##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545490_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1838121 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.151689687458006 31.0 31.0 33.0 30.0 34.0 2 31.4320798249952 31.0 31.0 34.0 30.0 34.0 3 31.509949562624005 31.0 31.0 34.0 30.0 34.0 4 35.30851287809671 37.0 35.0 37.0 33.0 37.0 5 35.197562075619615 37.0 35.0 37.0 32.0 37.0 6 35.24328648658059 37.0 35.0 37.0 32.0 37.0 7 35.79369040449459 37.0 35.0 37.0 35.0 37.0 8 35.778378572466124 37.0 35.0 37.0 35.0 37.0 9 37.421411865704165 39.0 37.0 39.0 35.0 39.0 10 36.71943305146941 39.0 37.0 39.0 32.0 39.0 11 36.44038504538058 38.0 35.0 39.0 32.0 39.0 12 35.76826008733919 37.0 35.0 39.0 31.0 39.0 13 35.50006283590689 37.0 35.0 39.0 30.0 39.0 14 36.47885802947684 38.0 35.0 40.0 31.0 41.0 15 36.666873943554315 38.0 35.0 40.0 31.0 41.0 16 36.75054961017256 38.0 35.0 40.0 31.0 41.0 17 36.627440739755436 38.0 35.0 40.0 31.0 41.0 18 36.53270540949154 38.0 35.0 40.0 31.0 41.0 19 36.47871222841152 38.0 35.0 40.0 31.0 41.0 20 36.36517019282191 38.0 35.0 40.0 31.0 41.0 21 36.237619830250566 38.0 34.0 40.0 30.0 41.0 22 36.133720794224104 38.0 34.0 40.0 30.0 41.0 23 36.06697056396178 38.0 34.0 40.0 30.0 41.0 24 35.96576231923796 37.0 34.0 40.0 30.0 41.0 25 35.85640227166764 37.0 34.0 40.0 30.0 41.0 26 35.685161096576344 37.0 34.0 40.0 30.0 41.0 27 35.58272605557523 37.0 34.0 40.0 29.0 41.0 28 35.55940114932586 37.0 34.0 40.0 29.0 41.0 29 35.52966643654036 37.0 34.0 40.0 29.0 41.0 30 35.42617107361267 37.0 34.0 40.0 29.0 41.0 31 35.284399666833686 37.0 34.0 40.0 28.0 41.0 32 35.11392884363978 37.0 34.0 40.0 27.0 41.0 33 34.891794392208126 37.0 33.0 40.0 26.0 41.0 34 34.684908120847325 37.0 33.0 40.0 25.0 41.0 35 34.53725842858005 36.0 33.0 40.0 24.0 41.0 36 34.3973884200224 36.0 33.0 40.0 24.0 41.0 37 34.3525747216859 36.0 33.0 40.0 24.0 41.0 38 34.271265058176255 36.0 33.0 40.0 24.0 41.0 39 34.21397394404394 36.0 33.0 40.0 23.0 41.0 40 34.06677688791979 36.0 33.0 40.0 23.0 41.0 41 33.993864386512094 36.0 33.0 40.0 23.0 41.0 42 33.93495313964641 35.0 33.0 40.0 23.0 41.0 43 33.846812587419436 35.0 33.0 40.0 23.0 41.0 44 33.69514194114533 35.0 33.0 40.0 23.0 41.0 45 33.579029889762424 35.0 32.0 40.0 23.0 41.0 46 33.526158506431294 35.0 32.0 39.0 23.0 41.0 47 33.44292894755024 35.0 32.0 39.0 23.0 41.0 48 33.361810783947305 35.0 32.0 39.0 23.0 41.0 49 33.354250889903334 35.0 32.0 39.0 23.0 41.0 50 33.30110204932102 35.0 32.0 39.0 23.0 41.0 51 33.14303954962704 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 13.0 14 26.0 15 65.0 16 204.0 17 533.0 18 1186.0 19 2331.0 20 4097.0 21 6416.0 22 9645.0 23 13748.0 24 19187.0 25 26231.0 26 33514.0 27 38712.0 28 43377.0 29 49379.0 30 58395.0 31 71186.0 32 86856.0 33 110814.0 34 171958.0 35 222516.0 36 149808.0 37 179508.0 38 233736.0 39 304531.0 40 144.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.66775092608158 23.383226675501774 26.93870534094328 16.010317057473365 2 33.53402741168835 25.707447986286 27.6761431918791 13.082381410146557 3 29.79771190253525 25.563007005523573 30.945786485220506 13.69349460672067 4 26.355065852574448 28.430881318476857 30.258399746262622 14.955653082686068 5 22.65449336577951 32.06208949247629 29.954774468057327 15.328642673686879 6 21.577360793984727 40.698517671034715 27.49470791095907 10.229413624021486 7 85.53299809968985 4.305483697754391 8.09603937934445 2.065478823211312 8 86.04090807950075 3.706720069027012 7.958725241700628 2.293646609771609 9 80.40139903738654 6.106398871456232 9.763611862331151 3.7285902288260675 10 45.070754319220555 27.015359707005143 15.188064333087976 12.72582164068633 11 40.820870878467744 23.70480506996003 20.919950318831024 14.554373732741208 12 36.1987594940703 21.158073924404324 25.928271316197353 16.714895265328018 13 24.001412311811897 30.914613346999463 27.020147204672597 18.06382713651604 14 19.337573532971987 34.06647331704496 29.409761381323644 17.18619176865941 15 19.31211274992234 22.59954594936895 41.118457381206134 16.96988391950258 16 21.76809905332674 19.77731607440424 40.18979164048504 18.26479323178398 17 21.03724401168367 19.646747956200926 30.382493861938357 28.933514170177045 18 24.13720315474335 22.668039808043105 31.5911194094404 21.603637627773146 19 29.272719260592744 24.028722809869425 26.674250498198976 20.02430743133885 20 31.602870540078698 23.497038551869 25.291642933191017 19.608447974861285 21 26.494828142434585 25.8690260325626 27.581263692651355 20.054882132351462 22 25.237892391197313 23.913442042172413 26.36431442761385 24.484351139016418 23 23.870953000373753 27.464405226859384 25.872072621987346 22.792569150779517 24 23.019213642627445 22.835711033169197 33.42152121650316 20.723554107700203 25 22.071833138297205 22.951481431309475 32.384211920760386 22.592473509632935 26 20.40121406588576 29.264613156587625 27.904637398734906 22.429535378791712 27 21.022663905150967 29.237411465295267 27.975144182564694 21.76478044698907 28 19.850271010450346 27.623371910771926 32.91235995889281 19.613997119884928 29 21.875545733931553 24.76735753522211 32.544103462176864 20.812993268669473 30 22.91269181952657 26.40712988970802 29.963587816036053 20.716590474729358 31 28.558457250638014 25.19377124792111 26.005524119467655 20.242247381973222 32 29.77094543830357 24.907011018317075 27.087825012607986 18.234218530771372 33 28.290520591408292 25.714139602343916 25.583081853697337 20.41225795255046 34 23.011597169065585 26.95965064323839 28.35085394269474 21.67789824500128 35 22.79349400828346 26.181410255364035 29.03742463091385 21.987671105438654 36 28.05190735539173 27.105560515330602 25.30453653486359 19.537995594414078 37 24.97637533111259 30.166566836459623 25.66441491066149 19.192642921766303 38 24.20689388783437 30.22771623848484 23.680758774857587 21.884631098823203 39 23.917522295866267 28.4720102757109 25.40676049074027 22.203706937682558 40 25.267759848236327 24.7951576637229 26.40789153706421 23.529190950976567 41 20.05069307189244 25.904279424477494 26.941806333750606 27.10322116987946 42 23.767749783610544 25.783014284696165 24.473144042203966 25.97609188948932 43 23.774495803051053 25.39016745905193 25.493588289345475 25.341748448551538 44 23.343512206214932 27.875966816112758 26.810639778338857 21.96988119933345 45 21.752974912968188 30.430260031847737 24.955593238965225 22.861171816218846 46 22.819390018393783 29.742710082742104 25.814840263508227 21.623059635355887 47 23.287585528917845 26.959759450003563 26.763200028724988 22.989454992353604 48 23.88221450056879 24.575259191315478 28.929216302952852 22.61331000516288 49 23.098098547375283 24.420590374627132 29.425755975803554 23.055555102194035 50 20.953190785590284 29.359003025372104 26.712006445712767 22.97579974332484 51 20.573835998827064 30.145784744312266 25.810814413196955 23.469564843663722 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1986.0 1 2887.0 2 3788.0 3 12254.0 4 20720.0 5 15093.5 6 9467.0 7 9449.0 8 9431.0 9 9991.0 10 10551.0 11 10660.0 12 10769.0 13 10535.5 14 10302.0 15 10267.5 16 10233.0 17 9620.5 18 9008.0 19 8612.5 20 8217.0 21 8410.5 22 8604.0 23 9405.5 24 10207.0 25 11033.5 26 12872.5 27 13885.0 28 16821.5 29 19758.0 30 21189.5 31 22621.0 32 25727.0 33 28833.0 34 32713.0 35 36593.0 36 40286.0 37 43979.0 38 50801.0 39 57623.0 40 76332.0 41 95041.0 42 111086.5 43 127132.0 44 131935.0 45 136738.0 46 131600.0 47 126462.0 48 124258.5 49 122055.0 50 123197.5 51 124340.0 52 120565.0 53 116790.0 54 113168.5 55 109547.0 56 104414.0 57 99281.0 58 100278.5 59 101276.0 60 95185.0 61 89094.0 62 79816.0 63 70538.0 64 61721.0 65 52904.0 66 44198.5 67 35493.0 68 29099.5 69 22706.0 70 19599.0 71 16492.0 72 14116.0 73 11740.0 74 10850.5 75 7814.5 76 5668.0 77 4314.5 78 2961.0 79 2415.5 80 1870.0 81 1458.5 82 1047.0 83 678.5 84 310.0 85 235.5 86 161.0 87 101.5 88 42.0 89 30.5 90 19.0 91 12.0 92 5.0 93 4.0 94 3.0 95 4.5 96 6.0 97 5.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1838121.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.214693447812596 #Duplication Level Percentage of deduplicated Percentage of total 1 79.30578115208553 15.238362734766373 2 5.904532307304551 2.269075564751251 3 2.2012665872899544 1.2688998801506721 4 1.2385210553042227 0.9519120962532795 5 0.844946218412991 0.8117691283347064 6 0.6186224563273826 0.7131984514958094 7 0.49263058446137553 0.6626021964409456 8 0.40020349632971786 0.6151829998974657 9 0.3448396784030322 0.5963389838240891 >10 5.71026195128712 27.69967115198075 >50 2.239589971760362 30.603037354611 >100 0.6962531248603703 17.571752508345632 >500 0.001417453429697453 0.1683725385984529 >1k 8.504720578184718E-4 0.25678037753254834 >5k 0.0 0.0 >10k+ 2.834906859394906E-4 0.5730440330170574 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10520 0.572323584791208 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2303 0.1252909900926 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01664743507092297 0.0 2 0.0 0.0 0.0 0.05500181979314746 0.0 3 0.0 0.0 0.0 0.08590294110126591 0.0 4 0.0 0.0 0.0 0.1292080336386995 0.0 5 0.0 0.0 0.0 0.2041758948404376 0.0 6 0.0 0.0 0.0 0.37016061510640486 0.0 7 0.0 0.0 0.0 0.46101426402287987 0.0 8 0.0 0.0 0.0 0.7039797706462197 0.0 9 0.0 0.0 0.0 0.8652313966273167 0.0 10 0.0 0.0 0.0 1.1248987417041643 0.0 11 0.0 0.0 0.0 1.2953445393420782 0.0 12 0.0 0.0 0.0 1.4448450346848765 0.0 13 0.0 0.0 0.0 1.522424258250681 0.0 14 0.0 0.0 0.0 1.5560455486880351 0.0 15 0.0 0.0 0.0 1.5932030589933959 0.0 16 0.0 0.0 0.0 1.6605000432506891 0.0 17 0.0 0.0 0.0 1.7294291289855237 0.0 18 0.0 0.0 0.0 1.8401944159280048 0.0 19 0.0 0.0 0.0 1.887198938481199 0.0 20 0.0 0.0 0.0 1.9442680868125657 0.0 21 0.0 0.0 0.0 2.0074304139934203 0.0 22 0.0 0.0 0.0 2.0742921711900357 0.0 23 0.0 0.0 0.0 2.1477911410619868 0.0 24 0.0 0.0 0.0 2.2094301735304693 0.0 25 0.0 0.0 0.0 2.2637247493500157 0.0 26 0.0 0.0 0.0 2.323350856662864 0.0 27 0.0 0.0 0.0 2.3802023914638917 0.0 28 0.0 0.0 0.0 2.4359658586132253 0.0 29 0.0 0.0 0.0 2.4904236445805252 0.0 30 0.0 0.0 0.0 2.572572752283446 0.0 31 0.0 0.0 0.0 2.641393031253111 0.0 32 0.0 0.0 0.0 2.714130353768876 0.0 33 0.0 0.0 0.0 2.779740833166043 0.0 34 0.0 0.0 0.0 2.8517709117082064 0.0 35 0.0 0.0 0.0 2.929513345421765 0.0 36 0.0 0.0 0.0 3.0129681343067185 0.0 37 0.0 0.0 0.0 3.0956068724529016 0.0 38 0.0 0.0 0.0 3.188854270203104 0.0 39 0.0 0.0 0.0 3.277694993963945 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTACGA 25 3.8917213E-5 45.0 26 GTACGTC 20 7.034392E-4 45.0 29 CGTTTTT 8570 0.0 41.849472 1 CGTTCGA 50 1.0822987E-9 40.5 14 ACATACG 130 0.0 39.80769 17 TAGGGCG 895 0.0 38.715084 5 ACCCGCT 495 0.0 38.636364 34 TACGGGA 555 0.0 38.51351 4 GGGCGAT 3985 0.0 38.281055 7 GCGATCG 100 0.0 38.25 9 GCGATAT 225 0.0 38.0 9 AATGCGT 30 1.14018825E-4 37.499996 30 AGGGCGA 2050 0.0 37.42683 6 CGGGTAC 145 0.0 37.24138 6 CGGTCTA 145 0.0 37.24138 31 ATTGGGC 650 0.0 37.038464 4 AGTACGG 280 0.0 36.964283 2 TCGGGTA 55 2.752131E-9 36.818184 5 GGCGATA 810 0.0 36.38889 8 ATGGGCG 620 0.0 36.290325 5 >>END_MODULE