SRR1545506_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545506_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3382098
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27251	0.8057424710933865	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTCTA	355	0.0	42.464787	31
CGTTTTT	16525	0.0	41.22844	1
TATGGGC	1225	0.0	38.7551	4
GGACGTA	105	0.0	38.57143	8
GGCGATA	1735	0.0	38.51585	8
GGGCGAT	8050	0.0	38.459625	7
GCTACGA	360	0.0	38.125	10
TAGGGCG	1865	0.0	38.123325	5
ATAGGGC	1915	0.0	38.06789	4
GTTGATC	2725	0.0	37.899082	16
TCACGAC	405	0.0	37.77778	25
TATACGG	245	0.0	37.65306	2
TAGGGTA	1385	0.0	37.527073	5
CTAAGCG	90	0.0	37.5	1
TATACGC	30	1.140391E-4	37.499996	15
CAATACG	30	1.140391E-4	37.499996	1
TAACGGG	865	0.0	37.19653	3
ATAGGGA	3770	0.0	37.062332	4
CATATGC	2675	0.0	36.925232	33
AGCATAT	2680	0.0	36.856342	31