##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545497_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2948529 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.018388491346023 31.0 31.0 33.0 28.0 34.0 2 31.299269567977795 31.0 31.0 34.0 28.0 34.0 3 31.412983898072564 31.0 31.0 34.0 28.0 34.0 4 35.17464335605992 37.0 35.0 37.0 32.0 37.0 5 35.027476412814664 37.0 35.0 37.0 32.0 37.0 6 35.06967711696239 37.0 35.0 37.0 32.0 37.0 7 35.722604729341306 37.0 35.0 37.0 35.0 37.0 8 35.72995890493192 37.0 35.0 37.0 35.0 37.0 9 37.4219575252609 39.0 37.0 39.0 35.0 39.0 10 36.54919453056083 39.0 35.0 39.0 32.0 39.0 11 36.19179088962666 38.0 35.0 39.0 31.0 39.0 12 35.170115335477455 37.0 34.0 39.0 30.0 39.0 13 34.68215405037563 37.0 33.0 39.0 27.0 39.0 14 35.558381145310086 37.0 33.0 40.0 27.0 41.0 15 35.97664191194999 37.0 34.0 40.0 30.0 41.0 16 36.18561357205576 37.0 34.0 40.0 31.0 41.0 17 36.14367333677234 37.0 34.0 40.0 31.0 41.0 18 36.06856673276742 37.0 34.0 40.0 30.0 41.0 19 35.992670921669756 37.0 34.0 40.0 30.0 41.0 20 35.84972608375227 36.0 34.0 40.0 30.0 41.0 21 35.68095175594339 36.0 34.0 40.0 30.0 41.0 22 35.549184695147986 36.0 34.0 40.0 30.0 41.0 23 35.528037879227234 36.0 34.0 40.0 30.0 41.0 24 35.456637530104 36.0 34.0 40.0 29.0 41.0 25 35.35451474277512 35.0 34.0 40.0 29.0 41.0 26 35.1999993895261 35.0 34.0 40.0 29.0 41.0 27 35.11144913277095 35.0 34.0 40.0 29.0 41.0 28 35.12977996824858 36.0 34.0 40.0 29.0 41.0 29 35.18163497798394 36.0 34.0 40.0 29.0 41.0 30 35.10925956638039 36.0 34.0 40.0 29.0 41.0 31 34.93835129313634 36.0 34.0 40.0 28.0 41.0 32 34.75983481932855 35.0 34.0 40.0 27.0 41.0 33 34.545470978918644 35.0 33.0 40.0 26.0 41.0 34 34.3981483648287 35.0 33.0 40.0 25.0 41.0 35 34.24222112110819 35.0 33.0 40.0 24.0 41.0 36 34.039443057877335 35.0 33.0 40.0 23.0 41.0 37 33.960174378478214 35.0 33.0 40.0 23.0 41.0 38 33.956606836832876 35.0 33.0 40.0 23.0 41.0 39 33.92167653769049 35.0 33.0 40.0 23.0 41.0 40 33.779158014047006 35.0 33.0 40.0 23.0 41.0 41 33.756590489698425 35.0 33.0 40.0 23.0 41.0 42 33.71822118758201 35.0 33.0 39.0 23.0 41.0 43 33.62324976284785 35.0 33.0 39.0 23.0 41.0 44 33.532990179170696 35.0 32.0 39.0 23.0 41.0 45 33.46557792037996 35.0 32.0 39.0 23.0 41.0 46 33.41497472129323 35.0 32.0 39.0 23.0 41.0 47 33.33711962812643 35.0 32.0 39.0 23.0 41.0 48 33.291905217822176 35.0 32.0 39.0 23.0 41.0 49 33.28680199516437 35.0 32.0 39.0 23.0 41.0 50 33.17289570494304 35.0 32.0 39.0 23.0 41.0 51 32.999494324118906 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 13.0 14 36.0 15 136.0 16 370.0 17 1126.0 18 2331.0 19 4422.0 20 7460.0 21 11486.0 22 16999.0 23 24054.0 24 33676.0 25 45546.0 26 56962.0 27 66339.0 28 74520.0 29 85834.0 30 101212.0 31 122483.0 32 151229.0 33 190698.0 34 309593.0 35 435184.0 36 205519.0 37 237043.0 38 317431.0 39 446534.0 40 288.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.71778198552566 23.597834716904597 30.01422065036498 14.67016264720476 2 28.779876338336845 27.228763902271268 30.065771779758656 13.925587979633233 3 27.253759416983858 25.950329808524863 32.32923942752471 14.466671346966573 4 24.56258697133384 29.409783658224153 31.221805856411788 14.805823514030218 5 22.262592635175032 32.94120559777435 30.54797833088974 14.248223436160877 6 20.6824148583921 41.43771351748617 27.517857209476322 10.362014414645405 7 86.93816475944446 4.686133322751786 6.7774134152996295 1.59828850250413 8 88.34564625275858 3.323487745923476 6.313351505106445 2.017514496211501 9 83.77886057759649 5.143920917854293 8.168276452427634 2.908942052121583 10 51.987346910951196 22.445463483655747 14.612371117937114 10.954818487455949 11 47.72023609060654 20.946817887834918 18.277622502610626 13.055323518947922 12 41.66101130428088 21.09027925450284 23.05386855615122 14.19484088506506 13 21.097774517394946 42.61470719806385 22.663775733594616 13.623742550946591 14 15.32418368617029 43.904401143756765 26.73085460580513 14.040560564267809 15 13.997522154267433 23.036164813030496 48.30350998752259 14.662803045179478 16 15.252147765885974 18.367599572532608 47.0720484689145 19.30820419266692 17 16.020497000368657 18.544094360272528 28.989302801498646 36.446105837860166 18 21.04734259015258 21.69376662057589 35.84824839776037 21.410642391511157 19 28.693222959652083 24.2863136160438 25.63515569967262 21.385307724631502 20 31.183888644134072 22.38387345011699 25.326391566777872 21.10584633897106 21 22.065918293494825 28.786048907777406 28.6597147255462 20.488318073181578 22 23.406247657730347 24.39870864420869 25.731271423818452 26.463772274242515 23 19.39438275831779 31.035645231910557 24.383073729307053 25.186898280464597 24 19.76260026609879 23.19865261627069 38.820272752955795 18.218474364674726 25 16.603160423384 25.31353769964616 37.287949346945545 20.795352530024296 26 16.500465147197126 34.16184816225311 27.926569486004716 21.411117204545047 27 17.99602445829768 35.160176481221654 27.49181032304583 19.351988737434837 28 14.90132876427534 29.321502349137486 37.663594287185234 18.11357459940194 29 15.81859971531567 24.220552010850156 36.8395562668707 23.121292006963472 30 17.440730615164377 31.668028362617427 31.124299608380994 19.766941413837205 31 28.422783021635535 26.811911973733345 24.802571044748074 19.962733959883046 32 30.169450597230007 25.34629979898451 26.38563161495105 18.09861798883443 33 28.453713699271738 27.059018242655913 24.67789870813548 19.809369349936865 34 19.44908800286516 27.134174362877218 28.919166133349883 24.497571500907743 35 19.608659097468603 25.808089389658367 31.472405392655116 23.11084612021791 36 30.69418683011088 24.364827342719032 26.019347274522314 18.921638552647778 37 20.944036840064996 32.20650025826438 28.01681787766035 18.83264502401028 38 20.56554302162197 32.80795271133504 24.12918441704321 22.49731984999978 39 20.192306061768427 32.19612220195223 27.921889186099236 19.689682550180105 40 24.91360946424471 25.10675662338746 25.27212722004769 24.707506692320138 41 17.06389864233996 24.503303172531115 27.32976341762282 31.103034767506106 42 21.592292292190447 24.80297802734855 25.000669825529954 28.60405985493105 43 21.335113203906083 25.36247735735345 26.95971448813968 26.34269495060079 44 19.043326350190213 29.24356518114626 29.467405611408264 22.24570285725526 45 16.879637269974282 37.28954336213074 23.295277068667122 22.53554229922785 46 22.14897665920871 32.74249634309176 25.73513775852298 19.373389239176554 47 21.23411368855453 27.602713081675645 26.13923756557931 25.023935664190518 48 23.168400242968612 24.226792410724126 30.51060376207933 22.09420358422793 49 21.9698703997824 22.89256778549575 32.38133320038568 22.756228614336166 50 19.999905037393223 33.016226057128826 26.116175218218984 20.867693687258967 51 17.866230923962423 33.66933138524328 24.734944102635588 23.729493588158707 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2679.0 1 3296.0 2 3913.0 3 12124.0 4 20335.0 5 15129.0 6 9923.0 7 10816.0 8 11709.0 9 12902.5 10 14096.0 11 14625.0 12 15154.0 13 15100.5 14 15047.0 15 14582.0 16 14117.0 17 13855.5 18 13594.0 19 12451.0 20 11308.0 21 12017.5 22 12727.0 23 12427.0 24 12127.0 25 14468.5 26 18141.5 27 19473.0 28 22634.5 29 25796.0 30 33470.5 31 41145.0 32 46974.5 33 52804.0 34 58646.5 35 64489.0 36 74256.0 37 84023.0 38 100762.5 39 117502.0 40 157746.0 41 197990.0 42 252604.5 43 307219.0 44 309273.5 45 311328.0 46 292803.0 47 274278.0 48 263092.0 49 251906.0 50 239241.0 51 226576.0 52 206905.0 53 187234.0 54 165713.5 55 144193.0 56 133259.0 57 122325.0 58 113736.5 59 105148.0 60 90059.5 61 74971.0 62 68660.5 63 62350.0 64 50191.0 65 38032.0 66 31001.0 67 23970.0 68 19257.5 69 14545.0 70 12277.5 71 10010.0 72 9166.5 73 8323.0 74 6439.5 75 3482.5 76 2409.0 77 1806.0 78 1203.0 79 924.5 80 646.0 81 521.0 82 396.0 83 234.0 84 72.0 85 60.0 86 48.0 87 31.0 88 14.0 89 10.5 90 7.0 91 5.0 92 3.0 93 3.5 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2948529.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.520458633463846 #Duplication Level Percentage of deduplicated Percentage of total 1 80.61463401144323 13.317907264378755 2 7.741497894957937 2.5578619146940014 3 2.711146509917473 1.3436815129905446 4 1.4539955387505301 0.9608269260467645 5 0.8854278203938917 0.7313836839867672 6 0.5935583816952225 0.5883514014804999 7 0.46107352267481977 0.5332002240834371 8 0.3450843708102309 0.4560761658420256 9 0.2756798457931514 0.4098921739654906 >10 2.367666456418704 8.879619911162724 >50 0.8539904908731337 10.310204905655272 >100 1.673172597061479 56.585087924390656 >500 0.021218514273684846 2.2733343062071003 >1k 0.0014420349506387763 0.32426613475764626 >5k 2.0600499294839658E-4 0.31745954082906425 >10k+ 2.0600499294839658E-4 0.41084600952920924 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12072 0.4094244960792314 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 9328 0.31636114143696736 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04256359696648736 0.0 2 0.0 0.0 0.0 0.15845189245213462 0.0 3 0.0 0.0 0.0 0.22696063019899076 0.0 4 0.0 0.0 0.0 0.36374069917575846 0.0 5 0.0 0.0 0.0 0.5833756425661745 0.0 6 0.0 0.0 0.0 0.9073337925453675 0.0 7 3.3915216706364424E-5 0.0 0.0 1.0974285821845402 0.0 8 3.3915216706364424E-5 0.0 0.0 1.63868152560141 0.0 9 3.3915216706364424E-5 0.0 0.0 1.8598426537436126 0.0 10 3.3915216706364424E-5 0.0 0.0 2.196959907804875 0.0 11 3.3915216706364424E-5 0.0 0.0 2.453189370021458 0.0 12 3.3915216706364424E-5 0.0 0.0 2.7019913997793474 0.0 13 6.783043341272885E-5 0.0 0.0 2.8002776977943915 0.0 14 6.783043341272885E-5 0.0 0.0 2.83677047097044 0.0 15 6.783043341272885E-5 0.0 0.0 2.888796413398003 0.0 16 6.783043341272885E-5 0.0 0.0 3.004209895849761 0.0 17 6.783043341272885E-5 0.0 0.0 3.133291210634184 0.0 18 6.783043341272885E-5 0.0 0.0 3.344074282464239 0.0 19 6.783043341272885E-5 0.0 0.0 3.4200782831032015 0.0 20 6.783043341272885E-5 0.0 0.0 3.508054355239511 0.0 21 6.783043341272885E-5 0.0 0.0 3.6252653441767064 0.0 22 6.783043341272885E-5 0.0 0.0 3.740916233145409 0.0 23 6.783043341272885E-5 0.0 0.0 3.877628471688764 0.0 24 6.783043341272885E-5 0.0 0.0 3.9766948196880545 0.0 25 6.783043341272885E-5 0.0 0.0 4.063483859239641 0.0 26 6.783043341272885E-5 0.0 0.0 4.150103322707696 0.0 27 6.783043341272885E-5 0.0 0.0 4.237129768776227 0.0 28 6.783043341272885E-5 0.0 0.0 4.327242499565037 0.0 29 6.783043341272885E-5 0.0 0.0 4.4170160781867835 0.0 30 1.0174565011909328E-4 0.0 0.0 4.5601382926876415 0.0 31 1.0174565011909328E-4 0.0 0.0 4.675517859922694 0.0 32 1.356608668254577E-4 0.0 0.0 4.782011640380678 0.0 33 1.356608668254577E-4 0.0 0.0 4.886741829569932 0.0 34 1.356608668254577E-4 0.0 0.0 4.998763790351053 0.0 35 1.356608668254577E-4 0.0 0.0 5.143920917854293 0.0 36 1.356608668254577E-4 0.0 0.0 5.259707467689821 0.0 37 1.356608668254577E-4 0.0 0.0 5.3762062370761825 0.0 38 2.0349130023818656E-4 0.0 0.0 5.494672089031513 0.0 39 2.0349130023818656E-4 0.0 0.0 5.616190310490418 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCGT 20 7.0350844E-4 45.000004 28 CGCATCG 65 0.0 45.000004 21 CACGCTA 40 6.8212103E-9 45.000004 36 GCACGAC 20 7.0350844E-4 45.000004 37 CGCTAAG 40 6.8212103E-9 45.000004 38 ACGTCAT 40 6.8212103E-9 45.000004 35 TCGCTAA 55 1.8189894E-12 45.0 26 TATTACG 25 3.8922968E-5 45.0 1 TACGTAG 75 0.0 45.0 1 CGTTTTT 11170 0.0 42.94539 1 TGTTACG 215 0.0 42.906975 1 GCAACGA 70 0.0 41.785713 11 TTACGTC 65 0.0 41.538464 13 TAGGCGA 65 0.0 41.538464 5 ATCGTAG 185 0.0 41.351353 1 CGTTGAT 235 0.0 41.17021 25 TCACGAC 465 0.0 41.129032 25 ACGTAGC 55 6.184564E-11 40.909092 18 TACGGGA 435 0.0 40.86207 4 CGACGGT 485 0.0 40.824745 28 >>END_MODULE