SRR1545492_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545492_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	119301
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1549	1.298396492904502	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	133	0.11148272017837235	No Hit
GAGACATGGAATGCTTAGTAATCTTATTTGCCTGTCTTTGTCTTTGGTCTC	129	0.10812985641360927	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAATTGG	30	2.1491232E-6	45.000004	2
GCGATAG	30	2.1491232E-6	45.000004	9
TGAACGG	20	7.007866E-4	45.0	2
AATGGGC	20	7.007866E-4	45.0	4
GTAGGGT	35	1.1997327E-7	45.0	4
ATAGAAC	20	7.007866E-4	45.0	37
CACGAGC	25	3.8697504E-5	45.0	41
TACGGGA	25	3.8697504E-5	45.0	4
TAACGGG	20	7.007866E-4	45.0	3
CGACAGG	20	7.007866E-4	45.0	2
TATGCCA	25	3.8697504E-5	45.0	10
TCGATCA	25	3.8697504E-5	45.0	17
ACGGGAT	40	6.726623E-9	45.0	5
GTAATCT	20	7.007866E-4	45.0	18
CTACGGG	20	7.007866E-4	45.0	3
AGCATAT	45	3.783498E-10	45.0	31
CAAGGGT	20	7.007866E-4	45.0	4
CCATAGC	20	7.007866E-4	45.0	35
CGGGATC	35	1.1997327E-7	45.0	6
GGAGTGC	25	3.8697504E-5	45.0	8