##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545503_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4316078 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.096639588070467 31.0 31.0 33.0 30.0 34.0 2 31.378435931880748 31.0 31.0 34.0 30.0 34.0 3 31.489304410161264 31.0 31.0 34.0 30.0 34.0 4 35.260243211545294 37.0 35.0 37.0 33.0 37.0 5 35.129177924958725 37.0 35.0 37.0 32.0 37.0 6 35.17558487126507 37.0 35.0 37.0 32.0 37.0 7 35.75584593234877 37.0 35.0 37.0 35.0 37.0 8 35.74760743434201 37.0 35.0 37.0 35.0 37.0 9 37.406051744199246 39.0 37.0 39.0 35.0 39.0 10 36.652818832282456 39.0 35.0 39.0 32.0 39.0 11 36.32955335839621 38.0 35.0 39.0 32.0 39.0 12 35.61952286311786 37.0 35.0 39.0 30.0 39.0 13 35.292365661602965 37.0 35.0 39.0 30.0 39.0 14 36.24560839725325 38.0 35.0 40.0 30.0 41.0 15 36.511219445061 38.0 35.0 40.0 31.0 41.0 16 36.62772591227499 38.0 35.0 40.0 31.0 41.0 17 36.553778916877775 38.0 35.0 40.0 31.0 41.0 18 36.481780681442736 38.0 35.0 40.0 31.0 41.0 19 36.42011173106695 38.0 35.0 40.0 31.0 41.0 20 36.318917313357176 38.0 35.0 40.0 31.0 41.0 21 36.1750475779168 38.0 34.0 40.0 30.0 41.0 22 36.07466130130178 38.0 34.0 40.0 30.0 41.0 23 36.00304721091695 37.0 34.0 40.0 30.0 41.0 24 35.915620848372065 37.0 34.0 40.0 30.0 41.0 25 35.796755990044666 37.0 34.0 40.0 30.0 41.0 26 35.64725846011124 37.0 34.0 40.0 29.0 41.0 27 35.53899605150787 37.0 34.0 40.0 29.0 41.0 28 35.53669998549609 37.0 34.0 40.0 29.0 41.0 29 35.552928607870385 37.0 34.0 40.0 29.0 41.0 30 35.48266574422427 37.0 34.0 40.0 29.0 41.0 31 35.354056391010545 37.0 34.0 40.0 29.0 41.0 32 35.20979370623052 37.0 34.0 40.0 28.0 41.0 33 35.02566033329333 37.0 34.0 40.0 27.0 41.0 34 34.8818538497219 37.0 34.0 40.0 26.0 41.0 35 34.75277995439378 36.0 33.0 40.0 26.0 41.0 36 34.57799071286478 36.0 33.0 40.0 24.0 41.0 37 34.51057464670472 36.0 33.0 40.0 24.0 41.0 38 34.4600996552889 36.0 33.0 40.0 24.0 41.0 39 34.411477966802266 36.0 33.0 40.0 24.0 41.0 40 34.271694348433925 36.0 33.0 40.0 24.0 41.0 41 34.20006635653943 36.0 33.0 40.0 23.0 41.0 42 34.16091901026812 36.0 33.0 40.0 23.0 41.0 43 34.09493317775999 35.0 33.0 40.0 23.0 41.0 44 33.980208652392285 35.0 33.0 40.0 23.0 41.0 45 33.90963207801156 35.0 33.0 40.0 23.0 41.0 46 33.85487866530679 35.0 33.0 40.0 23.0 41.0 47 33.75393169446891 35.0 33.0 39.0 23.0 41.0 48 33.67717010674969 35.0 33.0 39.0 23.0 41.0 49 33.65141709672531 35.0 32.0 39.0 24.0 41.0 50 33.5753860333386 35.0 32.0 39.0 23.0 41.0 51 33.42039022464376 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 4.0 12 9.0 13 19.0 14 61.0 15 157.0 16 501.0 17 1367.0 18 2727.0 19 5660.0 20 9416.0 21 14591.0 22 21782.0 23 30801.0 24 42903.0 25 58025.0 26 75029.0 27 88986.0 28 100806.0 29 116120.0 30 137714.0 31 166777.0 32 204540.0 33 258383.0 34 403596.0 35 545787.0 36 333868.0 37 402467.0 38 533160.0 39 760397.0 40 421.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.42286677858927 24.645453580774028 27.17580636865228 14.755873271984427 2 30.812001080610685 26.567962858873262 29.3355680782414 13.284467982274647 3 29.451112792678906 25.81037692089902 31.052705720332206 13.685804566089862 4 26.08729499327862 28.519340938694803 30.10089252325838 15.29247154476819 5 23.352983889540457 32.792178454606244 29.337259428583078 14.517578227270219 6 21.829030893324912 41.76138614733098 26.086507241064687 10.32307571827942 7 87.35660013558606 4.556660004754316 6.56779140692082 1.518948452738806 8 88.04678692090366 3.631746228867968 6.37150209055536 1.949964759673018 9 82.4505256855877 6.053713579782386 8.15963010863103 3.3361306259988814 10 45.7816564019464 29.27926696412808 13.289634710030725 11.649441923894795 11 40.8574173126621 22.754662913876906 21.53800278864284 14.849916984818162 12 37.021203045913445 21.29002302553383 25.766587165477546 15.92218676307518 13 23.14059199115493 34.36592202457879 25.765034830232448 16.728451154033824 14 18.18750726933109 37.35002008768146 27.561758615113074 16.90071402787438 15 17.376493195906097 23.969654857952058 41.80047255865163 16.853379387490218 16 19.70863362524959 19.771676971546853 40.94805515562972 19.571634247573837 17 19.63196679948787 20.180311847932312 29.170742512067672 31.01697884051215 18 22.309953619929946 22.609994536706704 33.46966852776988 21.610383315593463 19 28.9136109217674 24.136496143026147 25.962343590639463 20.98754934456699 20 30.920595040219386 23.101853117575725 25.41330346671214 20.56424837549275 21 24.862711007539716 26.390000366073085 27.808834780094337 20.938453846292862 22 24.47967807810702 23.8821448546574 25.587860089646203 26.05031697758938 23 21.68971459737289 28.890349062273668 25.805696745980956 23.61423959437248 24 21.03833619318279 23.97961760654001 35.169359775240395 19.812686425036805 25 19.93133580996451 24.99041954292763 33.64830292687018 21.42994172023768 26 19.437206649184745 31.305666857735194 27.444175012592453 21.812951480487612 27 20.385776160671796 30.820457832319065 27.92625619833562 20.867509808673525 28 18.397721264536923 28.76745971690039 33.80937508543636 19.025443933126322 29 19.38148476464049 24.486026434183998 33.66090696229308 22.47158183888243 30 20.141665651084157 29.019540425358393 29.82119414894726 21.01759977461019 31 27.63520492447078 26.466736699383098 25.274913938070625 20.623144438075496 32 28.80965079871124 26.11769296106326 26.580103510640914 18.49255272958459 33 27.713400916294837 26.577137855247283 25.014191124442142 20.695270104015727 34 21.0470246367188 27.697576364467924 27.480203091788425 23.775195907024848 35 22.06009715301716 25.599282496748206 29.15334245581289 23.18727789442174 36 28.756547031819164 25.977519405349025 25.396019256371176 19.869914306460636 37 22.61574049403185 31.51625155986523 26.541758513168666 19.326249432934254 38 22.251822140378373 31.652625369606387 24.033092080356287 22.062460409658954 39 22.32777072147445 30.123853183376205 25.943460706687876 21.604915388461468 40 24.81208634320325 26.197325442218606 26.015794895272975 22.974793319305164 41 19.207322017813393 25.72543869689102 27.466255243765286 27.600984041530296 42 22.0904951208018 26.23627283844268 25.23807493747796 26.435157103277557 43 22.073859647578196 26.010118445496122 27.21644511521803 24.699576791707656 44 20.91512247925084 28.66438002278921 28.03276493149568 22.387732566464276 45 19.9947962015515 32.63365490614395 24.565311377597904 22.80623751470664 46 22.36127335974929 31.28569502219376 25.583040899631566 20.769990718425387 47 22.33043517749216 27.774382205326226 26.71070819387416 23.184474423307456 48 23.069508938439018 25.299797640357752 29.479495041563197 22.151198379640032 49 22.46882470613367 25.457278575595716 30.303414349787005 21.77048236848361 50 21.168825030502227 31.21083539268753 26.693261799253857 20.927077777556384 51 20.18218855173609 31.575379314275597 25.22218087810276 23.02025125588555 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4033.0 1 5841.5 2 7650.0 3 21897.5 4 36145.0 5 26489.0 6 16833.0 7 17534.0 8 18235.0 9 18808.5 10 19382.0 11 19917.0 12 20452.0 13 19653.0 14 18854.0 15 18191.0 16 17528.0 17 16900.0 18 16272.0 19 17630.0 20 18988.0 21 19984.5 22 20981.0 23 21365.5 24 21750.0 25 22479.0 26 27223.5 27 31239.0 28 40077.0 29 48915.0 30 57235.0 31 65555.0 32 76216.0 33 86877.0 34 96440.5 35 106004.0 36 117881.0 37 129758.0 38 145516.5 39 161275.0 40 217296.0 41 273317.0 42 316285.5 43 359254.0 44 367747.5 45 376241.0 46 363578.5 47 350916.0 48 335782.5 49 320649.0 50 297898.5 51 275148.0 52 271035.5 53 266923.0 54 244873.0 55 222823.0 56 211431.0 57 200039.0 58 190944.5 59 181850.0 60 172326.5 61 162803.0 62 147407.5 63 132012.0 64 111712.0 65 91412.0 66 79090.0 67 66768.0 68 57202.5 69 47637.0 70 40700.5 71 33764.0 72 29217.0 73 24670.0 74 20269.5 75 13402.5 76 10936.0 77 8925.0 78 6914.0 79 5376.0 80 3838.0 81 2663.5 82 1489.0 83 978.0 84 467.0 85 379.5 86 292.0 87 177.0 88 62.0 89 48.5 90 35.0 91 21.0 92 7.0 93 6.0 94 5.0 95 3.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4316078.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.262800915297133 #Duplication Level Percentage of deduplicated Percentage of total 1 80.95468911724262 11.546406140390031 2 7.23290054191343 2.06322840938912 3 2.388307299510764 1.0219185461241886 4 1.2469940590461732 0.7114251202693539 5 0.8109717672946816 0.5783364432425359 6 0.5945330171728508 0.5087823636904382 7 0.41721093332553116 0.4165417537195151 8 0.34335988589854355 0.39178189558960524 9 0.2616510910290155 0.33586896785554227 >10 2.561906761976734 8.504051597481745 >50 1.080992583273002 11.292067052123848 >100 2.079824913042128 59.222417084854186 >500 0.023714197820850196 2.140161739856503 >1k 0.0026167390698869186 0.6277798439738642 >5k 1.635461918679324E-4 0.1536501256736835 >10k+ 1.635461918679324E-4 0.48558291576576124 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20817 0.4823128775707946 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6587 0.15261540685780006 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 4715 0.10924269672605547 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3169182762684084E-5 0.0 0.0 0.015013630430219287 0.0 2 2.3169182762684084E-5 0.0 0.0 0.05523533170623886 0.0 3 2.3169182762684084E-5 0.0 0.0 0.08213475289371508 0.0 4 2.3169182762684084E-5 0.0 0.0 0.12729149009818636 0.0 5 4.633836552536817E-5 0.0 0.0 0.21322598896498163 0.0 6 4.633836552536817E-5 0.0 0.0 0.34688900432290615 0.0 7 4.633836552536817E-5 0.0 0.0 0.4200341143046998 0.0 8 4.633836552536817E-5 0.0 0.0 0.6234595389610661 0.0 9 4.633836552536817E-5 0.0 0.0 0.7238516078717762 0.0 10 4.633836552536817E-5 0.0 0.0 0.8814715582063161 0.0 11 4.633836552536817E-5 0.0 0.0 1.005357178438388 0.0 12 4.633836552536817E-5 0.0 0.0 1.1139974764126135 0.0 13 6.950754828805226E-5 0.0 0.0 1.1606602104966592 0.0 14 6.950754828805226E-5 0.0 0.0 1.1794735868999586 0.0 15 6.950754828805226E-5 0.0 0.0 1.2057937785183679 0.0 16 6.950754828805226E-5 0.0 0.0 1.2637630737906034 0.0 17 6.950754828805226E-5 0.0 0.0 1.3268759276361548 0.0 18 6.950754828805226E-5 0.0 0.0 1.4252522776465115 0.0 19 6.950754828805226E-5 0.0 0.0 1.4654971481052936 0.0 20 6.950754828805226E-5 0.0 0.0 1.511094099782256 0.0 21 6.950754828805226E-5 0.0 0.0 1.5723302498240301 0.0 22 6.950754828805226E-5 0.0 0.0 1.635489442035107 0.0 23 9.267673105073634E-5 0.0 0.0 1.71078928601383 0.0 24 9.267673105073634E-5 0.0 0.0 1.7682025208997614 0.0 25 9.267673105073634E-5 0.0 0.0 1.8155834996494502 0.0 26 9.267673105073634E-5 0.0 0.0 1.8667410551894568 0.0 27 9.267673105073634E-5 0.0 0.0 1.914979293701365 0.0 28 9.267673105073634E-5 0.0 0.0 1.9679440454968609 0.0 29 9.267673105073634E-5 0.0 0.0 2.024268328792946 0.0 30 1.1584591381342043E-4 0.0 0.0 2.1061945590417968 0.0 31 1.3901509657610452E-4 0.0 0.0 2.175609430598798 0.0 32 1.3901509657610452E-4 0.0 0.0 2.2424756920519044 0.0 33 1.3901509657610452E-4 0.0 0.0 2.309179769225672 0.0 34 1.3901509657610452E-4 0.0 0.0 2.3773435049134886 0.0 35 1.3901509657610452E-4 0.0 0.0 2.465988798163518 0.0 36 1.3901509657610452E-4 0.0 0.0 2.541080119497377 0.0 37 1.3901509657610452E-4 0.0 0.0 2.616565316938202 0.0 38 1.3901509657610452E-4 0.0 0.0 2.693255311882686 0.0 39 1.3901509657610452E-4 0.0 0.0 2.7808579919083947 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 20 7.035448E-4 45.000004 33 TAATGCG 95 0.0 42.63158 1 TAGTACG 135 0.0 41.666664 1 CGTTTTT 14920 0.0 41.335457 1 AAATGCG 285 0.0 41.05263 1 CGGTCTA 350 0.0 39.857143 31 CGTAAGG 800 0.0 39.375004 2 GCTACGA 600 0.0 39.375004 10 GCGTAAG 410 0.0 38.963413 1 CGAATAT 585 0.0 38.846157 14 TAGGGAC 3215 0.0 38.7014 5 TAGGGCG 1930 0.0 38.58808 5 CGCGAAA 35 6.252292E-6 38.571426 14 TAAGGGA 4180 0.0 38.00239 4 TCGTAAG 225 0.0 38.0 1 CGAGGGA 2345 0.0 37.899788 4 TACGGGA 1380 0.0 37.826088 4 CATACGA 1355 0.0 37.693726 18 ATAGGGC 2025 0.0 37.666668 4 GGGCGAT 9510 0.0 37.618298 7 >>END_MODULE