##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545502_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1410169 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.180073452189063 31.0 31.0 33.0 30.0 34.0 2 31.44832215145844 31.0 31.0 34.0 30.0 34.0 3 31.53584144879089 31.0 31.0 34.0 30.0 34.0 4 35.28695213126937 37.0 35.0 37.0 33.0 37.0 5 35.16257413118569 37.0 35.0 37.0 32.0 37.0 6 35.2002362837362 37.0 35.0 37.0 32.0 37.0 7 35.81827142704172 37.0 35.0 37.0 35.0 37.0 8 35.84288337071656 37.0 35.0 37.0 35.0 37.0 9 37.542315850086055 39.0 37.0 39.0 35.0 39.0 10 36.80636008875532 39.0 37.0 39.0 32.0 39.0 11 36.35835775711989 38.0 35.0 39.0 32.0 39.0 12 34.96345402572316 35.0 34.0 39.0 30.0 39.0 13 34.26705167962138 35.0 33.0 39.0 25.0 39.0 14 35.104428618130164 36.0 33.0 40.0 25.0 41.0 15 35.680185140929915 36.0 33.0 40.0 30.0 41.0 16 35.98349630434367 36.0 34.0 40.0 31.0 41.0 17 35.97981518527212 36.0 34.0 40.0 31.0 41.0 18 35.913437325597144 36.0 35.0 40.0 31.0 41.0 19 35.811928215696135 36.0 34.0 40.0 31.0 41.0 20 35.636498178587104 35.0 34.0 40.0 30.0 41.0 21 35.43621721935456 35.0 34.0 40.0 30.0 41.0 22 35.33291187084669 35.0 34.0 40.0 30.0 41.0 23 35.35104019447314 35.0 34.0 40.0 30.0 41.0 24 35.269428699680674 35.0 34.0 40.0 30.0 41.0 25 35.18289509980718 35.0 34.0 40.0 30.0 41.0 26 35.01392386302635 35.0 34.0 39.0 29.0 41.0 27 34.93497942445196 35.0 34.0 39.0 29.0 41.0 28 34.99805980701604 35.0 34.0 39.0 29.0 41.0 29 35.06029419168908 35.0 34.0 39.0 29.0 41.0 30 35.02368439527461 36.0 34.0 39.0 29.0 41.0 31 34.785344877103384 35.0 34.0 39.0 29.0 41.0 32 34.55540860705348 35.0 34.0 39.0 28.0 41.0 33 34.32566096687702 35.0 33.0 39.0 27.0 41.0 34 34.2097840755257 35.0 33.0 39.0 26.0 41.0 35 34.01269422317467 35.0 33.0 39.0 25.0 41.0 36 33.75115181230051 35.0 33.0 39.0 23.0 41.0 37 33.660842778418754 35.0 33.0 39.0 23.0 41.0 38 33.70435032964134 35.0 33.0 39.0 23.0 41.0 39 33.706227409622535 35.0 33.0 39.0 23.0 41.0 40 33.493927323604474 35.0 33.0 39.0 23.0 41.0 41 33.52673048407673 35.0 33.0 39.0 23.0 41.0 42 33.524503800608294 35.0 33.0 39.0 23.0 41.0 43 33.408017053275174 35.0 33.0 39.0 23.0 41.0 44 33.322943562083694 35.0 33.0 39.0 23.0 41.0 45 33.25480208400553 35.0 32.0 38.0 23.0 41.0 46 33.23604121208167 35.0 32.0 38.0 23.0 40.0 47 33.16445830251551 35.0 32.0 38.0 23.0 40.0 48 33.17506483265481 35.0 32.0 38.0 23.0 40.0 49 33.20445492703357 35.0 32.0 38.0 24.0 40.0 50 33.07173537356161 35.0 32.0 38.0 23.0 40.0 51 32.888816872303956 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 1.0 13 5.0 14 12.0 15 51.0 16 163.0 17 410.0 18 929.0 19 1824.0 20 3143.0 21 4953.0 22 7537.0 23 10882.0 24 15660.0 25 21320.0 26 27571.0 27 32287.0 28 35128.0 29 40039.0 30 47508.0 31 58555.0 32 74017.0 33 96556.0 34 169896.0 35 255875.0 36 85504.0 37 97664.0 38 130155.0 39 192373.0 40 148.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.6520707801689 25.530415148822588 29.358041482971192 14.45947258803732 2 29.196571474766497 26.67198045057011 31.267458013897624 12.863990060765767 3 27.01342888689228 25.57955819479793 33.347917873673296 14.059095044636493 4 23.37492882058817 29.471644887953147 32.40157739958828 14.751848891870406 5 22.682742281244305 32.22415185697601 30.537970980783154 14.555134880996533 6 19.99710672976076 40.288433513997255 29.22408590743379 10.490373848808192 7 87.14870345327405 4.920048589920783 6.56460324968142 1.3666447071237562 8 89.26809481700421 3.1957162581222534 5.880075366853193 1.6561135580203508 9 85.18695276949076 4.721845395835535 7.8245940734763 2.2666077611974167 10 59.32494615893557 20.627243968630708 11.139303161535958 8.908506710897772 11 56.32438381498955 17.3563594150772 17.051147770231793 9.268108999701456 12 49.617244457933765 20.374791957559697 19.525106565241472 10.482857019265067 13 20.422445820323663 49.55420236865227 19.806278538246126 10.217073272777943 14 12.724645060272918 50.59684335707281 25.253923465910823 11.424588116743454 15 10.588163546355082 21.554437801426637 55.77693170109398 12.080466951124299 16 11.940696469713915 15.9327002650037 54.671745017795736 17.454858247486648 17 12.978869908500329 15.55657513390239 28.561399378372382 42.9031555792249 18 19.22726992296668 21.357511050093997 37.918859370756266 21.496359656183053 19 30.442734168741474 22.843361327613923 25.24867586792789 21.465228635716713 20 33.004838427167236 21.803131397726087 24.29673322842865 20.895296946678023 21 19.632044102515373 31.536078299834987 28.108191287710905 20.72368630993874 22 21.97495477492414 24.950130090790537 23.757719819397533 29.31719531488779 23 17.07717301968771 32.691046250484874 23.91266578686668 26.319114942960738 24 17.53846524778236 23.009298885452736 44.45325347529268 14.998982391472227 25 13.8423125171522 23.767009486097056 41.92809514320624 20.462582853544504 26 13.952015680390081 39.14729369316727 27.473657412693086 19.42703321374956 27 15.671242241178184 39.37584785937005 27.79496641891858 17.157943480533184 28 12.222223010149849 30.344518990277052 42.36626957478146 15.066988424791639 29 12.66387220255161 23.15743715824132 42.00985839285929 22.168832246347776 30 16.464125931005434 34.22781241113654 31.680032676934466 17.628028980923563 31 30.68532920522292 26.921383181732118 24.02236895010456 18.3709186629404 32 32.681614756812834 25.424895881273805 26.702898730577683 15.190590631335677 33 30.4316007513993 26.64843717313315 23.782823193532124 19.137138881935428 34 18.72449330541233 27.327930198437205 27.479188664621052 26.468387831529412 35 18.874829896274843 24.86581395563227 33.17049233106103 23.08886381703186 36 34.67832578932028 22.550204975432024 24.81943653562091 17.952032699626784 37 19.305558411793196 34.531605786256826 28.752865791263314 17.409970010686663 38 20.08035916262519 35.96767479642511 22.102031742294717 21.849934298654983 39 19.598289283057564 34.16016094524841 26.343083701315233 19.8984660703788 40 25.4609199322918 25.327957145561985 23.958617725960504 25.252505196185705 41 15.614653279145973 23.334508133422304 27.265809984477034 33.78502860295468 42 20.873313765938693 24.26453850566847 24.322616650912053 30.539531077480785 43 20.91316714521451 26.378469530956927 25.81704746026895 26.89131586355962 44 18.499697553981118 30.81928478076032 29.47639609153229 21.20462157372627 45 14.819216703813515 42.36917702771795 21.119738130677952 21.691868137790575 46 21.13363717398411 36.20332031125347 24.52550013509019 18.137542379672222 47 21.300709347603018 27.402602099464673 25.657350289220656 25.639338263711654 48 22.497090774226354 23.388189642518025 32.70359793755217 21.411121645703457 49 20.911819788975645 22.521626840470894 34.66655415060181 21.899999219951653 50 19.123098011656758 36.765664257262785 24.795255036807646 19.315982694272815 51 17.173544447509485 37.831777609634024 21.976656698594283 23.01802124426221 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1341.0 1 1565.0 2 1789.0 3 5437.5 4 9086.0 5 6820.5 6 4555.0 7 5212.5 8 5870.0 9 6828.5 10 7787.0 11 8158.5 12 8530.0 13 8431.5 14 8333.0 15 7786.5 16 7240.0 17 6954.5 18 6669.0 19 6354.5 20 6040.0 21 6134.5 22 6229.0 23 5671.5 24 5114.0 25 5741.0 26 7813.0 27 9258.0 28 10446.0 29 11634.0 30 14508.0 31 17382.0 32 20053.0 33 22724.0 34 27207.0 35 31690.0 36 33285.0 37 34880.0 38 44860.0 39 54840.0 40 85842.5 41 116845.0 42 148688.5 43 180532.0 44 179493.5 45 178455.0 46 163358.0 47 148261.0 48 131129.5 49 113998.0 50 106074.0 51 98150.0 52 89341.0 53 80532.0 54 69279.5 55 58027.0 56 51194.5 57 44362.0 58 39799.5 59 35237.0 60 32537.5 61 29838.0 62 24763.5 63 19689.0 64 16628.0 65 13567.0 66 11241.0 67 8915.0 68 7574.5 69 6234.0 70 4804.0 71 3374.0 72 2749.0 73 2124.0 74 2134.0 75 1685.0 76 1226.0 77 908.0 78 590.0 79 535.0 80 480.0 81 301.0 82 122.0 83 105.0 84 88.0 85 50.5 86 13.0 87 10.0 88 7.0 89 3.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1410169.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.3543825344488 #Duplication Level Percentage of deduplicated Percentage of total 1 81.53974818129271 14.150719817007795 2 7.294060521653761 2.5316783304440107 3 2.430853453704228 1.265578821623076 4 1.1435126270492029 0.793798222511374 5 0.6887593358507496 0.5976496494263402 6 0.4583444082956097 0.4772570516452559 7 0.3505332338993214 0.4258301482488368 8 0.29160401231137134 0.40484860625853236 9 0.22744420297721307 0.35524383333384374 >10 2.6827321797977315 10.994865732114603 >50 1.1734818363671689 14.815682265823154 >100 1.7095217969635281 51.35314127961503 >500 0.00735981639448541 0.7708207919775076 >1k 0.0012266360657475685 0.2603462658349881 >5k 8.177573771650458E-4 0.8025391841356542 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5779 0.4098090370728615 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5531 0.3922224924813976 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03652044542178987 0.0 2 0.0 0.0 0.0 0.12828249663692792 0.0 3 0.0 0.0 0.0 0.18735343068809482 0.0 4 0.0 0.0 0.0 0.3064880875980113 0.0 5 0.0 0.0 0.0 0.5149028237041092 0.0 6 0.0 0.0 0.0 0.7716805574367328 0.0 7 0.0 0.0 0.0 0.9027995935238968 0.0 8 0.0 0.0 0.0 1.3013333862820697 0.0 9 0.0 0.0 0.0 1.475922389444102 0.0 10 0.0 0.0 0.0 1.770213357406098 0.0 11 0.0 0.0 0.0 2.001887717004132 0.0 12 0.0 0.0 0.0 2.2190248119197062 0.0 13 7.091348625590267E-5 0.0 0.0 2.3002916671689704 0.0 14 7.091348625590267E-5 0.0 0.0 2.3293661965338908 0.0 15 7.091348625590267E-5 0.0 0.0 2.373474384985062 0.0 16 7.091348625590267E-5 0.0 0.0 2.473320573633373 0.0 17 7.091348625590267E-5 0.0 0.0 2.5990501847650886 0.0 18 7.091348625590267E-5 0.0 0.0 2.8066139590361154 0.0 19 7.091348625590267E-5 0.0 0.0 2.8795839363934395 7.091348625590267E-5 20 7.091348625590267E-5 0.0 0.0 2.96056713769768 7.091348625590267E-5 21 7.091348625590267E-5 0.0 0.0 3.0694902525867467 7.091348625590267E-5 22 7.091348625590267E-5 0.0 0.0 3.17656961683316 7.091348625590267E-5 23 7.091348625590267E-5 0.0 0.0 3.3028665358549225 7.091348625590267E-5 24 7.091348625590267E-5 0.0 0.0 3.3976778669790644 7.091348625590267E-5 25 7.091348625590267E-5 0.0 0.0 3.4654002463534512 7.091348625590267E-5 26 7.091348625590267E-5 0.0 0.0 3.543688735179968 7.091348625590267E-5 27 7.091348625590267E-5 0.0 0.0 3.619495251987528 7.091348625590267E-5 28 7.091348625590267E-5 0.0 0.0 3.694308979987505 7.091348625590267E-5 29 7.091348625590267E-5 0.0 0.0 3.7764977105580964 7.091348625590267E-5 30 7.091348625590267E-5 0.0 0.0 3.903361937469906 7.091348625590267E-5 31 7.091348625590267E-5 0.0 0.0 4.016185294103047 7.091348625590267E-5 32 7.091348625590267E-5 0.0 0.0 4.106245421648044 7.091348625590267E-5 33 1.4182697251180533E-4 0.0 0.0 4.200702185340906 7.091348625590267E-5 34 1.4182697251180533E-4 0.0 0.0 4.302463038118126 7.091348625590267E-5 35 1.4182697251180533E-4 0.0 0.0 4.455777995403388 7.091348625590267E-5 36 1.4182697251180533E-4 0.0 0.0 4.566544860935108 7.091348625590267E-5 37 1.4182697251180533E-4 0.0 0.0 4.6801482659170635 7.091348625590267E-5 38 1.4182697251180533E-4 0.0 0.0 4.776306953280068 7.091348625590267E-5 39 1.4182697251180533E-4 0.0 0.0 4.883315404040225 7.091348625590267E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAACGG 30 2.1658543E-6 45.000004 2 GCTTACC 65 0.0 45.000004 21 TCCGTTC 30 2.1658543E-6 45.000004 12 TCACGAC 90 0.0 45.0 25 CGGGTGC 55 1.8189894E-12 45.0 6 AGCCGTG 20 7.033831E-4 45.0 37 AACCGCA 20 7.033831E-4 45.0 34 GTCGCGA 35 1.2121927E-7 45.0 17 TCGTTAA 20 7.033831E-4 45.0 38 ACACGTC 35 1.2121927E-7 45.0 21 CTATCGG 20 7.033831E-4 45.0 15 ACGTTAG 35 1.2121927E-7 45.0 1 GCGAACG 20 7.033831E-4 45.0 1 GCGAAAA 20 7.033831E-4 45.0 22 CGTTGTA 20 7.033831E-4 45.0 20 GGCGTAA 35 1.2121927E-7 45.0 36 TTCGTTA 20 7.033831E-4 45.0 37 TGCGCTA 35 1.2121927E-7 45.0 12 CTACGTC 20 7.033831E-4 45.0 34 CGGATGT 20 7.033831E-4 45.0 20 >>END_MODULE