SRR1545502_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545502_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1410169
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5779	0.4098090370728615	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5531	0.3922224924813976	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAACGG	30	2.1658543E-6	45.000004	2
GCTTACC	65	0.0	45.000004	21
TCCGTTC	30	2.1658543E-6	45.000004	12
TCACGAC	90	0.0	45.0	25
CGGGTGC	55	1.8189894E-12	45.0	6
AGCCGTG	20	7.033831E-4	45.0	37
AACCGCA	20	7.033831E-4	45.0	34
GTCGCGA	35	1.2121927E-7	45.0	17
TCGTTAA	20	7.033831E-4	45.0	38
ACACGTC	35	1.2121927E-7	45.0	21
CTATCGG	20	7.033831E-4	45.0	15
ACGTTAG	35	1.2121927E-7	45.0	1
GCGAACG	20	7.033831E-4	45.0	1
GCGAAAA	20	7.033831E-4	45.0	22
CGTTGTA	20	7.033831E-4	45.0	20
GGCGTAA	35	1.2121927E-7	45.0	36
TTCGTTA	20	7.033831E-4	45.0	37
TGCGCTA	35	1.2121927E-7	45.0	12
CTACGTC	20	7.033831E-4	45.0	34
CGGATGT	20	7.033831E-4	45.0	20