##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545495_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1755509 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.04868730379622 31.0 31.0 33.0 30.0 34.0 2 31.3276121056628 31.0 31.0 34.0 30.0 34.0 3 31.44025294088495 31.0 31.0 34.0 30.0 34.0 4 35.210961037511055 37.0 35.0 37.0 32.0 37.0 5 35.07836986309953 37.0 35.0 37.0 32.0 37.0 6 35.12259635239694 37.0 35.0 37.0 32.0 37.0 7 35.72689630187028 37.0 35.0 37.0 35.0 37.0 8 35.71431704423048 37.0 35.0 37.0 35.0 37.0 9 37.38299034638957 39.0 37.0 39.0 35.0 39.0 10 36.61389830527784 39.0 35.0 39.0 32.0 39.0 11 36.261155596468036 38.0 35.0 39.0 31.0 39.0 12 35.35911749811593 37.0 35.0 39.0 30.0 39.0 13 34.94041898959219 37.0 34.0 39.0 28.0 39.0 14 35.86398019036074 38.0 34.0 40.0 29.0 41.0 15 36.20642730968625 38.0 35.0 40.0 30.0 41.0 16 36.3761023156247 38.0 35.0 40.0 31.0 41.0 17 36.32117579573787 38.0 35.0 40.0 31.0 41.0 18 36.228073453340315 37.0 35.0 40.0 30.0 41.0 19 36.1430929718959 37.0 35.0 40.0 30.0 41.0 20 36.00770033078725 37.0 34.0 40.0 30.0 41.0 21 35.88065284769261 37.0 34.0 40.0 30.0 41.0 22 35.756109481637516 37.0 34.0 40.0 30.0 41.0 23 35.71615924498251 36.0 34.0 40.0 30.0 41.0 24 35.611215322735454 36.0 34.0 40.0 29.0 41.0 25 35.4934021984507 36.0 34.0 40.0 29.0 41.0 26 35.2954539110879 36.0 34.0 40.0 29.0 41.0 27 35.21493823158981 36.0 34.0 40.0 29.0 41.0 28 35.23341207592784 36.0 34.0 40.0 29.0 41.0 29 35.2646565753864 36.0 34.0 40.0 29.0 41.0 30 35.20244555852462 36.0 34.0 40.0 29.0 41.0 31 35.03547518127221 36.0 34.0 40.0 27.0 41.0 32 34.88913414855748 36.0 34.0 40.0 27.0 41.0 33 34.69094091799017 36.0 33.0 40.0 26.0 41.0 34 34.547751677718544 36.0 33.0 40.0 25.0 41.0 35 34.38838023615943 35.0 33.0 40.0 25.0 41.0 36 34.201665158082356 35.0 33.0 40.0 24.0 41.0 37 34.13183014157148 35.0 33.0 40.0 23.0 41.0 38 34.11326572521132 35.0 33.0 40.0 24.0 41.0 39 34.06134232293882 35.0 33.0 40.0 23.0 41.0 40 33.88298949193653 35.0 33.0 40.0 23.0 41.0 41 33.84010734208711 35.0 33.0 40.0 23.0 41.0 42 33.793479839750184 35.0 33.0 40.0 23.0 41.0 43 33.709439826284 35.0 33.0 39.0 23.0 41.0 44 33.61851576950047 35.0 32.0 39.0 23.0 41.0 45 33.537959645891874 35.0 32.0 39.0 23.0 41.0 46 33.471607379967864 35.0 32.0 39.0 23.0 41.0 47 33.392132993906614 35.0 32.0 39.0 23.0 41.0 48 33.328428393132704 35.0 32.0 39.0 23.0 41.0 49 33.33578124635078 35.0 32.0 39.0 23.0 41.0 50 33.273902896538836 35.0 32.0 39.0 23.0 41.0 51 33.10970208640343 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 3.0 13 0.0 14 24.0 15 65.0 16 231.0 17 577.0 18 1320.0 19 2535.0 20 4294.0 21 6785.0 22 9715.0 23 13773.0 24 19190.0 25 25491.0 26 32748.0 27 39249.0 28 43860.0 29 50016.0 30 59326.0 31 71776.0 32 87196.0 33 110376.0 34 177246.0 35 243656.0 36 129927.0 37 152493.0 38 198383.0 39 275069.0 40 181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.67462086494572 23.314035986144187 28.414778847616272 14.596564301293814 2 30.21949759300579 26.315216840244055 30.115823957610015 13.349461609140143 3 29.31047348660702 25.51527790515457 31.070817637505705 14.103430970732706 4 25.921257025740115 27.963342825357202 30.856634742402345 15.258765406500338 5 22.420619888590718 32.92321486247008 29.638241672358273 15.017923576580925 6 21.198638115782945 41.478226542843124 27.283995695835223 10.039139645538702 7 87.0457514031543 4.485422746337387 6.637789951518334 1.8310358989899795 8 87.65070415474942 3.9247306621612306 6.520160249819283 1.9044049332700659 9 82.87209008897135 5.754171582145121 8.245414862584013 3.128323466299518 10 50.26587730396142 24.579025228580427 13.68093242472696 11.474165042731196 11 45.03753612200222 21.017778889199658 19.62581792517156 14.318867063626561 12 41.45339044117689 20.006334345195608 23.67011504925352 14.87016016437398 13 22.41515138914127 37.10211682195876 24.086404569842706 16.396327219057266 14 16.659669645669716 40.27259330484777 26.59063553647404 16.477101513008478 15 16.24491814055069 22.308116905125523 45.29569486684489 16.151270087478903 16 17.659265774199962 18.116569040660004 44.94588179268805 19.27828339245199 17 18.032604788696613 18.565384740266214 28.492534074163107 34.90947639687407 18 21.13181988813501 21.945600962455902 34.42067229504377 22.501906854365313 19 29.244509711998056 23.97583834659919 25.57326678473309 21.20638515666966 20 31.79624826759646 21.6888093424756 25.357488910623644 21.15745347930429 21 23.715970695678575 26.84509165148114 27.504615470498873 21.93432218234142 22 23.939951318962194 24.882697838632556 24.22505381630057 26.95229702610468 23 20.907725337779528 29.490022551863877 24.527416265026268 25.07483584533033 24 21.225752758886454 22.528053117357985 37.77195104098014 18.474243082775423 25 20.01579029216028 23.68372933434121 34.32975849169671 21.9707218818018 26 18.516339135828982 31.167370830910006 27.451639382082348 22.86465065117866 27 18.86843075142309 32.576363892181696 27.858188138027206 20.697017218368003 28 17.598998353184175 28.290997084036597 36.00796122378182 18.102043338997408 29 18.1919317986977 23.91272274878682 35.14211547761931 22.75322997489617 30 19.900325204826636 29.899134666925658 29.410615382775024 20.78992474547268 31 27.509286480445272 26.759589384047587 24.91716077787126 20.813963357635874 32 30.18309789354541 25.725701206886438 26.091464071104163 17.999736828463995 33 29.056814861102964 26.72170863265298 24.07318902950654 20.14828747673752 34 21.107895203043675 26.93036606477096 26.979753450423782 24.981985281761588 35 20.574830433794418 24.937781577878553 30.653502773269746 23.833885215057286 36 29.19438180037812 25.26258765976136 25.305424238782027 20.23760630107849 37 22.04186933818055 31.200979317109738 27.75103972693959 19.006111617770117 38 22.25907130068829 30.94065595790167 23.912494894643093 22.887777846766948 39 21.709828887234416 30.789702587682548 25.839628278749927 21.660840246333116 40 24.843392998839654 25.414623337163185 25.8058489019424 23.936134762054767 41 18.044168386490757 24.660995756786207 27.758217132466996 29.53661872425604 42 22.067844710565428 25.6481168709474 24.775207646329356 27.508830772157815 43 21.581205223100536 25.906047761646338 26.47995538615866 26.032791629094472 44 20.571868329925966 28.76840847868054 27.108092296878 23.551630894515494 45 18.93245776581037 34.28726369389163 23.838100516716235 22.942178023581764 46 22.421360414557828 31.84324318474015 25.357830691839233 20.377565708862786 47 22.43873429301701 27.271919426217693 26.48787331765317 23.801472963112122 48 23.56951744479806 23.45291308674578 29.981902684634488 22.995666783821672 49 21.70999977784221 23.541548348655574 31.383718340378774 23.36473353312344 50 20.786051225029322 31.35478086412545 26.39957983695897 21.459588073886263 51 20.232593509916498 32.777445174020755 23.45023580055699 23.53972551550576 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1637.0 1 2271.0 2 2905.0 3 8558.0 4 14211.0 5 10512.5 6 6814.0 7 7190.5 8 7567.0 9 7977.5 10 8388.0 11 8442.5 12 8497.0 13 8391.5 14 8286.0 15 7819.5 16 7353.0 17 7082.0 18 6811.0 19 6676.0 20 6541.0 21 6310.5 22 6080.0 23 6718.5 24 7357.0 25 8369.0 26 10270.5 27 11160.0 28 14185.0 29 17210.0 30 20704.5 31 24199.0 32 26868.5 33 29538.0 34 33312.0 35 37086.0 36 41123.5 37 45161.0 38 54495.0 39 63829.0 40 85315.5 41 106802.0 42 132739.5 43 158677.0 44 162037.0 45 165397.0 46 156696.5 47 147996.0 48 138990.5 49 129985.0 50 126686.5 51 123388.0 52 113931.5 53 104475.0 54 97512.0 55 90549.0 56 87015.0 57 83481.0 58 77436.5 59 71392.0 60 68787.0 61 66182.0 62 61112.5 63 56043.0 64 46681.0 65 37319.0 66 32121.0 67 26923.0 68 22570.0 69 18217.0 70 16005.5 71 13794.0 72 11967.5 73 10141.0 74 8116.0 75 5049.0 76 4007.0 77 3316.5 78 2626.0 79 1885.0 80 1144.0 81 801.0 82 458.0 83 407.0 84 356.0 85 193.0 86 30.0 87 21.5 88 13.0 89 9.0 90 5.0 91 6.0 92 7.0 93 3.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1755509.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.13352315146086 #Duplication Level Percentage of deduplicated Percentage of total 1 80.78821884245042 13.841868179024107 2 6.587232637465585 2.257250057961504 3 2.2220005078053116 1.1421209142912028 4 1.200169503959209 0.8225252792704961 5 0.7809676350936611 0.669036352820944 6 0.5072603355201982 0.5214694021471873 7 0.3746649142816236 0.4493530988019008 8 0.2914916635473112 0.3995423332676557 9 0.24512552084277484 0.37798774077362257 >10 3.5890401598703923 15.69155300177964 >50 1.8666615052950295 23.46868427988266 >100 1.5418363112539368 38.935865363099914 >500 0.0036646930474919107 0.3994528581809616 >1k 9.994617402250665E-4 0.24938690159940288 >5k 6.66307826816711E-4 0.7739042370988106 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8339 0.47501892613481334 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5219 0.29729269402777203 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2207 0.12571852380135903 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.028709622109598983 0.0 2 0.0 0.0 0.0 0.09661015694023785 0.0 3 0.0 0.0 0.0 0.14052904314361248 0.0 4 5.6963535931744014E-5 0.0 0.0 0.2065497812885038 0.0 5 5.6963535931744014E-5 0.0 0.0 0.3270846233200741 0.0 6 5.6963535931744014E-5 0.0 0.0 0.500253772552576 0.0 7 5.6963535931744014E-5 0.0 0.0 0.597034820100609 0.0 8 5.6963535931744014E-5 0.0 0.0 0.8499529196375524 0.0 9 5.6963535931744014E-5 0.0 0.0 0.9645065903962896 0.0 10 5.6963535931744014E-5 0.0 0.0 1.1489545197432767 0.0 11 1.1392707186348803E-4 0.0 0.0 1.3078827849928425 0.0 12 1.1392707186348803E-4 0.0 0.0 1.4524562391876088 0.0 13 2.8481767965872007E-4 0.0 0.0 1.5142047121376194 0.0 14 2.8481767965872007E-4 0.0 0.0 1.5411484646333342 0.0 15 2.8481767965872007E-4 0.0 0.0 1.5753835497283124 0.0 16 3.417812155904641E-4 0.0 0.0 1.6519425420205764 0.0 17 3.417812155904641E-4 0.0 0.0 1.736818210558875 0.0 18 3.417812155904641E-4 0.0 0.0 1.8809929200021192 0.0 19 3.417812155904641E-4 0.0 0.0 1.935051315601344 0.0 20 3.417812155904641E-4 0.0 0.0 1.9948060647937436 0.0 21 3.417812155904641E-4 0.0 0.0 2.0722764736609154 0.0 22 3.417812155904641E-4 0.0 0.0 2.1515127521419712 0.0 23 3.417812155904641E-4 0.0 0.0 2.2402619411236286 0.0 24 3.417812155904641E-4 0.0 0.0 2.3126056317569432 0.0 25 3.417812155904641E-4 0.0 0.0 2.369512204152756 0.0 26 3.417812155904641E-4 0.0 0.0 2.427102338979749 0.0 27 3.417812155904641E-4 0.0 0.0 2.4908445356873705 0.0 28 3.417812155904641E-4 0.0 0.0 2.54963090476893 0.0 29 4.557082874539521E-4 0.0 0.0 2.613600955620279 0.0 30 5.126718233856961E-4 0.0 0.0 2.7018374727785504 0.0 31 5.126718233856961E-4 0.0 0.0 2.7831814020890806 0.0 32 5.126718233856961E-4 0.0 0.0 2.8568922175847575 0.0 33 5.126718233856961E-4 0.0 0.0 2.9279257468916424 0.0 34 5.696353593174401E-4 0.0 0.0 3.0022061977466366 0.0 35 5.696353593174401E-4 0.0 0.0 3.1086140828671343 0.0 36 5.696353593174401E-4 0.0 0.0 3.1901858663213916 0.0 37 5.696353593174401E-4 0.0 0.0 3.272953884030216 0.0 38 5.696353593174401E-4 0.0 0.0 3.350310365825524 0.0 39 5.696353593174401E-4 0.0 0.0 3.4290339724831944 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCAT 20 7.034303E-4 45.000004 42 CGTTGTA 20 7.034303E-4 45.000004 36 GACGTAT 35 1.212411E-7 45.000004 36 CGTCTTA 20 7.034303E-4 45.000004 43 TATATCG 35 1.212411E-7 45.000004 35 TATTCGA 20 7.034303E-4 45.000004 40 CCCGATA 20 7.034303E-4 45.000004 44 ACGTTAG 25 3.8916492E-5 45.0 1 TACGCAC 25 3.8916492E-5 45.0 31 CCGAATA 25 3.8916492E-5 45.0 41 ACGTACT 25 3.8916492E-5 45.0 14 ACGTAAG 55 1.8189894E-12 45.0 1 TACGTAA 25 3.8916492E-5 45.0 39 TATTACG 30 2.166158E-6 44.999996 1 CGCTTAT 30 2.166158E-6 44.999996 18 GCGTAAG 135 0.0 43.333332 1 GCGATAT 290 0.0 42.672417 9 CGTAAGG 285 0.0 42.63158 2 CGTATGG 170 0.0 42.35294 2 CGTTTTT 6180 0.0 41.868935 1 >>END_MODULE