SRR1545499_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545499_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1096030
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3812	0.3478006988859794	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2733	0.24935448847203087	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAAATG	20	7.033142E-4	45.000004	15
CACGCTT	20	7.033142E-4	45.000004	31
TAACGTG	20	7.033142E-4	45.000004	1
ACGGATC	20	7.033142E-4	45.000004	5
ACAATCG	20	7.033142E-4	45.000004	42
ACTAACG	20	7.033142E-4	45.000004	1
CATGTCC	20	7.033142E-4	45.000004	27
ATGCGAA	20	7.033142E-4	45.000004	11
ACGTACG	20	7.033142E-4	45.000004	1
TATACGA	20	7.033142E-4	45.000004	15
TTCGCGA	20	7.033142E-4	45.000004	15
TCGACAG	40	6.8139343E-9	45.000004	1
TCGCGAA	20	7.033142E-4	45.000004	16
GTACGTA	20	7.033142E-4	45.000004	1
TACGTAC	20	7.033142E-4	45.000004	44
ATAGGCG	35	1.2118653E-7	45.0	12
ACGTTAG	55	1.8189894E-12	45.0	1
TATCTAC	50	2.1827873E-11	45.0	39
GCGATAC	85	0.0	45.0	9
GCGTAAG	100	0.0	45.0	1