SRR1545491_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545491_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2468141
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13527	0.5480643123711328	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	6678	0.2705680104985898	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCGTAT	30	2.1665182E-6	45.000004	42
CGAGTTA	35	1.2126839E-7	45.0	13
CGTAAAC	25	3.8921127E-5	45.0	35
ATACGAG	90	0.0	42.5	1
CGTTTTT	9085	0.0	41.50798	1
CGACATA	55	6.184564E-11	40.909092	14
ATACCGG	100	0.0	40.5	2
AACGGGA	420	0.0	40.178574	4
AGCGTAA	40	3.4603727E-7	39.375	18
TCGCATA	40	3.4603727E-7	39.375	38
ACCGGTA	40	3.4603727E-7	39.375	41
CGCATAT	40	3.4603727E-7	39.375	39
TACGGGA	530	0.0	39.056602	4
TATGGGA	1690	0.0	38.87574	4
TTAACGG	220	0.0	38.86364	2
ATCGGAT	35	6.2512045E-6	38.571426	33
CCCGAAT	35	6.2512045E-6	38.571426	42
GGGCGAT	4440	0.0	38.158783	7
GGCGATA	1015	0.0	37.68473	8
ATTACGT	30	1.1403015E-4	37.500004	20