SRR1545507_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545507_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1659039
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8722	0.5257260377845246	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3391	0.2043954361530983	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1890	0.11392137255362893	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATACGT	25	3.891556E-5	45.000004	25
TCGAATA	20	7.034193E-4	45.0	1
TACGGGA	355	0.0	43.732395	4
CGATATC	90	0.0	42.5	10
ACGGGAT	340	0.0	40.367645	5
CGGGATA	145	0.0	40.344826	6
CGTTTTT	5710	0.0	40.074432	1
TATTACG	45	1.9292202E-8	40.0	1
CGCATCG	155	0.0	39.193546	21
TCGTTTG	75	0.0	39.0	1
GGTACCT	995	0.0	38.668343	8
TCGATAG	35	6.249964E-6	38.57143	1
CGGTCTA	140	0.0	38.57143	31
TAATCGC	35	6.249964E-6	38.57143	33
GCGATAC	130	0.0	38.076927	9
TCGTAAG	65	9.094947E-12	38.076927	1
TATGGGT	345	0.0	37.826084	4
AGGGATT	1285	0.0	37.82101	6
ATAGGGC	775	0.0	37.741936	4
CGCATTA	30	1.1401401E-4	37.500004	38