##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545499_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1096030 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.022727480087223 31.0 31.0 33.0 30.0 34.0 2 31.300769139530853 31.0 31.0 34.0 28.0 34.0 3 31.4139083784203 31.0 31.0 34.0 28.0 34.0 4 35.19335967081193 37.0 35.0 37.0 32.0 37.0 5 35.046268806510774 37.0 35.0 37.0 32.0 37.0 6 35.10076548999571 37.0 35.0 37.0 32.0 37.0 7 35.71432168827496 37.0 35.0 37.0 35.0 37.0 8 35.7085143654827 37.0 35.0 37.0 35.0 37.0 9 37.37049533315694 39.0 37.0 39.0 35.0 39.0 10 36.59018366285594 39.0 35.0 39.0 32.0 39.0 11 36.21328613267885 38.0 35.0 39.0 31.0 39.0 12 35.28433072087443 37.0 35.0 39.0 30.0 39.0 13 34.83509666706203 37.0 33.0 39.0 27.0 39.0 14 35.72758866089432 38.0 34.0 40.0 27.0 41.0 15 36.102488982965795 38.0 34.0 40.0 30.0 41.0 16 36.296448089924546 38.0 35.0 40.0 31.0 41.0 17 36.242218734888645 37.0 34.0 40.0 31.0 41.0 18 36.18119485780499 37.0 35.0 40.0 31.0 41.0 19 36.131224510278 37.0 35.0 40.0 30.0 41.0 20 36.00488216563415 37.0 34.0 40.0 30.0 41.0 21 35.83659662600476 37.0 34.0 40.0 30.0 41.0 22 35.71322226581389 36.0 34.0 40.0 30.0 41.0 23 35.67315675665812 36.0 34.0 40.0 30.0 41.0 24 35.57228178060819 36.0 34.0 40.0 29.0 41.0 25 35.46692700017335 36.0 34.0 40.0 29.0 41.0 26 35.31350236763592 36.0 34.0 40.0 29.0 41.0 27 35.189350656460135 36.0 34.0 40.0 29.0 41.0 28 35.211960439039075 36.0 34.0 40.0 29.0 41.0 29 35.22925741083729 36.0 34.0 40.0 29.0 41.0 30 35.17603623988394 36.0 34.0 40.0 29.0 41.0 31 35.02824192768446 36.0 34.0 40.0 28.0 41.0 32 34.87490214683905 36.0 34.0 40.0 27.0 41.0 33 34.68368657792214 36.0 33.0 40.0 26.0 41.0 34 34.565583971241665 36.0 33.0 40.0 25.0 41.0 35 34.442620183754094 35.0 33.0 40.0 25.0 41.0 36 34.21801775498846 35.0 33.0 40.0 24.0 41.0 37 34.140858370665036 35.0 33.0 40.0 24.0 41.0 38 34.12805488900851 35.0 33.0 40.0 24.0 41.0 39 34.08020948331706 35.0 33.0 40.0 24.0 41.0 40 33.9110517047891 35.0 33.0 40.0 23.0 41.0 41 33.87286570623067 35.0 33.0 40.0 23.0 41.0 42 33.82719359871536 35.0 33.0 40.0 23.0 41.0 43 33.74772770818317 35.0 33.0 39.0 23.0 41.0 44 33.64460279371915 35.0 33.0 39.0 23.0 41.0 45 33.572522649927464 35.0 32.0 39.0 23.0 41.0 46 33.51982883680191 35.0 32.0 39.0 23.0 41.0 47 33.45468554692846 35.0 32.0 39.0 23.0 41.0 48 33.402905029971805 35.0 32.0 39.0 23.0 41.0 49 33.385792359698186 35.0 32.0 39.0 23.0 41.0 50 33.34035564719944 35.0 32.0 39.0 23.0 41.0 51 33.13896243715957 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 4.0 14 18.0 15 46.0 16 155.0 17 362.0 18 868.0 19 1643.0 20 2759.0 21 4183.0 22 6056.0 23 8592.0 24 11825.0 25 15779.0 26 20231.0 27 23482.0 28 27157.0 29 31452.0 30 37401.0 31 45098.0 32 54779.0 33 69668.0 34 112289.0 35 155412.0 36 80170.0 37 94639.0 38 122281.0 39 169558.0 40 120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.29388794102351 24.76182221289563 28.03499904199703 13.90929080408383 2 29.669625831409725 26.65091283997701 30.012225942720544 13.667235385892724 3 28.75769823818691 26.04919573369342 31.325146209501565 13.867959818618104 4 25.895824019415524 28.61171683256845 30.325721011286188 15.166738136729835 5 22.60585932866801 33.29917976697718 29.57090590586024 14.524054998494568 6 21.282994078629237 41.63891499320274 26.710856454659087 10.367234473508937 7 87.7785279600011 4.6708575495196305 5.91735627674425 1.6332582137350253 8 88.78251507714204 3.5553771338375775 5.633513681194858 2.0285941078255156 9 84.00509110152095 5.639535414176619 7.51941096502833 2.8359625192741076 10 50.2119467532823 26.64616844429441 12.122478399313888 11.019406403109404 11 45.60112405682326 21.24695491911718 19.695720007664026 13.456201016395536 12 42.21709259783035 20.76512504219775 23.09781666560222 13.91996569436968 13 23.167431548406523 38.849301570212496 22.74718757698238 15.236079304398602 14 16.655292282145563 41.88617099896901 25.500031933432478 15.958504785452954 15 15.531235458883424 23.71048237730719 44.99776465972647 15.76051750408292 16 16.87727525706413 18.99263706285412 44.978695838617554 19.151391841464193 17 17.249710318148225 18.79975913068073 28.322126219172834 35.62840433199821 18 20.918131802961597 22.945083619973904 33.70227092324115 22.434513653823345 19 29.595266552922823 24.185743090973787 24.67204364844028 21.54694670766311 20 32.39199656943697 22.97619590704634 23.798162459056776 20.833645064459912 21 22.97555723839676 28.780872786328842 26.73284490388037 21.51072507139403 22 23.824804065582146 25.161537549154676 23.344434002718902 27.66922438254427 23 20.265138727954525 30.83209401202522 23.96859575011633 24.934171509903926 24 20.33593970967948 24.31521035008166 37.829986405481606 17.51886353475726 25 18.422579673914036 24.86537777250623 35.03489867978066 21.677143873799075 26 18.171035464357725 33.075645739623916 26.871436000839395 21.881882795178964 27 18.99336696988221 34.1059095097762 26.14298878680328 20.757734733538317 28 17.171883981277887 29.143727817669223 35.11765188909063 18.566736311962266 29 17.576708666733577 23.790407196883297 35.49300657828709 23.139877558096035 30 19.200204373967868 31.12998731786539 29.516710309024386 20.153097999142357 31 28.994918022316906 26.897530177093692 24.037115772378492 20.070436028210906 32 31.03163234582995 25.455690081475872 25.037909546271543 18.474768026422634 33 29.036796438053702 26.640511664826693 23.873799074842843 20.44889282227676 34 20.707736102113994 26.610859191810444 26.964407908542647 25.716996797532914 35 21.233634115854493 25.007070974334646 30.094522960137954 23.66477194967291 36 30.523799531034733 25.699935220751257 24.166218077972317 19.61004717024169 37 22.04547320785015 32.5654407269874 26.192257511199514 19.196828553962938 38 21.528699031960805 33.319617163763766 23.66586681021505 21.48581699406038 39 21.365929764696222 32.17548789722909 25.634608541737 20.82397379633769 40 25.145479594536646 26.444166674269866 24.74439568259993 23.66595804859356 41 18.304334735363085 24.543032581224967 26.76167623149001 30.390956451921937 42 21.208178608249774 26.227019333412404 23.69442442268916 28.87037763564866 43 21.724770307382098 26.396540240686843 25.730317600795598 26.14837185113546 44 20.340592866983567 29.21452879939418 28.241562730947145 22.203315602675108 45 18.646843608295395 35.404961543023454 23.017526892512066 22.93066795616908 46 20.882913788856143 33.545249673822795 24.640292692718265 20.931543844602793 47 21.590558652591625 27.2993439960585 26.384861728237365 24.725235623112507 48 23.399359506582847 23.463773801811993 30.210304462469097 22.926562229136064 49 21.13308942273478 24.549692982856307 31.866919701103075 22.45029789330584 50 20.069249929290255 32.55951023238415 25.968176053575178 21.40306378475042 51 18.726768427871498 33.89514885541454 23.957373429559407 23.420709287154548 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 953.0 1 1317.5 2 1682.0 3 4195.0 4 6708.0 5 5056.5 6 3405.0 7 3701.5 8 3998.0 9 4293.0 10 4588.0 11 4748.5 12 4909.0 13 4875.0 14 4841.0 15 4764.0 16 4687.0 17 4304.5 18 3922.0 19 3951.0 20 3980.0 21 3865.0 22 3750.0 23 4112.5 24 4475.0 25 4971.0 26 5882.0 27 6297.0 28 7826.5 29 9356.0 30 12138.5 31 14921.0 32 17238.0 33 19555.0 34 22182.0 35 24809.0 36 27485.0 37 30161.0 38 35972.5 39 41784.0 40 56348.5 41 70913.0 42 90058.5 43 109204.0 44 111695.5 45 114187.0 46 106352.0 47 98517.0 48 91546.5 49 84576.0 50 80083.0 51 75590.0 52 69158.5 53 62727.0 54 58158.5 55 53590.0 56 49974.0 57 46358.0 58 43478.5 59 40599.0 60 39391.5 61 38184.0 62 33808.5 63 29433.0 64 25563.0 65 21693.0 66 18004.5 67 14316.0 68 12403.5 69 10491.0 70 9038.5 71 7586.0 72 6608.0 73 5630.0 74 4543.5 75 3026.0 76 2595.0 77 1899.0 78 1203.0 79 894.0 80 585.0 81 406.0 82 227.0 83 157.0 84 87.0 85 51.5 86 16.0 87 15.0 88 14.0 89 8.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1096030.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.435003769993273 #Duplication Level Percentage of deduplicated Percentage of total 1 78.86168760806089 15.326771959706953 2 6.520346301894933 2.534459099179794 3 2.5053292612046354 1.4607325090975964 4 1.3445267677154173 1.0452353119762403 5 0.8787625667811741 0.8539376899160542 6 0.6462598126624702 0.7536037137294154 7 0.4819719925960389 0.655698924519463 8 0.37766434156076567 0.5871926321620407 9 0.33320323865261803 0.5828225579448839 >10 5.032691316831151 24.654931059384168 >50 2.25152905100501 31.320576727415624 >100 0.7636765202214154 19.428196533689697 >500 0.0014107324880937478 0.19768083272903417 >1k 9.404883253958319E-4 0.5981604485490192 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3812 0.3478006988859794 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2733 0.24935448847203087 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01751776867421512 0.0 2 0.0 0.0 0.0 0.05437807359287611 0.0 3 0.0 0.0 0.0 0.0858553141793564 0.0 4 0.0 0.0 0.0 0.16140069158690912 0.0 5 0.0 0.0 0.0 0.2700656003941498 0.0 6 0.0 0.0 0.0 0.45655684607173164 0.0 7 0.0 0.0 0.0 0.5602948824393493 0.0 8 0.0 0.0 0.0 0.8949572548196674 0.0 9 0.0 0.0 0.0 1.0500624982892803 0.0 10 0.0 0.0 0.0 1.2942163991861537 0.0 11 0.0 0.0 0.0 1.4620037772688703 0.0 12 0.0 0.0 0.0 1.6276014342673102 0.0 13 0.0 0.0 0.0 1.6961214565294747 0.0 14 0.0 0.0 0.0 1.7227630630548434 0.0 15 0.0 0.0 0.0 1.7536928733702544 0.0 16 0.0 0.0 0.0 1.8234902329315803 0.0 17 0.0 0.0 0.0 1.9064259189985675 0.0 18 0.0 0.0 0.0 2.038904044597319 0.0 19 0.0 0.0 0.0 2.0919135425125224 0.0 20 0.0 0.0 0.0 2.1542293550359024 0.0 21 0.0 0.0 0.0 2.2247566216253203 0.0 22 0.0 0.0 0.0 2.3037690574163117 0.0 23 0.0 0.0 0.0 2.3990219245823563 0.0 24 0.0 0.0 0.0 2.475114732260978 0.0 25 0.0 0.0 0.0 2.537430544784358 0.0 26 0.0 0.0 0.0 2.5954581535176957 0.0 27 0.0 0.0 0.0 2.6534857622510333 0.0 28 0.0 0.0 0.0 2.7170789120735748 0.0 29 0.0 0.0 0.0 2.786602556499366 0.0 30 0.0 0.0 0.0 2.8836801912356416 0.0 31 0.0 0.0 0.0 2.969900458929044 0.0 32 0.0 0.0 0.0 3.0464494585002235 0.0 33 9.123837851153709E-5 0.0 0.0 3.1286552375391183 0.0 34 1.8247675702307418E-4 0.0 0.0 3.2110434933350365 0.0 35 1.8247675702307418E-4 0.0 0.0 3.316971250786931 0.0 36 1.8247675702307418E-4 0.0 0.0 3.4077534374059106 0.0 37 1.8247675702307418E-4 0.0 0.0 3.489867978066294 0.0 38 1.8247675702307418E-4 0.0 0.0 3.5825661706340153 0.0 39 1.8247675702307418E-4 0.0 0.0 3.6758117934728065 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAATG 20 7.033142E-4 45.000004 15 CACGCTT 20 7.033142E-4 45.000004 31 TAACGTG 20 7.033142E-4 45.000004 1 ACGGATC 20 7.033142E-4 45.000004 5 ACAATCG 20 7.033142E-4 45.000004 42 ACTAACG 20 7.033142E-4 45.000004 1 CATGTCC 20 7.033142E-4 45.000004 27 ATGCGAA 20 7.033142E-4 45.000004 11 ACGTACG 20 7.033142E-4 45.000004 1 TATACGA 20 7.033142E-4 45.000004 15 TTCGCGA 20 7.033142E-4 45.000004 15 TCGACAG 40 6.8139343E-9 45.000004 1 TCGCGAA 20 7.033142E-4 45.000004 16 GTACGTA 20 7.033142E-4 45.000004 1 TACGTAC 20 7.033142E-4 45.000004 44 ATAGGCG 35 1.2118653E-7 45.0 12 ACGTTAG 55 1.8189894E-12 45.0 1 TATCTAC 50 2.1827873E-11 45.0 39 GCGATAC 85 0.0 45.0 9 GCGTAAG 100 0.0 45.0 1 >>END_MODULE