##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545508_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1901208 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07717040955014 31.0 31.0 33.0 30.0 34.0 2 31.351230901616237 31.0 31.0 34.0 30.0 34.0 3 31.473925525245 31.0 31.0 34.0 30.0 34.0 4 35.25335681314196 37.0 35.0 37.0 33.0 37.0 5 35.125507046046515 37.0 35.0 37.0 32.0 37.0 6 35.169971933633775 37.0 35.0 37.0 32.0 37.0 7 35.7376084047616 37.0 35.0 37.0 35.0 37.0 8 35.72244909552243 37.0 35.0 37.0 35.0 37.0 9 37.38100775927726 39.0 37.0 39.0 35.0 39.0 10 36.61043767962264 39.0 35.0 39.0 32.0 39.0 11 36.2750861557494 38.0 35.0 39.0 32.0 39.0 12 35.44647929106126 37.0 35.0 39.0 30.0 39.0 13 35.0779378163778 37.0 34.0 39.0 30.0 39.0 14 35.9925568375475 38.0 34.0 40.0 30.0 41.0 15 36.28645103534174 38.0 35.0 40.0 30.0 41.0 16 36.44296520948786 38.0 35.0 40.0 31.0 41.0 17 36.38580207951997 38.0 35.0 40.0 31.0 41.0 18 36.32852165570522 38.0 35.0 40.0 31.0 41.0 19 36.244746498016 37.0 35.0 40.0 30.0 41.0 20 36.136312281454735 37.0 34.0 40.0 30.0 41.0 21 35.99452874172631 37.0 34.0 40.0 30.0 41.0 22 35.86014628594031 37.0 34.0 40.0 30.0 41.0 23 35.80413505518597 37.0 34.0 40.0 30.0 41.0 24 35.722424374397754 37.0 34.0 40.0 30.0 41.0 25 35.59204042903249 36.0 34.0 40.0 29.0 41.0 26 35.41258452520713 36.0 34.0 40.0 29.0 41.0 27 35.32449211238328 36.0 34.0 40.0 29.0 41.0 28 35.35617617851387 36.0 34.0 40.0 29.0 41.0 29 35.352544803093615 36.0 34.0 40.0 29.0 41.0 30 35.28635320280579 36.0 34.0 40.0 29.0 41.0 31 35.14766664141956 36.0 34.0 40.0 28.0 41.0 32 34.992132896558395 36.0 34.0 40.0 27.0 41.0 33 34.811926417309415 36.0 33.0 40.0 27.0 41.0 34 34.66443124581845 36.0 33.0 40.0 26.0 41.0 35 34.526124968967096 36.0 33.0 40.0 25.0 41.0 36 34.34186264732738 36.0 33.0 40.0 24.0 41.0 37 34.28572360309866 35.0 33.0 40.0 24.0 41.0 38 34.244904292428814 35.0 33.0 40.0 24.0 41.0 39 34.19768904822618 35.0 33.0 40.0 24.0 41.0 40 34.010809443259234 35.0 33.0 40.0 23.0 41.0 41 33.98044453841978 35.0 33.0 40.0 23.0 41.0 42 33.90463431670811 35.0 33.0 40.0 23.0 41.0 43 33.849782874887964 35.0 33.0 40.0 23.0 41.0 44 33.73804181341547 35.0 33.0 39.0 23.0 41.0 45 33.66314837724226 35.0 33.0 39.0 23.0 41.0 46 33.592965104291586 35.0 32.0 39.0 23.0 41.0 47 33.51536707188272 35.0 32.0 39.0 23.0 41.0 48 33.459064973427424 35.0 32.0 39.0 23.0 41.0 49 33.42494982137673 35.0 32.0 39.0 23.0 41.0 50 33.37075427833251 35.0 32.0 39.0 23.0 41.0 51 33.20112265464905 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 2.0 13 3.0 14 18.0 15 71.0 16 182.0 17 508.0 18 1196.0 19 2469.0 20 4108.0 21 6582.0 22 9760.0 23 13738.0 24 19148.0 25 26208.0 26 33848.0 27 40742.0 28 46075.0 29 53766.0 30 64011.0 31 76939.0 32 94647.0 33 119844.0 34 192102.0 35 259062.0 36 144021.0 37 169748.0 38 220885.0 39 301340.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.3984498276885 24.13723274886283 27.80011445354743 14.664202969901242 2 30.023069543153618 26.543071562922098 29.908405603174405 13.525453290749882 3 29.162195824970226 25.553753192706953 31.28610862146593 13.997942360856888 4 26.01346091537591 28.105341446070074 30.138417258921695 15.742780379632318 5 22.538512356354488 33.78930658823233 29.150256047733862 14.521925007679329 6 21.583119784894656 41.70343276485266 26.502308006278113 10.211139443974568 7 87.42441647626141 4.745666965424088 6.0150704183866255 1.8148461399278775 8 88.06942743771329 3.736098312230961 6.152509351948867 2.0419648981068876 9 83.22924161901275 5.750712178783174 7.991445438899899 3.028600763304173 10 48.714974900168734 25.60677211541294 13.664470168440277 12.013782815978052 11 44.69142776592566 21.69972985596526 19.306093809830383 14.302748568278695 12 40.40173405540057 20.25838309117151 24.08337225595516 15.256510597472763 13 23.289035181842284 35.43873158539203 24.117824036086528 17.15440919667916 14 17.424868820244814 38.32531737716231 26.865813735267263 17.384000067325616 15 16.906303781595703 22.64817947326121 44.15419038842673 16.29132635671636 16 18.753024392912295 17.994296257958098 43.002764558112524 20.24991479101708 17 18.42575878073309 18.350911630920972 29.11559387505207 34.10773571329386 18 22.178846291410515 21.844479930654614 33.687897378929605 22.288776399005265 19 29.493038110506582 23.35283672275732 25.234745488131754 21.91937967860434 20 31.840492991824142 22.624299918788477 24.353884477658415 21.181322611728966 21 24.726016301214806 26.949286979646626 26.397374721755853 21.927321997382716 22 24.95018956368793 24.11188044653715 24.118192223049768 26.819737766725154 23 21.620569658869517 28.82598852939815 24.504946328860388 25.048495482871942 24 21.500698503267397 23.08921485708034 36.50137175942874 18.90871488022352 25 20.116105128949595 24.164373387867084 33.76726796857577 21.952253514607555 26 19.11537296287413 30.995451313059906 26.930193855695954 22.958981868370003 27 19.98340002777182 31.189433244547676 27.81321138981111 21.013955337869398 28 18.109117992350125 27.89153001670517 34.661699298551234 19.337652692393466 29 18.693956684381718 24.283928954643574 33.7144068402826 23.30770752069211 30 20.203891420612578 29.385264526553645 29.614119023273624 20.796725029560154 31 28.785645757855004 25.81201004834821 24.611667950061225 20.79067624373556 32 30.1640325519354 25.46549351780552 25.84819756702055 18.52227636323853 33 28.263609242123955 26.420570500439723 24.362668366638474 20.953151890797848 34 21.378407833335437 26.530132421071233 27.487681516172874 24.603778229420453 35 22.51379123168007 24.5296148553972 29.50844936482489 23.44814454809784 36 29.441597131928752 25.977957172492438 24.38218227568998 20.19826341988883 37 21.92784797875877 31.46525787814905 26.83162494582392 19.775269197268265 38 22.938047809603155 30.635206668602276 23.72943938801015 22.697306133784416 39 22.154545951836937 29.47715347294983 25.742738301122237 22.625562274091 40 24.995949943404405 25.61571379880581 25.494106904662722 23.894229353127063 41 19.58591590188975 24.188252942339815 26.553433396030314 29.67239775974012 42 22.057975771193895 26.100353038699602 24.487431149037874 27.35424004106863 43 22.31223516837716 25.375550702500725 26.30869426175358 26.003519867368535 44 20.775107195004438 27.86407378887528 27.67335294191903 23.687466074201243 45 18.879680708265482 33.92032854900673 23.64007515221901 23.55991559050877 46 22.292879053738464 30.571089538861607 25.824475806960628 21.3115556004393 47 22.828065103870802 27.338355403511873 25.793811092736828 24.039768399880497 48 23.486804179237623 23.8506254970524 29.627110763262092 23.035459560447883 49 22.065234314183403 24.59220663914732 30.57661234331015 22.765946703359127 50 21.812289870440267 30.292109017003927 25.819636778300953 22.075964334254852 51 20.318870949417423 31.62699715128487 24.117981830499346 23.936150068798366 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1280.0 1 2198.5 2 3117.0 3 8752.5 4 14388.0 5 10622.5 6 6857.0 7 7084.5 8 7312.0 9 7635.0 10 7958.0 11 8248.5 12 8539.0 13 8251.5 14 7964.0 15 7763.0 16 7562.0 17 7283.5 18 7005.0 19 6723.5 20 6442.0 21 6655.5 22 6869.0 23 7018.0 24 7167.0 25 8054.0 26 11876.5 27 14812.0 28 16744.5 29 18677.0 30 22365.0 31 26053.0 32 30458.5 33 34864.0 34 37964.5 35 41065.0 36 40861.5 37 40658.0 38 52281.0 39 63904.0 40 88829.0 41 113754.0 42 134876.5 43 155999.0 44 158243.0 45 160487.0 46 161124.0 47 161761.0 48 152287.5 49 142814.0 50 141722.0 51 140630.0 52 131515.0 53 122400.0 54 110466.5 55 98533.0 56 96714.0 57 94895.0 58 91085.5 59 87276.0 60 82547.5 61 77819.0 62 68419.0 63 59019.0 64 52131.0 65 45243.0 66 36743.5 67 28244.0 68 25216.5 69 22189.0 70 19134.0 71 16079.0 72 14614.0 73 13149.0 74 10936.0 75 7007.0 76 5291.0 77 3860.5 78 2430.0 79 1891.0 80 1352.0 81 1149.0 82 946.0 83 713.0 84 480.0 85 314.5 86 149.0 87 96.0 88 43.0 89 50.5 90 58.0 91 32.5 92 7.0 93 5.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1901208.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.020037936066206 #Duplication Level Percentage of deduplicated Percentage of total 1 80.41711048835111 13.687022712205636 2 6.686404168452715 2.2760570520587287 3 2.3300789693388464 1.1897409735653164 4 1.206628242627327 0.82147433856984 5 0.7509452492114906 0.639055831474413 6 0.5205725242156465 0.5316098466374428 7 0.38732609924442996 0.4614613431938119 8 0.3101096396690528 0.4222462265205681 9 0.2533196641580087 0.38803592645287727 >10 3.7397888481977537 16.18704413602084 >50 1.8630142326052745 23.116206223286685 >100 1.5263392199230612 38.650177960224134 >500 0.007123742300768866 0.8061828903478251 >1k 9.291837783611564E-4 0.3972663481109795 >5k 3.097279261203855E-4 0.4264181913309068 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8089 0.4254663350880072 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4747 0.24968335921161702 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.259813760514368E-5 0.0 0.0 0.03739727583725715 0.0 2 5.259813760514368E-5 0.0 0.0 0.1261829321147397 0.0 3 5.259813760514368E-5 0.0 0.0 0.17562518146357473 0.0 4 5.259813760514368E-5 0.0 0.0 0.2534704251191874 0.0 5 5.259813760514368E-5 0.0 0.0 0.40926610870562297 0.0 6 5.259813760514368E-5 0.0 0.0 0.6017752923404488 0.0 7 5.259813760514368E-5 0.0 0.0 0.7118105962104094 0.0 8 5.259813760514368E-5 0.0 0.0 1.0240331410345422 0.0 9 1.0519627521028735E-4 0.0 0.0 1.1598415323310232 0.0 10 1.0519627521028735E-4 0.0 0.0 1.3899583843535268 0.0 11 1.0519627521028735E-4 0.0 0.0 1.5733154920450576 0.0 12 1.0519627521028735E-4 0.0 0.0 1.7424185044455947 0.0 13 1.0519627521028735E-4 0.0 0.0 1.8182124207346066 0.0 14 1.0519627521028735E-4 0.0 0.0 1.846562816903779 0.0 15 1.5779441281543104E-4 0.0 0.0 1.8866951958965037 0.0 16 1.5779441281543104E-4 0.0 0.0 1.9712204030279696 0.0 17 1.5779441281543104E-4 0.0 0.0 2.0679483780838286 0.0 18 1.5779441281543104E-4 0.0 0.0 2.237419577447602 5.259813760514368E-5 19 1.5779441281543104E-4 0.0 0.0 2.2985912114823837 5.259813760514368E-5 20 2.103925504205747E-4 0.0 0.0 2.3688623233228556 5.259813760514368E-5 21 2.103925504205747E-4 0.0 0.0 2.4540713062431885 5.259813760514368E-5 22 2.103925504205747E-4 0.0 0.0 2.538175728273813 5.259813760514368E-5 23 2.103925504205747E-4 0.0 0.0 2.6367972362834577 5.259813760514368E-5 24 2.103925504205747E-4 0.0 0.0 2.7161678259296194 5.259813760514368E-5 25 2.103925504205747E-4 0.0 0.0 2.779285591055792 5.259813760514368E-5 26 2.103925504205747E-4 0.0 0.0 2.8446650760989853 5.259813760514368E-5 27 2.103925504205747E-4 0.0 0.0 2.9132004493984875 5.259813760514368E-5 28 2.103925504205747E-4 0.0 0.0 2.9743194852956645 5.259813760514368E-5 29 2.103925504205747E-4 0.0 0.0 3.046957513328368 5.259813760514368E-5 30 2.103925504205747E-4 0.0 0.0 3.1495764797960035 5.259813760514368E-5 31 2.629906880257184E-4 0.0 0.0 3.238467332348696 5.259813760514368E-5 32 2.629906880257184E-4 0.0 0.0 3.318626894058935 5.259813760514368E-5 33 2.629906880257184E-4 0.0 0.0 3.3957357637880756 5.259813760514368E-5 34 3.155888256308621E-4 0.0 0.0 3.478840821204203 5.259813760514368E-5 35 3.155888256308621E-4 0.0 0.0 3.5895599008630303 5.259813760514368E-5 36 3.155888256308621E-4 0.0 0.0 3.67913452920459 5.259813760514368E-5 37 3.155888256308621E-4 0.0 0.0 3.772075438352879 5.259813760514368E-5 38 3.155888256308621E-4 0.0 0.0 3.8598617300158637 5.259813760514368E-5 39 3.155888256308621E-4 0.0 0.0 3.9464908626515354 5.259813760514368E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 20 7.034454E-4 45.0 1 GTATTCG 25 3.8917715E-5 45.0 34 TCGATAG 95 0.0 45.0 1 ACGGCTA 20 7.034454E-4 45.0 36 ACGTATG 50 2.1827873E-11 45.0 1 TAGTACT 20 7.034454E-4 45.0 43 TCAATCG 30 2.1662545E-6 44.999996 37 TACGTAA 30 2.1662545E-6 44.999996 19 AACGGGA 345 0.0 42.391304 4 CGGTCTA 140 0.0 41.785713 31 GTATACT 65 0.0 41.53846 37 ATTACGG 115 0.0 41.086956 2 GCGATAT 250 0.0 40.500004 9 GGTACCT 1340 0.0 40.46642 8 CATATGC 1325 0.0 40.075474 33 TAACGGG 540 0.0 40.000004 3 AGGGTAC 765 0.0 40.0 6 TAGCATA 1330 0.0 39.755642 30 GTTGATC 1355 0.0 39.686344 16 CGTTTTT 6050 0.0 39.681816 1 >>END_MODULE