.0 27.0 41.0 34 35.16193230398519 38.0 34.0 40.0 26.0 41.0 35 35.00007518621195 38.0 34.0 40.0 25.0 41.0 36 34.873093926375276 38.0 34.0 40.0 24.0 41.0 37 34.839153770015464 38.0 33.0 40.0 24.0 41.0 38 34.761824751025905 38.0 33.0 40.0 24.0 41.0 39 34.71211657897234 38.0 33.0 40.0 24.0 41.0 40 34.61193599452791 37.0 33.0 40.0 24.0 41.0 41 34.551277225775486 37.0 33.0 40.0 23.0 41.0 42 34.4903539299237 37.0 33.0 40.0 23.0 41.0 43 34.44752117019087 37.0 33.0 40.0 23.0 41.0 44 34.336897037525716 37.0 33.0 40.0 23.0 41.0 45 34.24631278106004 37.0 33.0 40.0 23.0 41.0 46 34.18017733860065 37.0 33.0 40.0 23.0 41.0 47 34.11693014696612 37.0 33.0 40.0 23.0 41.0 48 34.02621110546196 37.0 33.0 40.0 23.0 41.0 49 33.981466140302054 36.0 33.0 40.0 23.0 41.0 50 33.95067646960391 36.0 33.0 40.0 23.0 41.0 51 33.80868684988568 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 2.0 13 10.0 14 13.0 15 62.0 16 209.0 17 637.0 18 1337.0 19 2571.0 20 4566.0 21 6984.0 22 10234.0 23 14986.0 24 20924.0 25 29426.0 26 38449.0 27 44689.0 28 48989.0 29 55746.0 30 64864.0 31 78138.0 32 95319.0 33 118170.0 34 168861.0 35 217424.0 36 180237.0 37 218262.0 38 303793.0 39 456152.0 40 193.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.611125908939414 24.044825652801993 28.084800878028247 16.259247560230346 2 32.10309129944238 25.654360731525166 28.788204567012233 13.454343402020216 3 27.674531725143048 25.71891084519847 32.983778574771996 13.622778854886485 4 24.857111813358483 28.74836504372949 31.881796271955864 14.512726870956163 5 22.746213067638706 32.393062513209166 30.47049605937143 14.390228359780693 6 20.487784303594587 41.11026195518077 27.922554534072418 10.479399207152227 7 87.34506024295231 3.4746115875706187 7.654506519423945 1.5258216500531119 8 88.04511722859955 2.8700044148976893 7.494231521269216 1.5906468352335426 9 82.1493720805171 5.842289585196752 9.239147626751805 2.7691907075343463 10 36.529450301684676 38.062744727681505 14.94550604217488 10.462298928458944 11 28.556961120017828 24.173788344395028 31.56275916893562 15.706491366651523 12 28.458439675213903 23.28063116074216 31.6408794769607 16.620049687083238 13 21.305709430047255 30.217934570574407 31.79643241424302 16.67992358513532 14 17.643040622101722 32.96103933018254 31.654449671312474 17.741470376403264 15 17.14112681209086 26.304583929130576 39.703454577212796 16.850834681565765 16 19.357882242804703 24.524091908725772 38.112349289467375 18.00567655900215 17 19.829721568035957 23.54534164110412 32.06416868118341 24.560768109676513 18 21.383279595058067 24.74281960214574 34.47374923839576 19.400151564400428 19 25.196962660418265 25.562807764901883 30.005441831316066 19.234787743363785 20 26.173512355982876 25.68063006045613 30.016903144113172 18.128954439447824 21 23.327347471703163 26.664148234201384 31.579813602377715 18.428690691717733 22 22.75194372403726 25.609799147370016 29.833797210866607 21.804459917726113 23 19.90316566043981 28.731906598552847 30.42396312941518 20.940964611592154 24 19.19985366195821 25.607644420564164 36.15241895591108 19.04008296156655 25 19.606776111506655 27.775987266023026 33.24573834006265 19.371498282407664 26 19.394466753253063 31.01183678540434 29.79689178365993 19.79680467768267 27 18.52973362533702 30.446198076241572 31.577842256576616 19.446226041844795 28 18.48815198250912 28.237052957225007 35.17380622404299 18.100988836222882 29 19.06419756369166 26.119414959580535 34.37646561537393 20.439921861353874 30 19.671876368194216 28.584835032740386 32.28257545784506 19.46071314122034 31 23.047691439453782 27.328766840679958 30.061373037765943 19.562168682100317 32 24.002785557462207 27.732067515384518 29.974037834251995 18.291109092901277 33 23.623737020636323 28.08865187912808 29.351092561103698 18.936518539131903 34 20.316231373647508 27.727162073507362 30.986117599487635 20.9704889533575 35 20.23123427794417 27.54309338998584 31.667790639408306 20.557881692661688 36 24.110200980996684 28.098050155621706 28.86151112366252 18.93023773971909 37 20.90763511397817 30.707516008015585 29.545568116644986 18.839280761361255 38 20.433457680936307 30.390266869791695 29.017889275466235 20.158386173805766 39 20.80824260940167 30.204410221473825 28.944857790323077 20.04248937880143 40 22.470591417493907 28.1313338079845 29.0334766608703 20.364598113651294 41 19.043475510154494 27.621947222029924 30.00154498496505 23.33303228285053 42 20.917125080974174 28.414061472063505 28.03221637491513 22.636597072047188 43 20.779910244167223 28.536789209494916 28.92294376025501 21.76035678608285 44 20.737732613073874 29.353980811928565 29.869052209030507 20.039234365967054 45 19.25248401032252 32.208351996171004 27.88308177279919 20.65608222070729 46 20.43831727756228 30.962553140376787 28.799940951316472 19.799188630744467 47 20.57846621044529 28.78242806536249 29.575550910922217 21.06355481327 48 21.28141144691739 27.018256954380764 30.706920019750132 20.99341157895171 49 20.546924677627654 27.810967192679797 31.064833895778154 20.57727423391439 50 19.446271887095985 30.679321178534703 29.58637039020269 20.288036544166626 51 19.578581282025773 30.82098300470693 28.764319191143063 20.836116522124232 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1532.0 1 2124.0 2 2716.0 3 14020.5 4 25325.0 5 18790.0 6 12255.0 7 12334.0 8 12413.0 9 12886.0 10 13359.0 11 13170.5 12 12982.0 13 12868.0 14 12754.0 15 12645.0 16 12536.0 17 11965.0 18 11394.0 19 11579.5 20 11765.0 21 11747.0 22 11729.0 23 13953.0 24 16177.0 25 19237.5 26 26452.0 27 30606.0 28 36222.5 29 41839.0 30 49193.5 31 56548.0 32 64580.0 33 72612.0 34 81934.0 35 91256.0 36 99972.0 37 108688.0 38 115205.0 39 121722.0 40 135776.0 41 149830.0 42 162313.0 43 174796.0 44 172917.5 45 171039.0 46 168380.5 47 165722.0 48 158694.0 49 151666.0 50 145596.5 51 139527.0 52 130123.5 53 120720.0 54 108506.0 55 96292.0 56 87219.5 57 78147.0 58 70795.0 59 63443.0 60 59207.5 61 54972.0 62 46155.5 63 37339.0 64 31135.5 65 24932.0 66 21017.5 67 17103.0 68 14431.5 69 11760.0 70 9709.0 71 7658.0 72 6803.0 73 5948.0 74 4643.5 75 2768.5 76 2198.0 77 1645.5 78 1093.0 79 900.0 80 707.0 81 462.0 82 217.0 83 219.0 84 221.0 85 131.0 86 41.0 87 34.5 88 28.0 89 15.5 90 3.0 91 3.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2181251.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.898776873450117 #Duplication Level Percentage of deduplicated Percentage of total 1 77.65976238373138 15.453342837190254 2 5.9721679187072025 2.3767767373026323 3 2.4377499717516486 1.4552472828343617 4 1.3817941394631186 1.0998405306487045 5 0.9858245937238143 0.9808351813434898 6 0.7318893613375622 0.8738221858384836 7 0.5802636844037105 0.808257630860086 8 0.46021776977654494 0.7326216571184243 9 0.39546886900226064 0.7082412106204494 >10 6.642357968610094 33.68718293320049 >50 2.465225021300068 33.877041029864834 >100 0.2863531066371071 7.0824141318553675 >500 0.0 0.0 >1k 6.939086665984045E-4 0.20629052988429242 >5k 0.0 0.0 >10k+ 2.3130288886613485E-4 0.658086121438111 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14298 0.6554954014920795 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2326 0.10663605426427313 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017237814446847244 0.0 2 0.0 0.0 0.0 0.06899710303857741 0.0 3 0.0 0.0 0.0 0.10438963695604037 0.0 4 0.0 0.0 0.0 0.1397363256223149 0.0 5 0.0 0.0 0.0 0.2285844224254797 0.0 6 0.0 0.0 0.0 0.3921144334145864 0.0 7 0.0 0.0 0.0 0.48288803076766496 0.0 8 0.0 0.0 0.0 0.6921716024428184 0.0 9 0.0 0.0 0.0 0.8196672459978241 0.0 10 0.0 0.0 0.0 1.0171227428663643 0.0 11 0.0 0.0 0.0 1.1576384377588824 0.0 12 0.0 0.0 0.0 1.2872888081197442 0.0 13 0.0 0.0 0.0 1.3453747413754766 0.0 14 0.0 0.0 0.0 1.3756784524110246 0.0 15 0.0 0.0 0.0 1.4133174036367204 0.0 16 0.0 0.0 0.0 1.4845150787323422 0.0 17 0.0 0.0 0.0 1.5653861018287212 0.0 18 0.0 0.0 0.0 1.6931568168908575 0.0 19 0.0 0.0 0.0 1.7452370222409066 0.0 20 4.584525118842352E-5 0.0 0.0 1.811941862720063 0.0 21 4.584525118842352E-5 0.0 0.0 1.8800679059860603 0.0 22 4.584525118842352E-5 0.0 0.0 1.958188214011134 0.0 23 4.584525118842352E-5 0.0 0.0 2.0445148219989355 0.0 24 4.584525118842352E-5 0.0 0.0 2.115024818326731 0.0 25 4.584525118842352E-5 0.0 0.0 2.1754947046442616 0.0 26 4.584525118842352E-5 0.0 0.0 2.2322969708667184 0.0 27 4.584525118842352E-5 0.0 0.0 2.2970763107959606 0.0 28 4.584525118842352E-5 0.0 0.0 2.3630934725072907 0.0 29 4.584525118842352E-5 0.0 0.0 2.433603468835086 0.0 30 4.584525118842352E-5 0.0 0.0 2.5377180342839956 0.0 31 4.584525118842352E-5 0.0 0.0 2.6185432121291865 0.0 32 4.584525118842352E-5 0.0 0.0 2.698955782713681 0.0 33 4.584525118842352E-5 0.0 0.0 2.778451448274408 0.0 34 4.584525118842352E-5 0.0 0.0 2.859735078631483 0.0 35 4.584525118842352E-5 0.0 0.0 2.956468558639056 0.0 36 4.584525118842352E-5 0.0 0.0 3.043620381148249 0.0 37 4.584525118842352E-5 0.0 0.0 3.129442691372978 0.0 38 9.169050237684704E-5 0.0 0.0 3.2143480965739384 0.0 39 9.169050237684704E-5 0.0 0.0 3.3076431827423804 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 10790 0.0 42.810474 1 GCGTAAG 150 0.0 40.5 1 ACGGGAT 1355 0.0 40.1845 5 GCGTTAG 160 0.0 39.375004 1 CGTTAGG 305 0.0 39.09836 2 CGACGGT 75 0.0 39.0 28 TACGGGA 1055 0.0 38.815166 4 AGGGCGA 2120 0.0 38.41981 6 GGCACCG 1020 0.0 38.161766 8 TAGGGCG 935 0.0 37.780746 5 GAACGGG 645 0.0 37.674416 3 GGGCGAT 4290 0.0 37.604893 7 AAGGGAT 4335 0.0 36.955017 5 TAGGGAC 2340 0.0 36.923077 5 GTCGACG 55 2.752131E-9 36.81818 1 GCCCTAC 1095 0.0 36.780823 26 TAGGGAT 4380 0.0 36.72945 5 TGCGGGA 1735 0.0 36.700287 4 CTACGGG 510 0.0 36.61765 3 GGGACCG 1630 0.0 36.579754 7 >>END_MODULE