##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545501_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1753560 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.0865456556947 31.0 31.0 33.0 30.0 34.0 2 31.368468715071057 31.0 31.0 34.0 30.0 34.0 3 31.467276853942835 31.0 31.0 34.0 30.0 34.0 4 35.239210520312966 37.0 35.0 37.0 33.0 37.0 5 35.10191496156391 37.0 35.0 37.0 32.0 37.0 6 35.15558692032209 37.0 35.0 37.0 32.0 37.0 7 35.77128470083716 37.0 35.0 37.0 35.0 37.0 8 35.766184789799034 37.0 35.0 37.0 35.0 37.0 9 37.4318437920573 39.0 37.0 39.0 35.0 39.0 10 36.65018533725678 39.0 35.0 39.0 32.0 39.0 11 36.271203722712656 38.0 35.0 39.0 31.0 39.0 12 35.48420983599078 37.0 35.0 39.0 30.0 39.0 13 35.12025080407856 37.0 34.0 39.0 30.0 39.0 14 36.06030646228244 38.0 35.0 40.0 30.0 41.0 15 36.36730479709848 38.0 35.0 40.0 30.0 41.0 16 36.53689922215379 38.0 35.0 40.0 31.0 41.0 17 36.479783412030386 38.0 35.0 40.0 31.0 41.0 18 36.40117703414768 38.0 35.0 40.0 31.0 41.0 19 36.31719929742923 37.0 35.0 40.0 31.0 41.0 20 36.18138301512352 37.0 34.0 40.0 31.0 41.0 21 36.04130967859668 37.0 34.0 40.0 30.0 41.0 22 35.91545712721549 37.0 34.0 40.0 30.0 41.0 23 35.877314149501586 37.0 34.0 40.0 30.0 41.0 24 35.79977987636579 37.0 34.0 40.0 30.0 41.0 25 35.67578982184813 36.0 34.0 40.0 30.0 41.0 26 35.52968190424052 36.0 34.0 40.0 29.0 41.0 27 35.437776865348205 36.0 34.0 40.0 29.0 41.0 28 35.44193355231643 36.0 34.0 40.0 29.0 41.0 29 35.458542051597895 36.0 34.0 40.0 29.0 41.0 30 35.394322977257694 36.0 34.0 40.0 29.0 41.0 31 35.225260042427976 36.0 34.0 40.0 29.0 41.0 32 35.06207258377244 36.0 34.0 40.0 27.0 41.0 33 34.842957184242344 36.0 33.0 40.0 27.0 41.0 34 34.686898081616825 36.0 34.0 40.0 26.0 41.0 35 34.53425716827483 36.0 33.0 40.0 25.0 41.0 36 34.33954184630124 36.0 33.0 40.0 24.0 41.0 37 34.2564354798239 36.0 33.0 40.0 24.0 41.0 38 34.25599637309245 35.0 33.0 40.0 24.0 41.0 39 34.19297942471316 36.0 33.0 40.0 24.0 41.0 40 34.057008029380235 35.0 33.0 40.0 23.0 41.0 41 34.03582939848081 35.0 33.0 40.0 23.0 41.0 42 33.99854695590684 35.0 33.0 40.0 23.0 41.0 43 33.94640559775542 35.0 33.0 40.0 23.0 41.0 44 33.82803496886334 35.0 33.0 40.0 23.0 41.0 45 33.74247017495837 35.0 33.0 40.0 23.0 41.0 46 33.69281632792719 35.0 33.0 39.0 23.0 41.0 47 33.61754545039805 35.0 33.0 39.0 23.0 41.0 48 33.57052282214467 35.0 32.0 39.0 23.0 41.0 49 33.5503792285408 35.0 32.0 39.0 23.0 41.0 50 33.4792547731472 35.0 32.0 39.0 23.0 41.0 51 33.31989495654554 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 0.0 12 1.0 13 2.0 14 14.0 15 63.0 16 178.0 17 485.0 18 1172.0 19 2259.0 20 3988.0 21 6013.0 22 8993.0 23 12989.0 24 18016.0 25 24716.0 26 31795.0 27 37011.0 28 41566.0 29 47997.0 30 56781.0 31 69190.0 32 85142.0 33 107917.0 34 171906.0 35 237158.0 36 132231.0 37 157380.0 38 206868.0 39 291550.0 40 175.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.44568762973608 24.337861265083603 28.84030201418828 15.376149090992039 2 30.983599078446133 26.19653732977486 28.983211295878096 13.836652295900912 3 27.75861675676909 25.596329752047264 32.07053080590342 14.57452268528023 4 25.45102534273136 28.590011177262255 30.73781336253108 15.221150117475307 5 22.322589475124886 33.0046305800771 30.430951892150826 14.241828052647188 6 20.962499144597277 41.24244394260818 27.015670977896395 10.77938593489815 7 87.48477383151987 4.116825201304774 6.804443532014873 1.5939574351604737 8 88.4559980838979 3.2603389675859393 6.497753142179338 1.7859098063368235 9 83.28417619015033 5.543066675790962 8.23804146992404 2.9347156641346746 10 48.61647163484569 27.635096603480918 13.402278792855677 10.34615296881772 11 41.63974999429732 21.945071739775084 22.245831337393646 14.169346928533955 12 38.58134309632975 21.172186865576315 25.645600948926756 14.60086908916718 13 21.606389288076826 37.52623235019047 25.66031387577271 15.20706448595999 14 16.679953922306623 39.58461643741874 27.882593124843176 15.852836515431465 15 14.852528570450968 23.13527908939529 45.68540568899838 16.326786651155363 16 17.322019206642487 19.7738885467278 43.63534752161318 19.268744725016536 17 17.726852802299323 19.48789890280344 29.356337963913408 33.42891033098383 18 20.961985902963114 23.138757727137936 34.78056068797189 21.11869568192705 19 28.19270512557312 23.755560117703414 26.59355824722279 21.458176509500674 20 30.250005702684824 23.728643445334065 25.948641620474923 20.072709231506195 21 23.25657519560209 28.399085289354225 27.87181505052579 20.472524464517893 22 23.558418303337213 24.418212094253974 25.08633864823559 26.937030954173224 23 20.158249503866422 29.978500878213467 24.99538082529255 24.867868792627572 24 19.914630808184494 23.469969661716735 38.28189511622072 18.333504413878053 25 18.387908027099158 26.16830903989598 34.94337233969753 20.50041059330733 26 18.301455325167087 32.39951869340085 27.886413923675267 21.412612057756792 27 18.527053536805127 33.41180227651178 27.855904559866783 20.205239626816304 28 16.977748123816696 28.359394602979084 35.89937042359543 18.763486849608796 29 17.369864732315975 24.06966399781017 35.424507858299684 23.13596341157417 30 18.967928100549738 30.60243162480896 30.885969114258994 19.54367116038231 31 27.422785647482833 27.866853714728894 25.279032368439065 19.43132826934921 32 29.576062410182715 25.815826090923604 26.241645566732817 18.36646593216086 33 28.33179360843085 27.50804078560186 24.96954766303976 19.190617942927528 34 21.527236022719496 26.7701133693743 27.45894066926709 24.24370993863911 35 21.306085905244192 26.251967426264283 29.854068295353454 22.587878373138075 36 29.96133579689318 26.08527794885832 24.933677775496704 19.019708478751795 37 22.13474303702183 32.57578868131116 27.675927826820867 17.61354045484614 38 22.551552270809097 32.023825817194734 24.20219439312028 21.222427518875886 39 21.35461575309656 32.07674673236159 26.142304797098475 20.426332717443373 40 25.11428180387326 26.20902620953945 25.050012545906615 23.62667944068067 41 18.575070143023336 25.77151622984101 27.3714614840667 28.281952143068956 42 21.398469399393235 26.650699149159422 24.828007025707706 27.12282442573964 43 21.70139601724492 26.429320924291154 26.575765870571864 25.29351718789206 44 20.906384725928966 29.02210360637788 28.23695795980748 21.834553707885675 45 18.510914938753164 35.78588699559753 24.00893040443441 21.6942676612149 46 21.65640183398344 32.75747621980428 25.911745249663543 19.674376696548734 47 21.521875498984922 28.041412897191996 26.603823079906018 23.83288852391706 48 22.485857341636443 25.112000729943656 30.01568238326604 22.38645954515386 49 21.102614110723326 24.608966901617283 32.11022149227856 22.178197495380825 50 20.376605305777957 32.810054973881705 26.598975797805608 20.21436392253473 51 19.230764844088597 32.52623235019047 24.765049385250578 23.477953420470357 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1516.0 1 1938.0 2 2360.0 3 8952.0 4 15544.0 5 11285.5 6 7027.0 7 7397.0 8 7767.0 9 8287.0 10 8807.0 11 8881.0 12 8955.0 13 8881.0 14 8807.0 15 8604.0 16 8401.0 17 8176.0 18 7951.0 19 7790.5 20 7630.0 21 7331.5 22 7033.0 23 7283.0 24 7533.0 25 8284.0 26 10407.5 27 11780.0 28 16016.0 29 20252.0 30 23577.0 31 26902.0 32 30635.0 33 34368.0 34 41280.5 35 48193.0 36 51742.0 37 55291.0 38 62850.5 39 70410.0 40 94182.0 41 117954.0 42 137724.0 43 157494.0 44 161991.0 45 166488.0 46 159271.0 47 152054.0 48 146662.5 49 141271.0 50 134355.5 51 127440.0 52 117052.5 53 106665.0 54 96144.5 55 85624.0 56 79534.0 57 73444.0 58 69459.0 59 65474.0 60 58712.5 61 51951.0 62 45704.5 63 39458.0 64 34225.5 65 28993.0 66 25105.5 67 21218.0 68 18705.0 69 16192.0 70 12874.5 71 9557.0 72 8312.5 73 7068.0 74 5625.5 75 3394.5 76 2606.0 77 2034.0 78 1462.0 79 1125.0 80 788.0 81 555.0 82 322.0 83 197.5 84 73.0 85 121.0 86 169.0 87 100.0 88 31.0 89 21.5 90 12.0 91 8.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1753560.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.288199956814907 #Duplication Level Percentage of deduplicated Percentage of total 1 79.20203013190951 15.276645941699499 2 6.9366838776439215 2.6759229133842033 3 2.6093260482632776 1.509876077142833 4 1.4246524130134282 1.0991592244464743 5 0.9450928181409891 0.9114569627026552 6 0.688636925714375 0.7969540032495094 7 0.5096503815346809 0.6881166926975553 8 0.4416422652983172 0.681478745796371 9 0.3588773730577176 0.6229888678362344 >10 4.144439464387986 18.843068923931444 >50 1.5227689401028024 21.427912621512192 >100 1.2141259572489806 34.47215518413397 >500 8.886015788494533E-4 0.09426738714134326 >1k 8.886015788494533E-4 0.36787133685036927 >5k 2.962005262831511E-4 0.5321251174754371 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9314 0.5311480645087707 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3706 0.21134149957800133 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014998061087159835 0.0 2 0.0 0.0 0.0 0.06911654006706357 0.0 3 0.0 0.0 0.0 0.10971965601405141 0.0 4 0.0 0.0 0.0 0.17433107507014303 0.0 5 0.0 0.0 0.0 0.3035539131823262 0.0 6 0.0 0.0 0.0 0.5054859828007026 0.0 7 0.0 0.0 0.0 0.6168023905654783 0.0 8 0.0 0.0 0.0 0.9155090216473916 0.0 9 0.0 0.0 0.0 1.0672004379661946 0.0 10 0.0 0.0 0.0 1.3074545496019525 0.0 11 0.0 0.0 0.0 1.486803987317229 0.0 12 5.7026848240151464E-5 0.0 0.0 1.6502999612217433 0.0 13 5.7026848240151464E-5 0.0 0.0 1.723978649148019 0.0 14 5.7026848240151464E-5 0.0 0.0 1.7557996304660235 0.0 15 5.7026848240151464E-5 0.0 0.0 1.7946919409658066 0.0 16 5.7026848240151464E-5 0.0 0.0 1.8752708775291407 0.0 17 5.7026848240151464E-5 0.0 0.0 1.9704486872419535 0.0 18 5.7026848240151464E-5 0.0 0.0 2.1205433518100323 0.0 19 5.7026848240151464E-5 0.0 0.0 2.1836150459636396 0.0 20 5.7026848240151464E-5 0.0 0.0 2.2607723716325645 0.0 21 5.7026848240151464E-5 0.0 0.0 2.349049932708319 0.0 22 5.7026848240151464E-5 0.0 0.0 2.447706380163781 0.0 23 5.7026848240151464E-5 0.0 0.0 2.562900613608887 0.0 24 5.7026848240151464E-5 0.0 0.0 2.648041698031433 0.0 25 5.7026848240151464E-5 0.0 0.0 2.7162458085266543 0.0 26 5.7026848240151464E-5 0.0 0.0 2.787757476219804 0.0 27 5.7026848240151464E-5 0.0 0.0 2.860295627181277 0.0 28 5.7026848240151464E-5 0.0 0.0 2.935228905768836 0.0 29 5.7026848240151464E-5 0.0 0.0 3.024475923264673 0.0 30 5.7026848240151464E-5 0.0 0.0 3.15501037888638 0.0 31 5.7026848240151464E-5 0.0 0.0 3.2547503364584047 0.0 32 5.7026848240151464E-5 0.0 0.0 3.3470197769109697 0.0 33 5.7026848240151464E-5 0.0 0.0 3.4431670430438652 0.0 34 1.1405369648030293E-4 0.0 0.0 3.5494650881635073 0.0 35 1.1405369648030293E-4 0.0 0.0 3.6793722484545723 0.0 36 1.1405369648030293E-4 0.0 0.0 3.786468669449577 0.0 37 1.1405369648030293E-4 0.0 0.0 3.895275895891786 0.0 38 1.1405369648030293E-4 0.0 0.0 4.003569880699834 0.0 39 1.1405369648030293E-4 0.0 0.0 4.120189785350943 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGA 20 7.034301E-4 45.000004 34 ATTACGC 20 7.034301E-4 45.000004 11 GTCGTAC 30 2.166158E-6 45.000004 19 AGTACGC 20 7.034301E-4 45.000004 21 TCGCGAC 20 7.034301E-4 45.000004 29 ACGCGCC 20 7.034301E-4 45.000004 35 AACCGTA 25 3.891648E-5 45.0 12 ATCGTAG 35 1.212411E-7 45.0 1 TACAACG 45 3.8562575E-10 45.0 1 TACCGGA 25 3.891648E-5 45.0 14 AATCGTG 100 0.0 42.75 1 CGCATCG 85 0.0 42.35294 21 CGTTTTT 6905 0.0 41.80666 1 TATTACG 55 6.184564E-11 40.909092 1 TAACGGG 525 0.0 40.714283 3 TATAGCG 155 0.0 40.64516 1 CTAACGG 50 1.0822987E-9 40.5 2 GGACGTA 50 1.0822987E-9 40.5 8 CGACGGT 295 0.0 40.42373 28 CACGACG 295 0.0 40.42373 26 >>END_MODULE