SRR1545510_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545510_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1525818
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6085	0.3988024784083029	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3954	0.259139687695387	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	2432	0.1593899141313053	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACGTAT	30	2.1659707E-6	45.000004	19
TGCGCTA	20	7.034013E-4	45.000004	41
CGTAGAT	30	2.1659707E-6	45.000004	35
CTATTCG	20	7.034013E-4	45.000004	27
TTAGTCG	20	7.034013E-4	45.000004	1
TAGTCCG	20	7.034013E-4	45.000004	1
GTACGCC	20	7.034013E-4	45.000004	12
TACCGAA	20	7.034013E-4	45.000004	8
CAACCGG	25	3.891409E-5	45.0	2
GTAGCGT	35	1.2122837E-7	45.0	14
GTATGCG	35	1.2122837E-7	45.0	1
GTCGTTA	25	3.891409E-5	45.0	14
TTACGTA	35	1.2122837E-7	45.0	27
TAAACGG	205	0.0	42.80488	2
TAGAACG	95	0.0	42.63158	1
CGTTTTT	4830	0.0	42.065216	1
TAATGCG	75	0.0	42.0	1
CGTAAGG	215	0.0	41.860466	2
TGACCGG	60	3.6379788E-12	41.250004	2
GCTACGA	305	0.0	40.573772	10