##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545492_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 119301 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.008843178179564 31.0 31.0 33.0 28.0 34.0 2 31.323283124198458 31.0 31.0 34.0 30.0 34.0 3 31.349561193954788 31.0 31.0 34.0 28.0 34.0 4 35.18247961039723 37.0 35.0 37.0 32.0 37.0 5 35.0855231724797 37.0 35.0 37.0 32.0 37.0 6 35.13701477774704 37.0 35.0 37.0 32.0 37.0 7 35.71017845617388 37.0 35.0 37.0 35.0 37.0 8 35.68073193015985 37.0 35.0 37.0 35.0 37.0 9 37.312989832440635 39.0 37.0 39.0 35.0 39.0 10 36.6077736146386 39.0 35.0 39.0 32.0 39.0 11 36.3314808761033 38.0 35.0 39.0 32.0 39.0 12 35.91538210073679 37.0 35.0 39.0 31.0 39.0 13 35.76353928299008 38.0 35.0 39.0 30.0 39.0 14 36.80653976077317 39.0 35.0 41.0 31.0 41.0 15 36.95870948273694 39.0 35.0 41.0 31.0 41.0 16 36.979455327281414 39.0 35.0 41.0 31.0 41.0 17 36.891836614948744 38.0 35.0 41.0 31.0 41.0 18 36.68399259017108 38.0 35.0 40.0 31.0 41.0 19 36.48893135849658 38.0 35.0 40.0 30.0 41.0 20 36.29102019262202 38.0 35.0 40.0 30.0 41.0 21 36.14284037853832 38.0 34.0 40.0 30.0 41.0 22 36.076051332344235 38.0 34.0 40.0 30.0 41.0 23 35.99720035875642 37.0 34.0 40.0 30.0 41.0 24 35.873127635141365 37.0 34.0 40.0 30.0 41.0 25 35.748593892758656 37.0 34.0 40.0 30.0 41.0 26 35.62217416450826 37.0 34.0 40.0 29.0 41.0 27 35.51353299637052 37.0 34.0 40.0 29.0 41.0 28 35.422050108548966 37.0 34.0 40.0 28.0 41.0 29 35.31982967452075 37.0 34.0 40.0 27.0 41.0 30 35.1633096118222 37.0 34.0 40.0 27.0 41.0 31 34.92646331547933 37.0 33.0 40.0 25.0 41.0 32 34.5981257491555 37.0 33.0 40.0 24.0 41.0 33 34.1919598326921 37.0 33.0 40.0 22.0 41.0 34 33.77278480482142 37.0 33.0 40.0 20.0 41.0 35 33.460834360147864 36.0 32.0 40.0 18.0 41.0 36 33.26963730396225 36.0 32.0 40.0 18.0 41.0 37 33.193049513415644 36.0 32.0 40.0 18.0 41.0 38 33.089437640925055 36.0 32.0 40.0 17.0 41.0 39 32.996948893974064 36.0 31.0 40.0 16.0 41.0 40 32.87077224834662 36.0 31.0 40.0 15.0 41.0 41 32.74371547598092 36.0 31.0 40.0 15.0 41.0 42 32.665006999103106 35.0 31.0 40.0 15.0 41.0 43 32.576021994786295 35.0 31.0 40.0 15.0 41.0 44 32.42316493575075 35.0 31.0 40.0 14.0 41.0 45 32.36412100485327 35.0 31.0 40.0 14.0 41.0 46 32.29845516802038 35.0 31.0 39.0 14.0 41.0 47 32.201926220232856 35.0 30.0 39.0 14.0 41.0 48 32.11700656323082 35.0 30.0 39.0 13.0 41.0 49 32.04248078389955 35.0 30.0 39.0 13.0 41.0 50 31.98088029438144 35.0 30.0 39.0 12.0 41.0 51 31.85614538017284 35.0 30.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 6.0 16 18.0 17 54.0 18 127.0 19 263.0 20 394.0 21 652.0 22 916.0 23 1343.0 24 1796.0 25 2537.0 26 3162.0 27 3755.0 28 3658.0 29 3622.0 30 3907.0 31 4587.0 32 5366.0 33 6534.0 34 9183.0 35 11591.0 36 9766.0 37 11569.0 38 14833.0 39 19648.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.35346728024074 22.496039429677875 24.95201213736683 21.198481152714564 2 38.2125883270048 23.869037141348354 25.292327809490278 12.62604672215656 3 27.308237148054083 24.11547262805844 35.44060820948693 13.13568201440055 4 24.13475159470583 26.310760178037068 34.97036906647891 14.5841191607782 5 21.549693632073495 29.512745073385805 34.71471320441572 14.222848090124979 6 19.286510590858416 38.57888869330517 32.10869984325362 10.025900872582795 7 80.16026688795567 3.8088532367708567 14.20356912347759 1.8273107517958778 8 80.38742340801838 3.459317189294306 14.137350064123519 2.0159093385638007 9 75.3078348044023 5.650413659566977 15.828869833446493 3.21288170258422 10 37.03992422527892 28.622559743841208 22.119680472083218 12.217835558796656 11 30.916756774880344 23.94112371229076 30.284741955222504 14.857377557606391 12 28.63680941484145 21.179202186067176 34.01899397322738 16.16499442586399 13 22.14315051843656 27.139755743874737 33.77507313434087 16.942020603347835 14 18.796154265261816 28.679558427842185 34.90834108683079 17.61594622006521 15 18.128934376073964 22.96124927703875 41.87978306971442 17.030033277172866 16 19.87745282939791 21.699734285546644 40.090192035272125 18.33262084978332 17 20.468395067937404 20.82882792264943 34.93767864477247 23.7650983646407 18 22.32504337767496 22.067711083729392 36.32157316367843 19.285672374917226 19 25.365252596373878 23.751686909581647 32.26628444019749 18.61677605384699 20 26.368597077979228 23.535427196754426 31.67953328136395 18.416442443902397 21 23.673732827050905 24.289821543826122 34.161490683229815 17.874954945893162 22 22.6117132295622 23.075246645040696 32.70383316149906 21.60920696389804 23 20.66034651847009 25.414707336904137 32.88404958885508 21.040896555770697 24 20.22531244499208 23.306594244809347 37.8588611998223 18.609232110376276 25 20.36948558687689 24.379510649533533 35.34253694436761 19.908466819221967 26 19.169998575032903 27.365235832055053 32.56636574714378 20.898399845768267 27 19.07276552585477 25.893328639324064 34.523599969824225 20.51030586499694 28 18.98559106797093 25.33675325437339 36.57471437791804 19.102941299737637 29 19.458344858802526 23.95369695140862 36.528612501152544 20.059345688636306 30 20.29907544781687 25.782684135086882 35.03239704612702 18.88584337096923 31 23.827964560230004 25.141448940075943 31.964526701368808 19.066059798325245 32 24.98637899095565 24.81286829112916 31.317423994769534 18.883328723145656 33 24.35604060318019 25.38034048331531 30.26797763639869 19.995641277105808 34 21.104600967301195 26.377817453332327 31.24701385570951 21.27056772365697 35 21.146511764360735 26.73992673992674 31.605770278539158 20.50779121717337 36 24.8095154273644 26.93858391798895 28.301523038365143 19.950377616281507 37 21.86402461002003 29.342587237324082 29.325822918500265 19.46756523415562 38 22.201825634319913 28.998918701435866 28.449049044014718 20.350206620229503 39 21.647764897192815 28.63764763078264 28.5144298874276 21.200157584596944 40 23.553029731519434 26.130543750681053 29.153988650556155 21.16243786724336 41 20.16412268128515 26.072706850738886 29.92347088456928 23.839699583406677 42 21.620103771133518 26.76507321816246 28.158188112421524 23.4566348982825 43 21.27308237148054 26.75920570657413 29.251221699734288 22.716490222211046 44 21.19345185706742 27.52114399711654 29.860604688979976 21.42479945683607 45 20.11550615669609 29.928500180216428 28.073528302361257 21.88246536072623 46 21.05598444271213 29.43982028650221 28.483415897603543 21.02077937318212 47 21.221112983126712 27.696331128825406 29.42976169520792 21.65279419283996 48 20.965457121063526 26.930201758577045 30.83544982858484 21.268891291774587 49 21.604177668250895 26.529534538687855 30.42556223334255 21.440725559718697 50 20.24459141163947 29.3224700547355 29.615007418211082 20.817931115413955 51 20.03084634663582 29.454908173443645 28.80026152337365 21.713983956546887 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 113.0 1 164.5 2 216.0 3 1502.5 4 2789.0 5 2054.0 6 1319.0 7 1336.5 8 1354.0 9 1408.0 10 1462.0 11 1439.0 12 1416.0 13 1360.5 14 1305.0 15 1285.5 16 1266.0 17 1187.0 18 1108.0 19 1054.5 20 1001.0 21 982.5 22 964.0 23 945.0 24 926.0 25 945.0 26 1152.0 27 1340.0 28 1437.0 29 1534.0 30 1792.5 31 2051.0 32 2358.5 33 2666.0 34 3128.0 35 3590.0 36 3735.5 37 3881.0 38 4354.5 39 4828.0 40 5502.0 41 6176.0 42 6752.5 43 7329.0 44 7534.0 45 7739.0 46 7774.5 47 7810.0 48 7579.5 49 7349.0 50 7238.0 51 7127.0 52 6939.5 53 6752.0 54 6256.0 55 5760.0 56 5559.5 57 5359.0 58 5155.0 59 4951.0 60 4588.0 61 4225.0 62 3821.5 63 3418.0 64 3046.0 65 2674.0 66 2305.5 67 1937.0 68 1726.0 69 1515.0 70 1331.5 71 1148.0 72 1005.5 73 863.0 74 687.0 75 394.0 76 277.0 77 217.5 78 158.0 79 111.0 80 64.0 81 45.5 82 27.0 83 22.5 84 18.0 85 14.0 86 10.0 87 9.5 88 9.0 89 4.5 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 119301.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.97013436601537 #Duplication Level Percentage of deduplicated Percentage of total 1 73.07917576273894 46.01805517137325 2 13.560247058197113 17.07781158582074 3 6.565145625898515 12.402243065858627 4 3.321175656248336 8.36539509308388 5 1.690538309994143 5.322671226561386 6 0.8386134923592994 3.1684562577011093 7 0.39135296310100637 1.7250484069706036 8 0.19035195144028538 0.9589190367222404 9 0.12246419253500879 0.6940427993059572 >10 0.2276236622118098 2.3620925222755886 >50 0.009317927692881103 0.3872557648301355 >100 0.0026622650551088867 0.21961257659198163 >500 0.0 0.0 >1k 0.0013311325275544433 1.298396492904502 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1549 1.298396492904502 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 133 0.11148272017837235 No Hit GAGACATGGAATGCTTAGTAATCTTATTTGCCTGTCTTTGTCTTTGGTCTC 129 0.10812985641360927 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0192789666473877 0.0 2 0.0 0.0 0.0 0.06286619558930771 0.0 3 0.0 0.0 0.0 0.1181884477078985 0.0 4 0.0 0.0 0.0 0.1592610288262462 0.0 5 0.0 0.0 0.0 0.24978835047484932 0.0 6 0.0 0.0 0.0 0.46940092706683095 0.0 7 0.0 0.0 0.0 0.5909422385394926 0.0 8 0.0 0.0 0.0 0.8130694629550465 0.0 9 0.0 0.0 0.0 0.9471840135455696 0.0 10 0.0 0.0 0.0 1.1056068264306251 0.0 11 0.0 0.0 0.0 1.214574898785425 0.0 12 0.0 0.0 0.0 1.305940436375219 0.0 13 0.0 0.0 0.0 1.3671302000821453 0.0 14 0.0 0.0 0.0 1.4123938609064468 0.0 15 0.0 0.0 0.0 1.4400549869657422 0.0 16 0.0 0.0 0.0 1.4819657840252807 0.0 17 0.0 0.0 0.0 1.5389644680262529 0.0 18 0.0 0.0 0.0 1.6144039027334223 0.0 19 0.0 0.0 0.0 1.6487707563222438 0.0 20 0.0 0.0 0.0 1.6948726330877362 0.0 21 0.0 0.0 0.0 1.7309159185589391 0.0 22 0.0 0.0 0.0 1.7837235228539576 0.0 23 0.0 0.0 0.0 1.8398839909137392 0.0 24 0.0 0.0 0.0 1.8968826749147116 0.0 25 0.0 0.0 0.0 1.9379552560330593 0.0 26 0.0 0.0 0.0 1.986571780622124 0.0 27 0.0 0.0 0.0 2.040217600858333 0.0 28 0.0 0.0 0.0 2.0905105573297793 0.0 29 0.0 0.0 0.0 2.124877410918601 0.0 30 0.0 0.0 0.0 2.214566516626013 0.0 31 0.0 0.0 0.0 2.272403416568176 0.0 32 0.0 0.0 0.0 2.335269612157484 0.0 33 0.0 0.0 0.0 2.411547262805844 0.0 34 0.0 0.0 0.0 2.495368856924921 0.0 35 0.0 0.0 0.0 2.579190451043998 0.0 36 0.0 0.0 0.0 2.6571445335747397 0.0 37 0.0 0.0 0.0 2.7443189914585795 0.0 38 0.0 0.0 0.0 2.8365227449895642 0.0 39 0.0 0.0 0.0 2.9664462158741336 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATTGG 30 2.1491232E-6 45.000004 2 GCGATAG 30 2.1491232E-6 45.000004 9 TGAACGG 20 7.007866E-4 45.0 2 AATGGGC 20 7.007866E-4 45.0 4 GTAGGGT 35 1.1997327E-7 45.0 4 ATAGAAC 20 7.007866E-4 45.0 37 CACGAGC 25 3.8697504E-5 45.0 41 TACGGGA 25 3.8697504E-5 45.0 4 TAACGGG 20 7.007866E-4 45.0 3 CGACAGG 20 7.007866E-4 45.0 2 TATGCCA 25 3.8697504E-5 45.0 10 TCGATCA 25 3.8697504E-5 45.0 17 ACGGGAT 40 6.726623E-9 45.0 5 GTAATCT 20 7.007866E-4 45.0 18 CTACGGG 20 7.007866E-4 45.0 3 AGCATAT 45 3.783498E-10 45.0 31 CAAGGGT 20 7.007866E-4 45.0 4 CCATAGC 20 7.007866E-4 45.0 35 CGGGATC 35 1.1997327E-7 45.0 6 GGAGTGC 25 3.8697504E-5 45.0 8 >>END_MODULE