##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545507_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1659039 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.182969176734243 31.0 31.0 33.0 30.0 34.0 2 31.47275802437435 31.0 31.0 34.0 30.0 34.0 3 31.579757317338533 31.0 31.0 34.0 30.0 34.0 4 35.3627479522784 37.0 35.0 37.0 33.0 37.0 5 35.252317154690154 37.0 35.0 37.0 33.0 37.0 6 35.29797551474076 37.0 35.0 37.0 32.0 37.0 7 35.80086242698333 37.0 35.0 37.0 35.0 37.0 8 35.78732446916558 37.0 35.0 37.0 35.0 37.0 9 37.42952034280086 39.0 37.0 39.0 35.0 39.0 10 36.752535654677196 39.0 37.0 39.0 32.0 39.0 11 36.466014361326046 38.0 35.0 39.0 32.0 39.0 12 35.79130388134335 37.0 35.0 39.0 31.0 39.0 13 35.50623764721625 37.0 35.0 39.0 30.0 39.0 14 36.49738613739641 38.0 35.0 40.0 31.0 41.0 15 36.71813260568317 38.0 35.0 40.0 31.0 41.0 16 36.816300882619394 38.0 35.0 40.0 32.0 41.0 17 36.74306390627345 38.0 35.0 40.0 31.0 41.0 18 36.68744074129662 38.0 35.0 40.0 31.0 41.0 19 36.61318932225222 38.0 35.0 40.0 31.0 41.0 20 36.48982814749985 38.0 35.0 40.0 31.0 41.0 21 36.37234627998498 38.0 35.0 40.0 31.0 41.0 22 36.269968337091534 38.0 35.0 40.0 30.0 41.0 23 36.212115568109006 38.0 35.0 40.0 30.0 41.0 24 36.09687535977153 38.0 34.0 40.0 30.0 41.0 25 35.97545928697276 37.0 34.0 40.0 30.0 41.0 26 35.83303707748883 37.0 34.0 40.0 30.0 41.0 27 35.73432270127466 37.0 34.0 40.0 30.0 41.0 28 35.71742978917313 37.0 34.0 40.0 30.0 41.0 29 35.7248111708043 37.0 34.0 40.0 30.0 41.0 30 35.666901742514796 37.0 34.0 40.0 30.0 41.0 31 35.54585094141849 37.0 34.0 40.0 29.0 41.0 32 35.3944982607401 37.0 34.0 40.0 29.0 41.0 33 35.20903185518846 37.0 34.0 40.0 27.0 41.0 34 35.0579299220814 37.0 34.0 40.0 27.0 41.0 35 34.910990639761934 37.0 34.0 40.0 26.0 41.0 36 34.75793215228816 36.0 33.0 40.0 25.0 41.0 37 34.673204789037506 36.0 33.0 40.0 25.0 41.0 38 34.63070669224774 36.0 33.0 40.0 26.0 41.0 39 34.5542558071269 36.0 33.0 40.0 25.0 41.0 40 34.4032075195339 36.0 33.0 40.0 24.0 41.0 41 34.359279679380656 36.0 33.0 40.0 24.0 41.0 42 34.299510740856604 36.0 33.0 40.0 24.0 41.0 43 34.25967502873652 35.0 33.0 40.0 24.0 41.0 44 34.125458171869376 35.0 33.0 40.0 24.0 41.0 45 34.04518157800992 35.0 33.0 40.0 24.0 41.0 46 33.972466590598536 35.0 33.0 40.0 23.0 41.0 47 33.87787990517402 35.0 33.0 39.0 23.0 41.0 48 33.81230399044266 35.0 33.0 39.0 23.0 41.0 49 33.75856745983669 35.0 33.0 39.0 24.0 41.0 50 33.700152919853 35.0 33.0 39.0 24.0 41.0 51 33.55456924159107 35.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 5.0 14 17.0 15 42.0 16 148.0 17 386.0 18 900.0 19 1706.0 20 3035.0 21 4772.0 22 7089.0 23 10168.0 24 14641.0 25 20106.0 26 26428.0 27 31399.0 28 36191.0 29 41882.0 30 50673.0 31 61078.0 32 76647.0 33 99242.0 34 158384.0 35 213664.0 36 134268.0 37 163155.0 38 214087.0 39 288763.0 40 159.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.95576535572702 23.453939298593944 28.31096797603914 15.279327369639894 2 31.523912337202443 26.42023484679986 28.961826696057173 13.09402611994052 3 29.298346814029085 25.826276537200147 31.325544486898742 13.549832161872025 4 26.336391127634734 28.136469365699057 30.509168259456228 15.017971247209982 5 23.069499873119316 32.79850564091621 29.429808461404466 14.702186024560001 6 22.15740558238836 41.07528515001757 26.060086592298315 10.707222675295759 7 86.9769788413654 4.597420554911609 6.715273118956215 1.7103274847667838 8 87.71662390094507 3.852169840491996 6.424622929298226 2.006583329264713 9 81.98903099927126 6.140120877206623 8.439162671884146 3.431685451637966 10 46.28010553097305 26.77574186019738 14.319976805849652 12.624175802979916 11 40.901931780988875 22.53286390494738 20.91361324236501 15.651591071698737 12 37.00208373642814 20.745744976459264 25.940017082178297 16.312154204934302 13 22.963414362169907 33.540260355543175 26.116866450999645 17.37945883128727 14 18.77225309350775 35.832732081644856 27.86040593379661 17.53460889105078 15 18.364004703927996 22.64949769113324 41.21307576253482 17.77342184240395 16 19.94250888616844 19.936421024460547 39.81919653486145 20.30187355450957 17 19.62117828453701 20.00260391708694 28.61132257891466 31.764895219461387 18 23.12959490403782 22.08754586239383 32.74895888523417 22.033900348334186 19 29.5716978322993 23.27950096411236 25.82585460619069 21.32294659739765 20 30.79077707034012 22.604652452413717 25.835317915974247 20.769252561271916 21 24.926659349177445 25.953699702056433 27.60941725902767 21.510223689738456 22 24.72262556817531 23.625665219443302 25.20905174622176 26.442657466159623 23 22.326238262030007 27.98306730583187 25.222734366099893 24.46796006603823 24 21.86573070313597 23.405839163515747 35.49783941185228 19.230590721496 25 21.2272888099677 24.130656361905896 32.451798902858826 22.19025592526758 26 20.09356018755436 30.221049655854987 26.836921856568775 22.848468300021878 27 20.69559546219227 30.256190481356978 27.571443468176454 21.476770588274295 28 19.56741221876038 27.00816557055018 34.16098114631422 19.26344106437522 29 19.918579370346325 24.56735495669481 32.44414386883009 23.069921804128775 30 20.81789517907656 28.817767394256556 29.967107464019833 20.39722996264705 31 28.322360113294504 25.57745779333699 25.19548967806061 20.9046924153079 32 29.25121109268679 25.147992301567353 26.620893179726334 18.979903426019522 33 28.066006887119592 25.76135943760213 24.9621618298304 21.210471845447877 34 21.95921855966014 26.39063940027932 27.229016316072137 24.421125723988403 35 22.44703108245195 24.733836877855193 29.733779615789622 23.085352423903235 36 29.453979080660552 25.506332280314087 24.648064331218254 20.39162430780711 37 22.550524731486117 31.301735522793617 26.49690573880421 19.65083400691605 38 23.49715708913413 30.459862607208148 24.294184766000075 21.748795537657646 39 23.08028925178974 29.988686221360677 25.75714012750755 21.17388439934203 40 25.52339034826788 25.68902840740935 25.696261510428624 23.09131973389414 41 20.11773080681045 24.998869827653238 27.15632363072839 27.727075734807922 42 22.09037882774305 26.42348974315854 24.9171357635354 26.568995665563016 43 22.888310642486402 25.56968220759126 26.36634822930624 25.17565892061609 44 21.36501914662645 27.776562214631483 28.150694468303637 22.70772417043843 45 20.264442246384803 32.34945049513604 24.634020056189154 22.75208720229 46 22.7791510627538 30.457813228019354 25.553528277514875 21.209507431711973 47 22.38723743082592 26.99785839874771 26.834390270512028 23.78051389991435 48 23.10506262963077 24.619794953584577 29.941008017291935 22.33413439949272 49 22.41755618764839 25.041605411325474 30.327677649530845 22.21316075149529 50 21.917025458714352 30.31218675389789 26.57809732019561 21.19269046719215 51 21.010536822823333 30.758228106753364 25.316644153633522 22.914590916789777 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1353.0 1 2093.5 2 2834.0 3 9000.0 4 15166.0 5 11058.5 6 6951.0 7 6990.5 8 7030.0 9 7349.5 10 7669.0 11 7853.0 12 8037.0 13 7669.5 14 7302.0 15 6996.5 16 6691.0 17 6332.5 18 5974.0 19 5926.0 20 5878.0 21 6378.0 22 6878.0 23 6759.5 24 6641.0 25 8107.5 26 11939.5 27 14305.0 28 17058.5 29 19812.0 30 21474.0 31 23136.0 32 26624.5 33 30113.0 34 35022.0 35 39931.0 36 41751.0 37 43571.0 38 50052.0 39 56533.0 40 75640.0 41 94747.0 42 112250.5 43 129754.0 44 131259.5 45 132765.0 46 131078.5 47 129392.0 48 124472.0 49 119552.0 50 114290.0 51 109028.0 52 106196.5 53 103365.0 54 94653.0 55 85941.0 56 85202.0 57 84463.0 58 81362.5 59 78262.0 60 72070.5 61 65879.0 62 61727.5 63 57576.0 64 50232.0 65 42888.0 66 37074.0 67 31260.0 68 25956.5 69 20653.0 70 19211.0 71 17769.0 72 15002.0 73 12235.0 74 9737.5 75 6050.0 76 4860.0 77 3910.5 78 2961.0 79 2382.0 80 1803.0 81 1381.0 82 959.0 83 551.5 84 144.0 85 115.0 86 86.0 87 64.5 88 43.0 89 31.0 90 19.0 91 11.0 92 3.0 93 4.0 94 5.0 95 6.0 96 7.0 97 4.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1659039.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.186370834475717 #Duplication Level Percentage of deduplicated Percentage of total 1 78.1637224119502 13.433507191747967 2 5.969353635218351 2.051830504339765 3 2.168946288113201 1.1182894568271924 4 1.2195267015961526 0.8383695254470596 5 0.840666447580755 0.7224002658112099 6 0.6000232019721728 0.618733275502997 7 0.5063391686528489 0.6091492904341602 8 0.4165197594769371 0.5726770437005817 9 0.38507211464585267 0.5956192944287435 >10 6.209571823567812 26.85663114340411 >50 2.7329802654126882 33.356258377644714 >100 0.7809518392806172 17.774728913309367 >500 0.00456902516230723 0.4619683847177741 >1k 0.0014058538960945322 0.4629952495896625 >5k 3.5146347402363306E-4 0.5268420830947209 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8722 0.5257260377845246 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3391 0.2043954361530983 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1890 0.11392137255362893 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014586757755544022 0.0 2 0.0 0.0 0.0 0.056840134559826505 0.0 3 0.0 0.0 0.0 0.08275875371223944 0.0 4 0.0 0.0 0.0 0.12055171698796713 0.0 5 0.0 0.0 0.0 0.18824150607671067 0.0 6 0.0 0.0 0.0 0.2922776378373263 0.0 7 0.0 0.0 0.0 0.34387377270817626 0.0 8 0.0 0.0 0.0 0.5058952803400041 0.0 9 0.0 0.0 0.0 0.5893773443541713 0.0 10 0.0 0.0 0.0 0.7391628527117204 0.0 11 0.0 0.0 0.0 0.850854018501072 0.0 12 0.0 0.0 0.0 0.9593505637902424 0.0 13 0.0 0.0 0.0 1.0072698712929593 0.0 14 0.0 0.0 0.0 1.026919801161998 0.0 15 0.0 0.0 0.0 1.052898696172905 0.0 16 0.0 0.0 0.0 1.1009385553926099 0.0 17 0.0 0.0 0.0 1.154885448744725 0.0 18 6.0275858493983565E-5 0.0 0.0 1.242647098711965 0.0 19 6.0275858493983565E-5 0.0 0.0 1.279596199968777 0.0 20 6.0275858493983565E-5 0.0 0.0 1.3211865423296258 0.0 21 6.0275858493983565E-5 0.0 0.0 1.3696483325587885 0.0 22 6.0275858493983565E-5 0.0 0.0 1.4212444674296385 0.0 23 6.0275858493983565E-5 0.0 0.0 1.4784462571404289 0.0 24 6.0275858493983565E-5 0.0 0.0 1.5219654269730851 0.0 25 6.0275858493983565E-5 0.0 0.0 1.5605419764092345 0.0 26 1.2055171698796713E-4 0.0 0.0 1.599118525845384 0.0 27 1.2055171698796713E-4 0.0 0.0 1.643059626687498 0.0 28 1.2055171698796713E-4 0.0 0.0 1.6847102449068407 0.0 29 1.2055171698796713E-4 0.0 0.0 1.727747207871545 0.0 30 1.2055171698796713E-4 0.0 0.0 1.7978480313000478 0.0 31 1.2055171698796713E-4 0.0 0.0 1.8476358904160781 0.0 32 1.2055171698796713E-4 0.0 0.0 1.8980867839755424 0.0 33 1.808275754819507E-4 0.0 0.0 1.9485979533935007 0.0 34 1.808275754819507E-4 0.0 0.0 1.9999529848303748 0.0 35 1.808275754819507E-4 0.0 0.0 2.064990636145383 0.0 36 1.808275754819507E-4 0.0 0.0 2.1186361502050284 0.0 37 1.808275754819507E-4 0.0 0.0 2.1770434570856985 0.0 38 1.808275754819507E-4 0.0 0.0 2.237982350023116 0.0 39 1.808275754819507E-4 0.0 0.0 2.296329381045292 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACGT 25 3.891556E-5 45.000004 25 TCGAATA 20 7.034193E-4 45.0 1 TACGGGA 355 0.0 43.732395 4 CGATATC 90 0.0 42.5 10 ACGGGAT 340 0.0 40.367645 5 CGGGATA 145 0.0 40.344826 6 CGTTTTT 5710 0.0 40.074432 1 TATTACG 45 1.9292202E-8 40.0 1 CGCATCG 155 0.0 39.193546 21 TCGTTTG 75 0.0 39.0 1 GGTACCT 995 0.0 38.668343 8 TCGATAG 35 6.249964E-6 38.57143 1 CGGTCTA 140 0.0 38.57143 31 TAATCGC 35 6.249964E-6 38.57143 33 GCGATAC 130 0.0 38.076927 9 TCGTAAG 65 9.094947E-12 38.076927 1 TATGGGT 345 0.0 37.826084 4 AGGGATT 1285 0.0 37.82101 6 ATAGGGC 775 0.0 37.741936 4 CGCATTA 30 1.1401401E-4 37.500004 38 >>END_MODULE