##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545500_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2578550 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09952958057823 31.0 31.0 33.0 30.0 34.0 2 31.37852320102383 31.0 31.0 34.0 30.0 34.0 3 31.484262085280488 31.0 31.0 34.0 30.0 34.0 4 35.25044191502977 37.0 35.0 37.0 33.0 37.0 5 35.1193713521165 37.0 35.0 37.0 32.0 37.0 6 35.169178026410194 37.0 35.0 37.0 32.0 37.0 7 35.759381435302785 37.0 35.0 37.0 35.0 37.0 8 35.756283182408716 37.0 35.0 37.0 35.0 37.0 9 37.42851176048554 39.0 37.0 39.0 35.0 39.0 10 36.653119776618645 39.0 35.0 39.0 32.0 39.0 11 36.29437435768164 38.0 35.0 39.0 32.0 39.0 12 35.302684842256305 37.0 35.0 39.0 30.0 39.0 13 34.84911442477361 37.0 33.0 39.0 27.0 39.0 14 35.76415272149076 38.0 34.0 40.0 27.0 41.0 15 36.13917395435419 38.0 34.0 40.0 30.0 41.0 16 36.32709080684881 38.0 35.0 40.0 31.0 41.0 17 36.26542242733319 37.0 35.0 40.0 31.0 41.0 18 36.20881541951872 37.0 35.0 40.0 31.0 41.0 19 36.13507669038801 37.0 35.0 40.0 30.0 41.0 20 36.00428574198678 37.0 34.0 40.0 30.0 41.0 21 35.836533322991606 36.0 34.0 40.0 30.0 41.0 22 35.73057377208121 36.0 34.0 40.0 30.0 41.0 23 35.69666168970933 36.0 34.0 40.0 30.0 41.0 24 35.602344728626555 36.0 34.0 40.0 30.0 41.0 25 35.49395823233988 36.0 34.0 40.0 29.0 41.0 26 35.316909503403075 36.0 34.0 40.0 29.0 41.0 27 35.21766186422602 36.0 34.0 40.0 29.0 41.0 28 35.2443815322565 36.0 34.0 40.0 29.0 41.0 29 35.26277442748832 36.0 34.0 40.0 29.0 41.0 30 35.20599018828411 36.0 34.0 40.0 29.0 41.0 31 35.03570572608637 36.0 34.0 40.0 29.0 41.0 32 34.87758895503287 35.0 34.0 40.0 27.0 41.0 33 34.67885206802273 35.0 33.0 40.0 27.0 41.0 34 34.547438676775705 35.0 33.0 40.0 26.0 41.0 35 34.38953132574509 35.0 33.0 40.0 25.0 41.0 36 34.22441953811251 35.0 33.0 40.0 24.0 41.0 37 34.122252040875686 35.0 33.0 40.0 24.0 41.0 38 34.107257955052255 35.0 33.0 40.0 24.0 41.0 39 34.04408020011247 35.0 33.0 40.0 24.0 41.0 40 33.87364836826899 35.0 33.0 40.0 23.0 41.0 41 33.86552713734463 35.0 33.0 39.0 23.0 41.0 42 33.839151848907335 35.0 33.0 39.0 23.0 41.0 43 33.751422698803594 35.0 33.0 39.0 23.0 41.0 44 33.642921021504335 35.0 33.0 39.0 23.0 41.0 45 33.55999883655543 35.0 32.0 39.0 23.0 41.0 46 33.512531461480286 35.0 32.0 39.0 23.0 41.0 47 33.43943805627194 35.0 32.0 39.0 23.0 41.0 48 33.400800837680094 35.0 32.0 39.0 23.0 41.0 49 33.389009714762174 35.0 32.0 39.0 23.0 41.0 50 33.29854104050726 35.0 32.0 39.0 23.0 40.0 51 33.126685152508195 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 4.0 13 6.0 14 26.0 15 93.0 16 265.0 17 794.0 18 1835.0 19 3410.0 20 5822.0 21 9026.0 22 13571.0 23 19461.0 24 26755.0 25 36320.0 26 46819.0 27 55425.0 28 63651.0 29 73730.0 30 87214.0 31 105295.0 32 129360.0 33 165627.0 34 272371.0 35 376231.0 36 186468.0 37 215982.0 38 286444.0 39 396277.0 40 263.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.978088460568927 24.764848461344556 28.80254406546315 14.454519012623374 2 30.53902387000446 26.425588024277207 29.79829749277695 13.237090612941383 3 29.330864245409245 26.224583583797095 31.147195129045397 13.29735704174827 4 25.32667584495162 28.456458086909308 30.794516297919373 15.422349770219698 5 22.60382773264044 32.83969672878168 30.033468422175254 14.523007116402628 6 21.46880999011072 41.118070233270636 26.96403017199589 10.449089604622754 7 87.71600318008183 4.51269124120145 6.187586046421439 1.5837195322952822 8 88.87204048787109 3.4780012022260576 5.897616877702585 1.7523414322002675 9 83.8674061003277 5.240038005856004 7.920265265362316 2.972290628453976 10 51.803959589691885 23.74190921254193 13.029415756917647 11.424715440848539 11 47.87105155998526 20.316456923464738 18.699501657908517 13.112989858641486 12 42.47371584805414 20.449399856508503 22.704000310251885 14.372883985185473 13 22.135541292586918 39.576893990808784 23.231040701169263 15.05652401543503 14 17.048806499777005 41.683775765449575 26.448973260165598 14.818444474607823 15 15.183882414535303 22.12309243567121 47.38213336952939 15.310891780264102 16 17.29972271237711 17.585503480638344 45.74997576157143 19.36479804541312 17 17.61978631401369 17.60396346784045 28.734172306141048 36.042077912004814 18 21.66605262647612 22.10672664869791 34.90601306936069 21.32120765546528 19 30.70908068488104 22.91260592193287 25.185045859106864 21.19326753407923 20 32.075740241608656 22.80192356169165 24.54538403366233 20.576952163037365 21 23.75412538054333 27.121483004013886 27.815322565007467 21.309069050435323 22 23.91681371313335 24.22027883888232 23.630994163386397 28.23191328459793 23 20.452347249423124 29.717244187624832 24.587539508638574 25.24286905431347 24 21.050163851777164 22.550348063834324 38.366019662213255 18.033468422175254 25 19.118574392584982 23.665238215276027 35.166779779333346 22.049407612805645 26 17.75265168408602 32.98632952628415 27.115355529270325 22.145663260359505 27 19.2257276376258 33.30076981249152 27.476876539140214 19.99662601074247 28 16.368656803242132 28.721801012196778 36.84419538112505 18.06534680343604 29 17.57433441275135 24.58556165286692 34.76957980260224 23.07052413177949 30 19.62032925481375 30.182428108820847 30.255220957514883 19.942021678850516 31 29.407186209303678 26.609451048069648 24.41798685307634 19.565375889550328 32 32.37032440712804 24.636287836187005 26.011750790172773 16.981636966512188 33 29.488472203370108 25.590622636753213 23.928835973706153 20.99206918617052 34 20.730410502026334 26.793081382947783 27.439297279478776 25.037210835547107 35 21.474976246339995 25.271179538888134 30.04514164937659 23.20870256539528 36 31.867677570727736 24.86959725427081 23.98522425394117 19.277500921060287 37 21.702584786023152 33.0966628531539 26.919004867076456 18.281747493746487 38 22.795408272090903 32.41310038587578 22.343216148610654 22.44827519342266 39 22.533710806460995 30.932306916677977 25.45341374028039 21.08056853658064 40 24.825076108665723 24.938162921021505 25.266021601287548 24.970739369025228 41 17.94915747222276 24.37955440072909 27.355606833297784 30.315681293750362 42 21.936359581935584 25.620057784413717 24.080549145837775 28.363033487812917 43 22.352562486668866 24.822865563979757 26.423842857419867 26.400729091931513 44 20.7827655077466 28.37699482267166 28.326229857865854 22.514009811715887 45 18.69725233173683 35.878071008900356 23.362858971127185 22.061817688235635 46 22.340152411238876 31.767311085687695 25.17500145430571 20.71753504876772 47 22.41984836439084 26.22268329099688 26.682670493106592 24.67479785150569 48 23.331639875123617 24.233697232940994 30.291210176261853 22.143452715673536 49 22.50908456302961 24.50237536600027 30.552713734463165 22.43582633650695 50 20.74949099299994 32.800760117120085 25.90684687130364 20.54290201857633 51 19.593957844525022 32.83659420992418 24.034360396346784 23.535087549204007 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1882.0 1 2975.5 2 4069.0 3 11479.0 4 18889.0 5 13963.5 6 9038.0 7 9484.5 8 9931.0 9 10653.5 10 11376.0 11 11480.0 12 11584.0 13 11687.5 14 11791.0 15 11639.0 16 11487.0 17 10358.0 18 9229.0 19 8635.0 20 8041.0 21 9108.0 22 10175.0 23 9829.5 24 9484.0 25 10537.5 26 14277.5 27 16964.0 28 20060.0 29 23156.0 30 27257.5 31 31359.0 32 37375.0 33 43391.0 34 46701.5 35 50012.0 36 58931.0 37 67850.0 38 81868.5 39 95887.0 40 134510.0 41 173133.0 42 208602.5 43 244072.0 44 243399.0 45 242726.0 46 234619.5 47 226513.0 48 214426.5 49 202340.0 50 195069.5 51 187799.0 52 171272.0 53 154745.0 54 141556.5 55 128368.0 56 120422.0 57 112476.0 58 109549.5 59 106623.0 60 98513.0 61 90403.0 62 78495.0 63 66587.0 64 60163.0 65 53739.0 66 45956.0 67 38173.0 68 32788.5 69 27404.0 70 24373.0 71 21342.0 72 17367.5 73 13393.0 74 11887.0 75 7369.5 76 4358.0 77 4038.0 78 3718.0 79 2679.0 80 1640.0 81 1175.0 82 710.0 83 629.0 84 548.0 85 332.5 86 117.0 87 76.0 88 35.0 89 25.5 90 16.0 91 9.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2578550.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.281585358382472 #Duplication Level Percentage of deduplicated Percentage of total 1 81.37144177206159 12.434846331744083 2 7.276279191572238 2.2238616311486674 3 2.42019288220492 1.1095315233949252 4 1.2847023232806727 0.785291528533035 5 0.7686840395239158 0.5873355381805483 6 0.5054777042914422 0.46347004109333334 7 0.3505168322133277 0.3749517023712456 8 0.2685438730257933 0.32830208944914274 9 0.21336404715943197 0.29344868091691223 >10 2.3479947457687786 8.701408768186564 >50 1.178866598206885 13.184764199711067 >100 1.9938778788353004 56.72559225261327 >500 0.017773010505070283 1.6849662172139674 >1k 0.001777301050507028 0.379541288525273 >5k 2.539001500724326E-4 0.293366559245511 >10k+ 2.539001500724326E-4 0.42932164767247455 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11065 0.4291171394776134 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7561 0.2932268135192259 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.8781485718717885E-5 0.0 0.0 0.019507087316515095 0.0 2 3.8781485718717885E-5 0.0 0.0 0.0713191522367222 0.0 3 3.8781485718717885E-5 0.0 0.0 0.10381803726900778 0.0 4 3.8781485718717885E-5 0.0 0.0 0.179946093734851 0.0 5 3.8781485718717885E-5 0.0 0.0 0.30734327432083924 0.0 6 7.756297143743577E-5 0.0 0.0 0.48934478679878224 0.0 7 7.756297143743577E-5 0.0 0.0 0.5846696786953908 0.0 8 7.756297143743577E-5 0.0 0.0 0.8599018828411317 0.0 9 1.1634445715615365E-4 0.0 0.0 0.9857865854840899 0.0 10 1.1634445715615365E-4 0.0 0.0 1.1968354307653526 0.0 11 1.1634445715615365E-4 0.0 0.0 1.3670085900990867 0.0 12 1.1634445715615365E-4 0.0 0.0 1.5248492369742686 0.0 13 1.5512594287487154E-4 0.0 0.0 1.5874425549242792 0.0 14 1.5512594287487154E-4 0.0 0.0 1.6114482945841655 0.0 15 1.5512594287487154E-4 0.0 0.0 1.6437144907021388 0.0 16 1.5512594287487154E-4 0.0 0.0 1.7174768765391402 0.0 17 1.939074285935894E-4 0.0 0.0 1.802990052548913 0.0 18 1.939074285935894E-4 0.0 0.0 1.9453568866223265 0.0 19 1.939074285935894E-4 0.0 0.0 1.9942991215993484 0.0 20 1.939074285935894E-4 0.0 0.0 2.0561168098349847 0.0 21 1.939074285935894E-4 0.0 0.0 2.1333307479009522 0.0 22 1.939074285935894E-4 0.0 0.0 2.2067828818522037 0.0 23 1.939074285935894E-4 0.0 0.0 2.2975315584340037 0.0 24 1.939074285935894E-4 0.0 0.0 2.3658645362703847 0.0 25 1.939074285935894E-4 0.0 0.0 2.420507649648058 0.0 26 1.939074285935894E-4 0.0 0.0 2.4754997963972 0.0 27 1.939074285935894E-4 0.0 0.0 2.5276608946888754 0.0 28 1.939074285935894E-4 0.0 0.0 2.5845921157239533 0.0 29 1.939074285935894E-4 0.0 0.0 2.6473793411025577 0.0 30 2.326889143123073E-4 0.0 0.0 2.739601714141669 0.0 31 2.326889143123073E-4 0.0 0.0 2.823563630722693 0.0 32 2.714704000310252E-4 0.0 0.0 2.8956584126737894 0.0 33 2.714704000310252E-4 0.0 0.0 2.9727947877683194 0.0 34 2.714704000310252E-4 0.0 0.0 3.0541195633204707 0.0 35 2.714704000310252E-4 0.0 0.0 3.1592173896181963 0.0 36 2.714704000310252E-4 0.0 0.0 3.2456613212852186 0.0 37 2.714704000310252E-4 0.0 0.0 3.335789494095519 0.0 38 2.714704000310252E-4 0.0 0.0 3.4161059510189835 0.0 39 2.714704000310252E-4 0.0 0.0 3.501851815943069 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTA 25 3.8921607E-5 45.0 22 GTCGACC 20 7.034921E-4 45.0 11 TAGAACG 110 0.0 45.0 1 CCGTACA 25 3.8921607E-5 45.0 43 CTACGTC 40 6.8212103E-9 45.0 43 CGTACAC 20 7.034921E-4 45.0 15 TCGTAGC 40 6.8212103E-9 45.0 18 TCGACCA 35 1.2127202E-7 45.0 38 TATCGTG 50 2.1827873E-11 45.0 1 TAGCTAC 20 7.034921E-4 45.0 27 CAATACG 25 3.8921607E-5 45.0 1 AGTCGAT 70 0.0 45.0 10 GTACGAT 25 3.8921607E-5 45.0 13 AAATGCG 75 0.0 45.0 1 AAGTCGA 45 3.8562575E-10 45.0 17 TCTAGCG 100 0.0 42.75 1 TCACGAC 190 0.0 42.63158 25 TTCTACG 75 0.0 42.0 1 TAGTCCG 65 0.0 41.53846 1 ACGTTAG 60 3.6379788E-12 41.249996 1 >>END_MODULE