##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545493_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3441548 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09220530993611 31.0 31.0 33.0 30.0 34.0 2 31.37196081530753 31.0 31.0 34.0 30.0 34.0 3 31.466672264922646 31.0 31.0 34.0 30.0 34.0 4 35.23049017477019 37.0 35.0 37.0 33.0 37.0 5 35.08496467287395 37.0 35.0 37.0 32.0 37.0 6 35.148022634000746 37.0 35.0 37.0 32.0 37.0 7 35.79934233083485 37.0 35.0 37.0 35.0 37.0 8 35.81343627925573 37.0 35.0 37.0 35.0 37.0 9 37.48568405845277 39.0 37.0 39.0 35.0 39.0 10 36.654110301527105 39.0 35.0 39.0 32.0 39.0 11 36.23715229309602 38.0 35.0 39.0 31.0 39.0 12 35.67513804834336 37.0 35.0 39.0 30.0 39.0 13 35.40633982149893 37.0 35.0 39.0 30.0 39.0 14 36.36817589061666 38.0 35.0 40.0 30.0 41.0 15 36.625717845574144 38.0 35.0 40.0 31.0 41.0 16 36.74371213186624 38.0 35.0 40.0 31.0 41.0 17 36.672699901323476 38.0 35.0 40.0 31.0 41.0 18 36.5545042521563 38.0 35.0 40.0 31.0 41.0 19 36.50355915419457 38.0 35.0 40.0 31.0 41.0 20 36.382972720415346 38.0 35.0 40.0 31.0 41.0 21 36.25737487897888 38.0 34.0 40.0 30.0 41.0 22 36.14791309027217 38.0 34.0 40.0 30.0 41.0 23 36.08803567464408 38.0 34.0 40.0 30.0 41.0 24 36.01035057479948 37.0 34.0 40.0 30.0 41.0 25 35.908136396760995 37.0 34.0 40.0 30.0 41.0 26 35.773786970281975 37.0 34.0 40.0 30.0 41.0 27 35.685687370915645 37.0 34.0 40.0 29.0 41.0 28 35.67737250795282 37.0 34.0 40.0 29.0 41.0 29 35.69379302569658 37.0 34.0 40.0 29.0 41.0 30 35.6042989956845 37.0 34.0 40.0 29.0 41.0 31 35.45784455134724 37.0 34.0 40.0 29.0 41.0 32 35.29137992554513 37.0 34.0 40.0 28.0 41.0 33 35.064110685075434 37.0 34.0 40.0 27.0 41.0 34 34.90319559686513 37.0 34.0 40.0 26.0 41.0 35 34.743718814905385 37.0 33.0 40.0 25.0 41.0 36 34.572152705701036 37.0 33.0 40.0 24.0 41.0 37 34.53102382997419 37.0 33.0 40.0 24.0 41.0 38 34.48486785597644 37.0 33.0 40.0 24.0 41.0 39 34.437915438052876 37.0 33.0 40.0 24.0 41.0 40 34.32280880580483 36.0 33.0 40.0 23.0 41.0 41 34.26954265929169 36.0 33.0 40.0 23.0 41.0 42 34.21468653059612 36.0 33.0 40.0 23.0 41.0 43 34.17483411534577 36.0 33.0 40.0 23.0 41.0 44 34.074790472194486 36.0 33.0 40.0 23.0 41.0 45 33.99943513790887 36.0 33.0 40.0 23.0 41.0 46 33.94492914235106 36.0 33.0 40.0 23.0 41.0 47 33.87970151803781 36.0 33.0 40.0 23.0 41.0 48 33.80976670963183 35.0 33.0 40.0 23.0 41.0 49 33.78794048492132 36.0 33.0 40.0 23.0 41.0 50 33.745748424836734 35.0 33.0 40.0 23.0 41.0 51 33.590060344937804 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 4.0 12 7.0 13 15.0 14 33.0 15 142.0 16 408.0 17 1059.0 18 2387.0 19 4635.0 20 7774.0 21 12122.0 22 17847.0 23 25170.0 24 35228.0 25 48470.0 26 62127.0 27 71553.0 28 78648.0 29 89852.0 30 106389.0 31 129073.0 32 158849.0 33 200763.0 34 304854.0 35 411122.0 36 266135.0 37 316852.0 38 432560.0 39 657073.0 40 394.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.68658406042862 24.07646210368125 29.144239743278316 15.092714092611814 2 30.79916363217947 26.693830799396085 29.46319505059932 13.043810517825118 3 28.345529395492957 25.348447849630457 32.62726540498636 13.678757349890224 4 24.95098136071326 28.318361388537948 31.86414950481586 14.866507745932935 5 22.33277002093244 33.28275531824632 30.829033911484018 13.555440749337217 6 20.827429982089456 41.515387842912546 27.205635371059767 10.451546803938228 7 87.97023897385712 3.5912327824571966 7.0664712507278695 1.3720569929578201 8 89.0708774074922 2.8812034584437 6.554841019215772 1.4930781148483183 9 84.07731055908562 5.573015398884455 8.142789233217146 2.2068848088127786 10 43.851574930816014 34.0308779653807 13.04802373815504 9.06952336564825 11 35.4194101026631 22.00518487610808 28.357123015573226 14.218282005655594 12 33.86243632225964 22.40651590505203 28.283493358221357 15.447554414466977 13 21.269847173423123 34.710543046326826 28.62055098461506 15.399058795634987 14 16.819640464116727 37.270088925099984 29.691522535789126 16.21874807499416 15 16.00358327124887 25.17544430587631 42.851269254416906 15.969703168457915 16 18.36609572204136 22.28247288720076 41.71750619198105 17.63392519877683 17 19.00586596496693 20.92526386381942 31.375764626848152 28.693105544365498 18 21.35175798797518 23.67699070302085 35.03074779140085 19.940503517603126 19 26.956997258210553 24.74066902452036 28.930934567816575 19.371399149452515 20 28.77414465815964 24.29441634985187 27.924701326263644 19.00673766572484 21 22.867325982377697 27.973661852166526 30.07507086927162 19.083941296184157 22 23.015021147460388 24.79901486191679 28.986461906095744 23.19950208452708 23 19.994839531513144 29.551498337376085 28.371186454467583 22.082475676643185 24 19.179450642559686 25.273626867909442 37.695653235113966 17.851269254416906 25 18.099820197190333 26.87680078848239 35.31375997080384 19.70961904352344 26 18.208724678545817 32.21669434800851 29.903026196351178 19.671554777094492 27 18.620370833125094 32.31734672885573 29.94864520268205 19.113637235337123 28 16.85805341084884 28.264461225006887 36.98158503092213 17.89590033322214 29 17.644908628326554 25.249451700223275 36.465625352312394 20.640014319137784 30 19.089549237726743 29.747747234674627 32.071992022194664 19.090711505403963 31 25.37930605646064 27.28455334634298 27.99182228462308 19.344318312573293 32 26.853468264862208 26.548547339743628 28.720273551320513 17.877710844073654 33 25.447414942345713 28.251443827022026 27.443667791354354 18.857473439277904 34 19.742540275480685 27.869435498211853 30.121067612597585 22.266956613709876 35 20.37280898014498 27.140374040983883 31.429810073838865 21.05700690503227 36 26.28936164772364 27.123986066735085 28.034942415447933 18.55170987009334 37 21.021383400725487 31.553330071235386 29.070290462315214 18.354996065723913 38 20.59561569386799 32.159597948365096 27.12703701938779 20.117749338379124 39 20.828214512771577 31.218044903049442 27.839390878755722 20.11434970542326 40 23.34795272359996 27.197731950854674 27.697390825291407 21.756924500253955 41 18.494410073606414 26.37807172818743 28.839231648083945 26.288286550122216 42 20.920789133262126 27.160568441875576 27.062502106610165 24.856140318252134 43 21.23849500283012 27.882046102509683 27.875450233441462 23.00400866121873 44 20.23490592024287 29.731678884037066 29.362775123287545 20.670640072432523 45 18.68211630347739 33.965384181769366 26.178742821544258 21.173756693208986 46 20.444753349364877 32.387809206787175 27.514130269285797 19.653307174562144 47 21.12613277513491 28.227501112871302 28.21146181892567 22.43490429306812 48 22.015238491516026 26.09096255522224 31.05712894313838 20.836670010123353 49 20.4830791260212 26.40741898703723 31.51006465695088 21.599437229990688 50 19.67085741648816 31.458982992537077 28.43229267759741 20.437866913377352 51 19.03373133252827 32.402017929141195 26.77443406281127 21.789816675519273 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2891.0 1 3518.0 2 4145.0 3 18400.0 4 32655.0 5 24334.5 6 16014.0 7 16464.0 8 16914.0 9 17861.5 10 18809.0 11 19231.5 12 19654.0 13 19564.0 14 19474.0 15 19328.5 16 19183.0 17 17365.0 18 15547.0 19 15785.5 20 16024.0 21 15812.0 22 15600.0 23 19861.0 24 24122.0 25 25945.0 26 32779.5 27 37791.0 28 47740.5 29 57690.0 30 66509.0 31 75328.0 32 83339.5 33 91351.0 34 109522.0 35 127693.0 36 134275.5 37 140858.0 38 156681.0 39 172504.0 40 208898.0 41 245292.0 42 278292.5 43 311293.0 44 325430.0 45 339567.0 46 320062.0 47 300557.0 48 275057.5 49 249558.0 50 234320.5 51 219083.0 52 202378.5 53 185674.0 54 169062.0 55 152450.0 56 136967.5 57 121485.0 58 108191.0 59 94897.0 60 87420.5 61 79944.0 62 71588.5 63 63233.0 64 51673.0 65 40113.0 66 35451.0 67 30789.0 68 24345.0 69 17901.0 70 15680.5 71 13460.0 72 12124.0 73 10788.0 74 8311.5 75 4834.0 76 3833.0 77 2867.5 78 1902.0 79 1452.0 80 1002.0 81 799.5 82 597.0 83 373.0 84 149.0 85 97.0 86 45.0 87 45.5 88 46.0 89 39.5 90 33.0 91 18.0 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3441548.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.21549898234374 #Duplication Level Percentage of deduplicated Percentage of total 1 80.2164607573745 13.809663985357973 2 7.16054813596523 2.465448182954655 3 2.5441893131431685 1.313984655939181 4 1.3362259246292827 0.9201518418254695 5 0.8607551181534226 0.7409164430308705 6 0.6123613255677731 0.6325263466283195 7 0.4469702381474491 0.5386370975975744 8 0.3626925732796111 0.49951469009590205 9 0.3030356653482464 0.46952191695749335 >10 3.3109676056011192 13.434779232931996 >50 1.247928398092898 15.518506338222007 >100 1.586832355066991 47.61610471355897 >500 0.010014196741294184 1.0971029898208393 >1k 6.789285926301141E-4 0.1928827794121174 >5k 1.6973214815752853E-4 0.2115545103686911 >10k+ 1.6973214815752853E-4 0.5387042752979543 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18436 0.5356891724305457 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7240 0.21037044957676024 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024611018065126507 0.0 2 0.0 0.0 0.0 0.08853574031220834 0.0 3 0.0 0.0 0.0 0.13659550876524168 0.0 4 0.0 0.0 0.0 0.20139193177023829 0.0 5 0.0 0.0 0.0 0.33089760770444 0.0 6 0.0 0.0 0.0 0.5397280526088841 0.0 7 0.0 0.0 0.0 0.6507827291672236 0.0 8 2.9056691930491745E-5 0.0 0.0 0.9418726689268899 0.0 9 2.9056691930491745E-5 0.0 0.0 1.080211579207961 0.0 10 2.9056691930491745E-5 0.0 0.0 1.2926741106037167 0.0 11 2.9056691930491745E-5 0.0 0.0 1.4516723288473676 0.0 12 2.9056691930491745E-5 0.0 0.0 1.5863500959451968 0.0 13 2.9056691930491745E-5 0.0 0.0 1.6500423646568347 0.0 14 2.9056691930491745E-5 0.0 0.0 1.6790990565873265 0.0 15 2.9056691930491745E-5 0.0 0.0 1.7137346333684726 0.0 16 2.9056691930491745E-5 0.0 0.0 1.789340145771612 0.0 17 2.9056691930491745E-5 0.0 0.0 1.8799679679028158 0.0 18 2.9056691930491745E-5 0.0 0.0 2.01790008449686 0.0 19 5.811338386098349E-5 0.0 0.0 2.0805753689909308 0.0 20 5.811338386098349E-5 0.0 0.0 2.151502753993261 0.0 21 5.811338386098349E-5 0.0 0.0 2.237278108572073 0.0 22 8.717007579147524E-5 0.0 0.0 2.3353735005294127 0.0 23 8.717007579147524E-5 0.0 0.0 2.445876099941073 0.0 24 8.717007579147524E-5 0.0 0.0 2.5328427788890346 0.0 25 8.717007579147524E-5 0.0 0.0 2.6035377103559214 0.0 26 8.717007579147524E-5 0.0 0.0 2.676847744096552 0.0 27 1.1622676772196698E-4 0.0 0.0 2.755213642233088 0.0 28 1.1622676772196698E-4 0.0 0.0 2.8351776584258013 0.0 29 1.1622676772196698E-4 0.0 0.0 2.9226964145204426 0.0 30 1.1622676772196698E-4 0.0 0.0 3.0484247205036805 0.0 31 1.452834596524587E-4 0.0 0.0 3.1489318178912513 0.0 32 1.452834596524587E-4 0.0 0.0 3.2453128650246925 0.0 33 1.452834596524587E-4 0.0 0.0 3.340502587788983 0.0 34 1.452834596524587E-4 0.0 0.0 3.4422591229295656 0.0 35 1.452834596524587E-4 0.0 0.0 3.571212721717088 0.0 36 1.452834596524587E-4 0.0 0.0 3.6840398564831873 0.0 37 1.452834596524587E-4 0.0 0.0 3.7976805786233405 0.0 38 1.452834596524587E-4 0.0 0.0 3.912803192051949 0.0 39 1.452834596524587E-4 0.0 0.0 4.039868105863989 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGCG 35 1.2128658E-7 45.000004 1 CGTTTTT 15065 0.0 43.103218 1 TTGTCGA 50 1.0822987E-9 40.5 17 CGTTAGG 525 0.0 40.285717 2 TACGGGA 1365 0.0 40.21978 4 TCGATAG 140 0.0 40.178574 1 AGGGCGA 3210 0.0 39.88318 6 TATTGCG 170 0.0 39.705883 1 CGCTATA 40 3.4609002E-7 39.375 37 TACGTAC 40 3.4609002E-7 39.375 34 ACGCGCC 40 3.4609002E-7 39.375 28 TAACGGG 980 0.0 38.80102 3 CGGTCTA 215 0.0 38.720932 31 TCGACGA 35 6.2519193E-6 38.57143 16 AATACGC 35 6.2519193E-6 38.57143 31 GCGTAAG 280 0.0 38.57143 1 CGTAAGG 570 0.0 38.289474 2 CGAGGGA 2295 0.0 38.235294 4 GCGCGAC 455 0.0 38.076923 9 TAGCGGG 2180 0.0 37.77523 3 >>END_MODULE