##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545506_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3382098 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.037754376129847 31.0 31.0 33.0 30.0 34.0 2 31.322140872322446 31.0 31.0 34.0 30.0 34.0 3 31.410603714026028 31.0 31.0 34.0 30.0 34.0 4 35.21237232037629 37.0 35.0 37.0 32.0 37.0 5 35.08051333817057 37.0 35.0 37.0 32.0 37.0 6 35.12286840889885 37.0 35.0 37.0 32.0 37.0 7 35.716358603446736 37.0 35.0 37.0 35.0 37.0 8 35.69828698044823 37.0 35.0 37.0 35.0 37.0 9 37.32671909566192 39.0 37.0 39.0 35.0 39.0 10 36.56933713925498 39.0 35.0 39.0 32.0 39.0 11 36.2919312213898 38.0 35.0 39.0 31.0 39.0 12 35.82352728986564 37.0 35.0 39.0 30.0 39.0 13 35.64295091390019 37.0 35.0 39.0 30.0 39.0 14 36.657295560329715 38.0 35.0 40.0 31.0 41.0 15 36.81997180448349 38.0 35.0 41.0 31.0 41.0 16 36.86554824845407 38.0 35.0 41.0 31.0 41.0 17 36.7663621811077 38.0 35.0 40.0 31.0 41.0 18 36.65534558726566 38.0 35.0 40.0 31.0 41.0 19 36.58151242217109 38.0 35.0 40.0 31.0 41.0 20 36.46584486907239 38.0 35.0 40.0 30.0 41.0 21 36.349858874580214 38.0 35.0 40.0 30.0 41.0 22 36.246358325512745 38.0 35.0 40.0 30.0 41.0 23 36.13755426365528 38.0 34.0 40.0 30.0 41.0 24 36.024717497837145 38.0 34.0 40.0 30.0 41.0 25 35.9103648090623 38.0 34.0 40.0 30.0 41.0 26 35.734344776526285 38.0 34.0 40.0 29.0 41.0 27 35.63490265509752 37.0 34.0 40.0 29.0 41.0 28 35.59872629356098 37.0 34.0 40.0 29.0 41.0 29 35.547679280730485 37.0 34.0 40.0 29.0 41.0 30 35.447310515543904 37.0 34.0 40.0 28.0 41.0 31 35.3335074855903 37.0 34.0 40.0 27.0 41.0 32 35.19300120812584 37.0 34.0 40.0 27.0 41.0 33 34.9685183575402 37.0 33.0 40.0 26.0 41.0 34 34.774856316996136 37.0 33.0 40.0 25.0 41.0 35 34.60263185750383 37.0 33.0 40.0 24.0 41.0 36 34.467903650337746 37.0 33.0 40.0 24.0 41.0 37 34.42087219234924 37.0 33.0 40.0 24.0 41.0 38 34.34025536811766 37.0 33.0 40.0 23.0 41.0 39 34.253459834694326 37.0 33.0 40.0 23.0 41.0 40 34.102028385930865 36.0 33.0 40.0 23.0 41.0 41 33.9988252853702 36.0 33.0 40.0 23.0 41.0 42 33.937097624019174 36.0 33.0 40.0 23.0 41.0 43 33.874173368128304 36.0 33.0 40.0 23.0 41.0 44 33.749135891390495 36.0 33.0 40.0 23.0 41.0 45 33.65507504513471 35.0 32.0 40.0 23.0 41.0 46 33.57560721185489 35.0 32.0 40.0 23.0 41.0 47 33.46364712081081 35.0 32.0 39.0 22.0 41.0 48 33.34592049077229 35.0 32.0 39.0 22.0 41.0 49 33.28861197990123 35.0 32.0 39.0 22.0 41.0 50 33.24393024684678 35.0 32.0 39.0 22.0 41.0 51 33.078540598173085 35.0 31.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 4.0 13 14.0 14 56.0 15 163.0 16 474.0 17 1202.0 18 2592.0 19 4767.0 20 8296.0 21 12749.0 22 18437.0 23 26260.0 24 35775.0 25 48748.0 26 63658.0 27 75030.0 28 83679.0 29 94972.0 30 110711.0 31 131172.0 32 157440.0 33 194816.0 34 283994.0 35 359851.0 36 288163.0 37 343791.0 38 444846.0 39 590141.0 40 292.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.07068630181621 23.061366051486385 26.706381660141133 16.161565986556273 2 34.056464360287606 24.84239072906817 27.982630899518586 13.11851401112564 3 28.814274453312706 25.951199521716994 31.61141398031636 13.62311204465394 4 26.549171549730378 28.103413916450677 30.57466105358272 14.772753480236231 5 23.384360831649467 32.281471441690925 29.392377157610454 14.941790569049152 6 21.63180960457089 41.0786145167881 26.811257391122318 10.478318487518694 7 85.85658960798888 4.242662394762068 7.974251485320651 1.9264965119283946 8 85.67472024760961 3.9154986047122233 8.104821326880533 2.304959820797623 9 79.75951613465962 6.388904165402659 10.216587455478818 3.634992244458913 10 40.479637195610536 29.875864034690892 15.915387431115244 13.72911133858333 11 36.05974752949205 24.555202126017637 23.66684821078514 15.718202133705173 12 33.73261212419037 21.011809829283482 27.527883579955397 17.72769446657075 13 24.310708914998916 27.877607331307374 28.14202900093374 19.669654752759975 14 19.819827811021444 31.153887320828673 29.408609685467425 19.617675182682465 15 19.48988468104709 23.720306153162916 37.680694054400554 19.10911511138944 16 21.668147995711536 21.04876913679024 37.174676783463994 20.10840608403423 17 21.05914731033814 20.98803760269513 30.372804099703792 27.580010987262938 18 23.09462942824247 22.795968656141838 31.6099947429081 22.499407172707592 19 28.333241674250715 24.053087757953794 26.557657406733924 21.056013161061564 20 30.646036868239772 22.641508318209585 26.17224574805343 20.540209065497216 21 26.462479798042516 25.149152981374286 27.510350084474194 20.878017136109005 22 25.34959069784495 23.87659967274751 26.30881778115241 24.464991848255135 23 23.92949583365118 27.127629063380187 26.298528309942526 22.644346793026106 24 22.797713135456156 23.614986910491652 32.61543574432201 20.971864209730175 25 23.168370638579958 23.959772898360722 30.281381556655067 22.59047490640425 26 21.82183958004765 28.569456000387927 27.173044660444496 22.43565975911993 27 22.58769556647974 27.562891436025804 27.58246508528138 22.26694791221307 28 21.34802125781098 27.059801342243777 31.41981693020131 20.17236046974393 29 22.466350768073546 24.764924020534 30.960782330967344 21.80794288042511 30 22.79898453563439 26.130940025983872 29.256780850229653 21.81329458815209 31 26.093507639341023 26.09149705301266 25.981565288764546 21.83343001888177 32 28.25086676967965 25.314937651126606 26.475371204500874 19.958824374692867 33 26.829559640199662 25.69130167132945 26.152435559229804 21.326703129241082 34 22.91148866768497 26.919651648178146 27.556534435134637 22.612325249002247 35 23.89108772129016 24.781895734541102 28.590714994065813 22.736301550102926 36 26.338858306293904 27.5759898146062 25.0426510408628 21.042500838237093 37 23.560819349409744 29.357398868986056 27.112224424011366 19.969557357592834 38 23.88212878515052 29.268637396077818 24.730684918059737 22.118548900711925 39 23.85205869256302 28.155925700556285 25.685122075114325 22.306893531766377 40 24.661083150163005 25.425667736416862 27.86152264068043 22.051726472739702 41 20.665959413358216 26.000813696114065 28.529924325078692 24.80330256544902 42 23.23069881475936 26.946617158935076 25.129815871686745 24.692868154618818 43 22.92071371083866 26.393972025647983 26.95427512745048 23.731039136062883 44 22.921157222528738 27.404202953314776 27.323602095504036 22.35103772865245 45 21.643311341066994 28.768622316680357 25.64848800951362 23.93957833273903 46 22.421408250145326 29.019649933266273 25.819121740410832 22.739820076177566 47 23.65422291134083 27.52004820676397 26.449854498598206 22.375874383296996 48 23.460940516803475 25.208790519967195 28.228425078161546 23.101843885067787 49 22.47776380223163 26.570105301502206 28.349799444013748 22.602331452252418 50 21.644464471461205 28.603635967970177 26.975563688574372 22.776335871994245 51 20.656113453838415 28.80232920512652 26.827992565561377 23.713564775473685 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3048.0 1 4506.0 2 5964.0 3 25455.0 4 44946.0 5 31588.5 6 18231.0 7 18143.5 8 18056.0 9 18545.0 10 19034.0 11 19053.0 12 19072.0 13 18575.5 14 18079.0 15 17643.5 16 17208.0 17 16237.0 18 15266.0 19 15330.5 20 15395.0 21 15649.0 22 15903.0 23 16264.0 24 16625.0 25 18272.5 26 22419.0 27 24918.0 28 30342.0 29 35766.0 30 44633.0 31 53500.0 32 56772.0 33 60044.0 34 69451.0 35 78858.0 36 85967.5 37 93077.0 38 103245.0 39 113413.0 40 138463.0 41 163513.0 42 187978.0 43 212443.0 44 226814.0 45 241185.0 46 244234.5 47 247284.0 48 239250.0 49 231216.0 50 217968.0 51 204720.0 52 197304.5 53 189889.0 54 186129.5 55 182370.0 56 181585.0 57 180800.0 58 183413.5 59 186027.0 60 177310.5 61 168594.0 62 151727.5 63 134861.0 64 116155.0 65 97449.0 66 81746.5 67 66044.0 68 59323.5 69 52603.0 70 46549.5 71 40496.0 72 35739.5 73 30983.0 74 25938.0 75 16587.5 76 12282.0 77 9486.5 78 6691.0 79 4973.5 80 3256.0 81 2300.5 82 1345.0 83 913.5 84 482.0 85 326.0 86 170.0 87 140.5 88 111.0 89 79.0 90 47.0 91 30.0 92 13.0 93 8.5 94 4.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3382098.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.054800964584935 #Duplication Level Percentage of deduplicated Percentage of total 1 79.31513468800281 14.320189702711373 2 5.888212654334569 2.12621015022322 3 2.245015299299909 1.215999131739238 4 1.2808026846134042 0.9249855018240426 5 0.9335194965915107 0.8427254353759626 6 0.6837259273094282 0.7406721319138797 7 0.5448849323066481 0.6886452300978508 8 0.41018717557057044 0.5924678250521525 9 0.3589688398450545 0.5832999860301383 >10 5.142264157422586 23.309552285680592 >50 2.2351428117585663 29.093470563371493 >100 0.9537252730954938 23.359933036700838 >500 0.005775727347765269 0.6813629566439247 >1k 0.0024753117204708297 0.7085650371641006 >5k 0.0 0.0 >10k+ 1.6502078136472196E-4 0.8119210254713188 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27251 0.8057424710933865 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.9134892010816956E-5 0.0 0.0 0.018420518861369483 0.0 2 5.9134892010816956E-5 0.0 0.0 0.062269041287390255 0.0 3 5.9134892010816956E-5 0.0 0.0 0.10390000526300538 0.0 4 8.870233801622543E-5 0.0 0.0 0.1555839008804594 0.0 5 8.870233801622543E-5 0.0 0.0 0.2564975940969185 0.0 6 8.870233801622543E-5 0.0 0.0 0.4750305875228926 0.0 7 8.870233801622543E-5 0.0 0.0 0.5942465298166996 0.0 8 8.870233801622543E-5 0.0 0.0 0.9205824313783929 0.0 9 8.870233801622543E-5 0.0 0.0 1.095326037270357 0.0 10 8.870233801622543E-5 0.0 0.0 1.3417706997254366 0.0 11 1.1826978402163391E-4 0.0 0.0 1.4951961770475013 0.0 12 1.1826978402163391E-4 0.0 0.0 1.6260616930674392 0.0 13 1.478372300270424E-4 0.0 0.0 1.6907848323732784 0.0 14 1.478372300270424E-4 0.0 0.0 1.7289268377202553 0.0 15 1.478372300270424E-4 0.0 0.0 1.762929400626475 0.0 16 1.478372300270424E-4 0.0 0.0 1.8235426649375623 0.0 17 1.7740467603245087E-4 0.0 0.0 1.8869057017271529 0.0 18 1.7740467603245087E-4 0.0 0.0 1.9897412789339635 5.9134892010816956E-5 19 1.7740467603245087E-4 0.0 0.0 2.037906648476774 5.9134892010816956E-5 20 1.7740467603245087E-4 0.0 0.0 2.0922220467887094 5.9134892010816956E-5 21 1.7740467603245087E-4 0.0 0.0 2.1571521582165865 5.9134892010816956E-5 22 1.7740467603245087E-4 0.0 0.0 2.2246842048929394 5.9134892010816956E-5 23 1.7740467603245087E-4 0.0 0.0 2.30002205731472 5.9134892010816956E-5 24 1.7740467603245087E-4 0.0 0.0 2.364538224498521 5.9134892010816956E-5 25 1.7740467603245087E-4 0.0 0.0 2.419444971730565 5.9134892010816956E-5 26 1.7740467603245087E-4 0.0 0.0 2.476480575074998 5.9134892010816956E-5 27 1.7740467603245087E-4 0.0 0.0 2.5354676298557877 5.9134892010816956E-5 28 1.7740467603245087E-4 0.0 0.0 2.59534170801674 5.9134892010816956E-5 29 1.7740467603245087E-4 0.0 0.0 2.6599465775385576 5.9134892010816956E-5 30 1.7740467603245087E-4 0.0 0.0 2.7557155351500753 5.9134892010816956E-5 31 1.7740467603245087E-4 0.0 0.0 2.831881276060008 5.9134892010816956E-5 32 1.7740467603245087E-4 0.0 0.0 2.9122160268567026 5.9134892010816956E-5 33 1.7740467603245087E-4 0.0 0.0 2.9879973909685646 5.9134892010816956E-5 34 1.7740467603245087E-4 0.0 0.0 3.068243439427243 5.9134892010816956E-5 35 1.7740467603245087E-4 0.0 0.0 3.1520967162985816 5.9134892010816956E-5 36 1.7740467603245087E-4 0.0 0.0 3.235979560615925 5.9134892010816956E-5 37 1.7740467603245087E-4 0.0 0.0 3.324060982266037 5.9134892010816956E-5 38 1.7740467603245087E-4 0.0 0.0 3.4175236790891335 5.9134892010816956E-5 39 1.7740467603245087E-4 0.0 0.0 3.510217622316089 5.9134892010816956E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 355 0.0 42.464787 31 CGTTTTT 16525 0.0 41.22844 1 TATGGGC 1225 0.0 38.7551 4 GGACGTA 105 0.0 38.57143 8 GGCGATA 1735 0.0 38.51585 8 GGGCGAT 8050 0.0 38.459625 7 GCTACGA 360 0.0 38.125 10 TAGGGCG 1865 0.0 38.123325 5 ATAGGGC 1915 0.0 38.06789 4 GTTGATC 2725 0.0 37.899082 16 TCACGAC 405 0.0 37.77778 25 TATACGG 245 0.0 37.65306 2 TAGGGTA 1385 0.0 37.527073 5 CTAAGCG 90 0.0 37.5 1 TATACGC 30 1.140391E-4 37.499996 15 CAATACG 30 1.140391E-4 37.499996 1 TAACGGG 865 0.0 37.19653 3 ATAGGGA 3770 0.0 37.062332 4 CATATGC 2675 0.0 36.925232 33 AGCATAT 2680 0.0 36.856342 31 >>END_MODULE