##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545489_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2930305 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.02930923572802 31.0 31.0 33.0 30.0 34.0 2 31.338411189278933 31.0 31.0 34.0 30.0 34.0 3 31.38934377138216 31.0 31.0 34.0 28.0 34.0 4 35.20170425945422 37.0 35.0 37.0 32.0 37.0 5 35.08186724590102 37.0 35.0 37.0 32.0 37.0 6 35.127013740890455 37.0 35.0 37.0 32.0 37.0 7 35.73057104977127 37.0 35.0 37.0 35.0 37.0 8 35.71862246421448 37.0 35.0 37.0 35.0 37.0 9 37.3735102659962 39.0 37.0 39.0 35.0 39.0 10 36.595713415497706 39.0 35.0 39.0 32.0 39.0 11 36.31220470224089 38.0 35.0 39.0 31.0 39.0 12 35.90833309160651 37.0 35.0 39.0 31.0 39.0 13 35.75739317238308 37.0 35.0 39.0 30.0 39.0 14 36.75490025782299 39.0 35.0 41.0 31.0 41.0 15 36.907774787948696 39.0 35.0 41.0 31.0 41.0 16 36.9497775828796 38.0 35.0 41.0 31.0 41.0 17 36.858571036120814 38.0 35.0 41.0 31.0 41.0 18 36.70382298088424 38.0 35.0 40.0 31.0 41.0 19 36.5999549534946 38.0 35.0 40.0 31.0 41.0 20 36.44454997005431 38.0 35.0 40.0 31.0 41.0 21 36.32597289360664 38.0 35.0 40.0 30.0 41.0 22 36.25092575687514 38.0 35.0 40.0 30.0 41.0 23 36.15182139743133 38.0 34.0 40.0 30.0 41.0 24 36.03919694366286 38.0 34.0 40.0 30.0 41.0 25 35.91653872207842 38.0 34.0 40.0 30.0 41.0 26 35.77320040064089 38.0 34.0 40.0 29.0 41.0 27 35.67497854318919 37.0 34.0 40.0 29.0 41.0 28 35.613480166740324 37.0 34.0 40.0 29.0 41.0 29 35.55969498055663 37.0 34.0 40.0 29.0 41.0 30 35.43433226234129 37.0 34.0 40.0 27.0 41.0 31 35.262140971673595 37.0 34.0 40.0 27.0 41.0 32 35.03907238325021 37.0 34.0 40.0 26.0 41.0 33 34.76542748962992 37.0 33.0 40.0 24.0 41.0 34 34.492909441167384 37.0 33.0 40.0 23.0 41.0 35 34.27653844906929 37.0 33.0 40.0 23.0 41.0 36 34.11835423275051 37.0 33.0 40.0 22.0 41.0 37 34.06828333569373 37.0 33.0 40.0 22.0 41.0 38 33.97118456952433 37.0 33.0 40.0 22.0 41.0 39 33.87662649451166 37.0 33.0 40.0 21.0 41.0 40 33.765913104608565 37.0 33.0 40.0 21.0 41.0 41 33.645847445914335 36.0 33.0 40.0 20.0 41.0 42 33.57432656327584 36.0 32.0 40.0 20.0 41.0 43 33.509653773242036 36.0 32.0 40.0 20.0 41.0 44 33.372935581790976 36.0 32.0 40.0 19.0 41.0 45 33.29628758781082 36.0 32.0 40.0 20.0 41.0 46 33.23784554850092 36.0 32.0 40.0 20.0 41.0 47 33.129619271714034 35.0 32.0 40.0 20.0 41.0 48 33.028133931450824 35.0 31.0 39.0 19.0 41.0 49 32.97742589935177 35.0 31.0 39.0 19.0 41.0 50 32.91664894951208 35.0 31.0 39.0 18.0 41.0 51 32.76164631326773 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 2.0 12 2.0 13 9.0 14 43.0 15 115.0 16 465.0 17 1161.0 18 2614.0 19 4939.0 20 8307.0 21 12589.0 22 18306.0 23 25950.0 24 36294.0 25 49542.0 26 63655.0 27 72613.0 28 76445.0 29 83111.0 30 94024.0 31 110943.0 32 131864.0 33 162590.0 34 232227.0 35 295915.0 36 242721.0 37 292814.0 38 387370.0 39 523487.0 40 184.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.263571539481383 23.557001745552082 26.599927311320837 18.5794994036457 2 35.13272509175666 24.994804295116037 26.647396772690897 13.225073840436405 3 27.831403215706214 25.203997536092658 33.274932131638174 13.689667116562951 4 24.7785128169252 27.433151156620216 32.878215748872556 14.910120277582026 5 22.126229180921438 31.112187980432072 32.265242014056554 14.496340824589932 6 20.599391530915725 39.696106719266425 29.48256239538205 10.2219393544358 7 84.20836738837765 3.8246189389841674 10.219789407587266 1.7472242650509076 8 84.64091621861888 3.123463257237728 10.294593907460145 1.9410266166832464 9 79.19250726460216 5.501202093297455 11.997658946764927 3.3086316953354684 10 38.03720090570777 29.392230501603073 18.6262863422067 13.944282250482459 11 31.402362552703554 24.147793489073663 28.00025935866744 16.449584599555337 12 28.68970977423852 22.054461907548873 31.133823953479244 18.122004364733364 13 22.707499731256643 27.5466888259072 31.99663516255134 17.749176280284818 14 19.36197767809153 30.31090620259666 32.671343085446736 17.655773033865074 15 18.37907658076548 23.713913739354776 39.575129551360696 18.331880128519046 16 20.997882472984895 22.015182719887523 38.09705815606225 18.889876651065332 17 20.952938346008352 21.79513736624686 32.200880113162285 25.05104417458251 18 22.692620734019155 22.90945823045724 34.091297663553796 20.306623371969813 19 26.699882776707547 24.100562910686772 29.30524296958849 19.894311343017197 20 27.45267130895931 24.070088267262282 29.227606000058014 19.249634423720398 21 24.271569000496534 24.95317040376343 31.806723190930636 18.968537404809396 22 23.73299025186798 23.252152932885824 30.100689177406448 22.914167637839746 23 21.261404529562622 26.418888136217898 30.417755148354864 21.901952185864612 24 21.095449108539896 24.296208073903568 35.122282492778055 19.486060324778478 25 21.42602903110768 25.1196718430334 33.209068680563966 20.245230445294943 26 20.081970989368 28.38752280052759 30.131368577673655 21.399137632430755 27 20.280926388208737 27.08871602102853 31.509382129164027 21.120975461598707 28 19.275263155200566 26.361897481661465 34.69045031148635 19.67238905165162 29 20.544209561803292 24.162706612451604 34.37157565509392 20.92150817065118 30 20.950140002491207 26.19839914275135 32.693149689196176 20.158311165561262 31 24.660368118677066 25.6286973540297 29.727895219098354 19.98303930819488 32 25.65463322077395 25.350091543371768 29.500478619119853 19.494796616734437 33 24.921364840861276 25.939176979870698 28.646437828144165 20.49302035112386 34 21.358868786696267 26.854781328223513 30.09437584142265 21.691974043657574 35 21.994161017368498 26.173828321625226 30.81781589288487 21.014194768121406 36 25.46936240425485 26.30528221465001 28.01745893345573 20.20789644763941 37 22.417222780563797 28.73673559578269 28.73547292858593 20.11056869506758 38 22.386406875734778 28.84948836383926 27.665140659419414 21.09896410100655 39 22.14387239553562 28.19672354925511 28.002682314639603 21.65672174056967 40 24.06234163337946 26.019305157654237 28.529897058497323 21.38845615046898 41 20.83124452915311 25.46956716109757 29.142666036470604 24.55652227327872 42 22.254270459900933 26.90324044766671 27.39568065440287 23.446808438029485 43 22.0281847794001 25.97719350033529 28.785843111894494 23.208778608370118 44 21.82666992002539 27.39496400545336 29.470925381487596 21.307440693033662 45 20.911679842200726 29.254292641892228 27.912725808405607 21.921301707501435 46 22.1858134221523 28.747963095991715 27.994184905666813 21.07203857618917 47 21.573488084004907 27.695274041439372 28.73421026138917 21.997027613166548 48 22.269149457138422 26.26914263191033 29.87190753180983 21.589800379141423 49 22.162948908048822 26.017496472210233 30.01646586276855 21.803088756972397 50 20.893388230917942 28.869179146880615 28.942823357978092 21.29460926422335 51 20.841687128131714 29.30060181448689 28.17382490901118 21.68388614837022 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3015.0 1 4040.5 2 5066.0 3 27652.5 4 50239.0 5 36150.0 6 22061.0 7 22329.5 8 22598.0 9 23471.5 10 24345.0 11 24220.0 12 24095.0 13 23419.5 14 22744.0 15 21654.5 16 20565.0 17 20121.5 18 19678.0 19 18895.5 20 18113.0 21 17706.5 22 17300.0 23 18404.5 24 19509.0 25 19405.0 26 22698.5 27 26096.0 28 32870.0 29 39644.0 30 45040.0 31 50436.0 32 58053.0 33 65670.0 34 72936.5 35 80203.0 36 88288.0 37 96373.0 38 104731.0 39 113089.0 40 133655.5 41 154222.0 42 175892.0 43 197562.0 44 202452.5 45 207343.0 46 212893.5 47 218444.0 48 212091.0 49 205738.0 50 200102.5 51 194467.0 52 184222.0 53 173977.0 54 164200.5 55 154424.0 56 147363.5 57 140303.0 58 130916.0 59 121529.0 60 114683.0 61 107837.0 62 95443.0 63 83049.0 64 73380.5 65 63712.0 66 54547.0 67 45382.0 68 38826.5 69 32271.0 70 27961.5 71 23652.0 72 21387.0 73 19122.0 74 15767.0 75 9756.5 76 7101.0 77 5489.5 78 3878.0 79 2993.0 80 2108.0 81 1550.5 82 993.0 83 728.0 84 463.0 85 273.5 86 84.0 87 68.0 88 52.0 89 39.5 90 27.0 91 16.5 92 6.0 93 5.0 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2930305.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.470028904679513 #Duplication Level Percentage of deduplicated Percentage of total 1 78.77003392465903 16.124248712603563 2 5.858040267127686 2.3982850718576048 3 2.4176428146680045 1.484676548923344 4 1.475668188032265 1.2082788185094604 5 0.9816973974340597 1.0047687050561926 6 0.7492862429890642 0.9202746631118917 7 0.5896767408864158 0.84494899512535 8 0.4529044759868336 0.7416774171607371 9 0.4006379586889675 0.7380963535207465 >10 5.630095836595997 28.682018997169294 >50 2.20332201047892 31.81968356379607 >100 0.46645921905762827 12.258304212400182 >500 0.0036951227664897635 0.522289158220237 >1k 6.718405029981388E-4 0.25239449084950033 >5k 0.0 0.0 >10k+ 1.679601257495347E-4 1.0000542916958748 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29087 0.9926270473551388 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3103 0.10589341382552328 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4126140452956264E-5 0.0 0.0 0.011534635473099217 0.0 2 3.4126140452956264E-5 0.0 0.0 0.05944773666904981 0.0 3 3.4126140452956264E-5 0.0 0.0 0.1272563777490739 0.0 4 3.4126140452956264E-5 0.0 0.0 0.19588404619996894 0.0 5 3.4126140452956264E-5 0.0 0.0 0.3179191244597405 0.0 6 3.4126140452956264E-5 0.0 0.0 0.6091174809448163 0.0 7 6.825228090591253E-5 0.0 0.0 0.766200105449774 0.0 8 6.825228090591253E-5 0.0 0.0 1.0964387666130317 0.0 9 6.825228090591253E-5 0.0 0.0 1.2977829952854738 0.0 10 6.825228090591253E-5 0.0 0.0 1.558950348171948 0.0 11 6.825228090591253E-5 0.0 0.0 1.7182511718063478 0.0 12 6.825228090591253E-5 0.0 0.0 1.8504899660615532 0.0 13 6.825228090591253E-5 0.0 0.0 1.930311008581018 0.0 14 6.825228090591253E-5 0.0 0.0 1.975528144681185 0.0 15 6.825228090591253E-5 0.0 0.0 2.011497096718601 0.0 16 6.825228090591253E-5 0.0 0.0 2.068999643381832 0.0 17 6.825228090591253E-5 0.0 0.0 2.130085434792624 0.0 18 6.825228090591253E-5 0.0 0.0 2.232941622117834 0.0 19 1.0237842135886879E-4 0.0 0.0 2.2756675499649353 0.0 20 1.0237842135886879E-4 0.0 0.0 2.3304741315323834 0.0 21 1.0237842135886879E-4 0.0 0.0 2.3857243529257195 0.0 22 1.0237842135886879E-4 0.0 0.0 2.4462641260892637 0.0 23 1.0237842135886879E-4 0.0 0.0 2.515540191208765 2.730091236236501E-4 24 1.0237842135886879E-4 0.0 0.0 2.574646666473285 2.730091236236501E-4 25 1.0237842135886879E-4 0.0 0.0 2.6237883087255423 2.730091236236501E-4 26 1.0237842135886879E-4 0.0 0.0 2.6751481501072414 2.730091236236501E-4 27 1.0237842135886879E-4 0.0 0.0 2.7358926801135035 2.730091236236501E-4 28 1.0237842135886879E-4 0.0 0.0 2.7896072251864568 2.730091236236501E-4 29 1.0237842135886879E-4 0.0 0.0 2.851034278001778 2.730091236236501E-4 30 1.3650456181182505E-4 0.0 0.0 2.9402741352862587 2.730091236236501E-4 31 1.3650456181182505E-4 0.0 0.0 3.0061034602200114 2.730091236236501E-4 32 1.3650456181182505E-4 0.0 0.0 3.072512929541464 2.730091236236501E-4 33 1.706307022647813E-4 0.0 0.0 3.1426080220318364 2.730091236236501E-4 34 1.706307022647813E-4 0.0 0.0 3.2151601966348213 2.730091236236501E-4 35 1.706307022647813E-4 0.0 0.0 3.2966534200364808 2.730091236236501E-4 36 2.0475684271773758E-4 0.0 0.0 3.372959470089291 2.730091236236501E-4 37 2.0475684271773758E-4 0.0 0.0 3.4504599350579546 2.730091236236501E-4 38 2.0475684271773758E-4 0.0 0.0 3.5370720795275576 2.730091236236501E-4 39 2.0475684271773758E-4 0.0 0.0 3.6533398400507795 2.730091236236501E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 21185 0.0 43.003304 1 TAGGGCG 1345 0.0 39.312267 5 TATAGCG 145 0.0 38.793106 1 AGGGCGA 3035 0.0 38.476112 6 GGGCGAT 6035 0.0 38.14002 7 CGTAAGG 455 0.0 38.076923 2 GCGCGAC 1260 0.0 37.32143 9 CGCGACC 1285 0.0 37.120625 10 GTTTTTT 25705 0.0 36.85956 2 CTATGCG 110 0.0 36.81818 1 CGACCCG 1260 0.0 36.785713 32 TGCGTAG 190 0.0 36.710526 1 ACGGGAT 1025 0.0 36.658535 5 ATAGGGC 1590 0.0 36.650944 4 ACCCGCT 1265 0.0 36.64032 34 GGCGATA 1405 0.0 36.512455 8 TGGGCGA 1855 0.0 36.388138 6 TACGCGG 180 0.0 36.25 2 CGACGGT 225 0.0 36.0 28 ACGTATA 25 0.0021076403 36.0 10 >>END_MODULE