##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545485_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 395629 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.045249463512533 31.0 31.0 33.0 30.0 34.0 2 31.310432248394328 31.0 31.0 34.0 28.0 34.0 3 31.425666470354802 31.0 31.0 34.0 30.0 34.0 4 35.19107800489853 37.0 35.0 37.0 32.0 37.0 5 35.050565049579276 37.0 35.0 37.0 32.0 37.0 6 35.095326682321065 37.0 35.0 37.0 32.0 37.0 7 35.710180497385174 37.0 35.0 37.0 35.0 37.0 8 35.705501871703035 37.0 35.0 37.0 35.0 37.0 9 37.36343897944792 39.0 37.0 39.0 35.0 39.0 10 36.632109880721586 39.0 35.0 39.0 32.0 39.0 11 36.23462637976488 38.0 35.0 39.0 31.0 39.0 12 35.05255934221202 35.0 34.0 39.0 30.0 39.0 13 34.454716413609724 35.0 33.0 39.0 26.0 39.0 14 35.32240305943194 37.0 33.0 40.0 26.0 41.0 15 35.80490055076852 37.0 34.0 40.0 30.0 41.0 16 36.03504040401487 37.0 34.0 40.0 31.0 41.0 17 35.98488735658913 36.0 34.0 40.0 31.0 41.0 18 35.927967868887265 36.0 34.0 40.0 30.0 41.0 19 35.825960685389596 36.0 34.0 40.0 30.0 41.0 20 35.669008085858216 36.0 34.0 40.0 30.0 41.0 21 35.49732956886376 35.0 34.0 40.0 30.0 41.0 22 35.35661187627803 35.0 34.0 40.0 29.0 41.0 23 35.347360784977845 35.0 34.0 40.0 29.0 41.0 24 35.254827123390854 35.0 34.0 40.0 29.0 41.0 25 35.15408375018009 35.0 34.0 40.0 29.0 41.0 26 34.935017402667654 35.0 34.0 40.0 29.0 41.0 27 34.859598259985994 35.0 34.0 40.0 28.0 41.0 28 34.880451129720015 35.0 34.0 40.0 28.0 41.0 29 34.91461950463692 36.0 34.0 40.0 29.0 41.0 30 34.854831167583775 36.0 34.0 40.0 28.0 41.0 31 34.65032391457653 35.0 33.0 40.0 27.0 41.0 32 34.455646577980886 35.0 33.0 40.0 26.0 41.0 33 34.25947036238496 35.0 33.0 40.0 25.0 41.0 34 34.13965356432415 35.0 33.0 40.0 25.0 41.0 35 33.95843075204295 35.0 33.0 39.0 24.0 41.0 36 33.71006169921821 35.0 33.0 39.0 23.0 41.0 37 33.620043020102166 35.0 33.0 39.0 23.0 41.0 38 33.61298843108063 35.0 33.0 39.0 23.0 41.0 39 33.57523589019005 35.0 33.0 39.0 23.0 41.0 40 33.437806631970865 35.0 32.0 39.0 23.0 41.0 41 33.41167609047871 35.0 32.0 39.0 23.0 41.0 42 33.365860439957636 35.0 32.0 39.0 23.0 41.0 43 33.234371090086924 35.0 32.0 39.0 23.0 41.0 44 33.1325812819586 35.0 32.0 39.0 23.0 41.0 45 33.03346822401796 35.0 32.0 38.0 23.0 41.0 46 32.9828526220272 35.0 32.0 38.0 23.0 40.0 47 32.92431292953752 35.0 32.0 38.0 23.0 40.0 48 32.90078078199525 35.0 32.0 38.0 23.0 40.0 49 32.89124406957023 35.0 32.0 38.0 22.0 40.0 50 32.78717182006375 35.0 32.0 38.0 22.0 40.0 51 32.59994338129915 35.0 31.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 7.0 15 13.0 16 64.0 17 158.0 18 343.0 19 686.0 20 1146.0 21 1795.0 22 2594.0 23 3631.0 24 4836.0 25 6187.0 26 7929.0 27 9533.0 28 10532.0 29 11884.0 30 13826.0 31 16778.0 32 20667.0 33 26343.0 34 44371.0 35 62815.0 36 26725.0 37 30718.0 38 39583.0 39 52435.0 40 28.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.410341506815726 24.37182309689128 27.37210871801612 14.845726678276872 2 30.004625545650093 26.292309208880038 30.312995255656183 13.390069989813687 3 28.86795457360305 25.971301396004844 31.331879108963197 13.828864921428915 4 25.215037320317773 28.657151017746425 31.16328681668937 14.96452484524643 5 22.909594594936163 33.18184460694236 29.962919806182054 13.945640991939417 6 20.962315704864913 41.69891489248766 26.841055635456453 10.497713767190978 7 86.97264356252954 4.853031501735212 6.483599533906766 1.6907254018284807 8 88.05219030960825 3.958253818602782 6.0551678466442045 1.9343880251447694 9 83.53331024773209 5.534225246379815 8.172302839276192 2.7601616666119018 10 55.32683397829785 21.74562532069186 12.312545339194044 10.614995361816247 11 51.77097735504728 19.400751714358655 17.06952725912408 11.758743671469988 12 45.254013229566084 21.09223540235928 20.50633295334771 13.147418414726927 13 20.51012438420844 44.3079248487851 21.772670860831738 13.409279906174723 14 15.277949796400161 45.28889439348481 25.88055981740469 13.552595992710343 15 13.894835818405626 21.820695651734326 50.674748312181364 13.609720217678683 16 15.142216571586006 17.022260754393635 49.290623285957295 18.54489938806306 17 15.97304545420078 17.123112815289073 27.900128655887208 39.003713074622944 18 21.19713165617283 20.92237929979855 36.318368976996126 21.5621200670325 19 31.469381668179025 22.39016856701607 24.985023848100113 21.155425916704793 20 33.21950615349228 21.93266924315457 23.998493538138003 20.84933106521514 21 22.636106048848795 28.98574169234308 27.312962396588723 21.065189862219402 22 24.172393833616848 24.661235652593717 23.57006185087544 27.596308662913994 23 19.153297660181636 31.53535256515574 22.748837926441187 26.562511848221437 24 19.45206241200721 22.82314997131151 40.45203966342205 17.27274795325924 25 17.717861936309017 24.04146308789295 37.82508360105048 20.415591374747557 26 15.786507055852834 35.664473534548776 26.89084976076071 21.658169648837674 27 18.10307131175925 35.03964572870038 27.002823352180954 19.85445960735942 28 15.630805628505492 28.83231512351218 38.6890243131823 16.847854934800026 29 15.985936319127264 24.298016576135723 37.60315851466905 22.112888590067968 30 18.406638542675083 32.35758753781952 30.18029517553061 19.055478743974785 31 31.36347436613595 26.313035697585363 22.763498125769345 19.55999181050934 32 32.9391930318556 24.59450646944486 25.735474396467396 16.73082610223214 33 29.962161520009907 26.07114240867075 23.081725556013335 20.884970515306005 34 20.030634761354705 27.630431540660567 26.934830358745188 25.40410333923954 35 20.843012013780587 24.0773553000412 32.05907554805133 23.020557138126883 36 33.10348836915393 24.07710253798382 23.95476570221091 18.86464339065134 37 21.14784305498333 33.04459480978391 27.515172042494356 18.292390092738398 38 21.579307886934476 34.40217981998286 22.040598641656704 21.977913651425958 39 20.66481476332625 32.99454792242227 25.567134866250957 20.773502448000524 40 25.680372267958113 25.44631460282234 23.636791034024302 25.236522095195248 41 17.700168592292272 23.285704536320644 26.654011712993743 32.36011515839334 42 22.303218419276647 24.458267720515938 23.16134560408868 30.077168256118735 43 21.34929441471682 25.491053486978966 26.28169320246999 26.87795889583423 44 19.817303584924257 29.07092250568083 28.242621243639874 22.86915266575504 45 16.897396298046907 37.92745223429021 23.259922806467674 21.91522866119521 46 22.869658189869803 32.81837276842698 25.224389516440908 19.087579525262306 47 22.00066223659034 26.73590661958552 26.459890452924327 24.80354069089981 48 23.444691870413948 23.809680281273618 30.872357688642644 21.87327015966979 49 21.713524539404343 23.197996102409075 32.74203862709761 22.346440731088972 50 20.703992882220465 33.61027629420492 25.04138978689631 20.644341036678302 51 19.20486111988757 35.36495049655106 22.807984247868585 22.622204135692783 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 626.0 1 693.5 2 761.0 3 1778.0 4 2795.0 5 2073.0 6 1351.0 7 1529.5 8 1708.0 9 1872.5 10 2037.0 11 2124.0 12 2211.0 13 2141.0 14 2071.0 15 2038.5 16 2006.0 17 1904.0 18 1802.0 19 1802.0 20 1802.0 21 1709.5 22 1617.0 23 1619.0 24 1621.0 25 1744.5 26 2267.5 27 2667.0 28 2894.5 29 3122.0 30 3454.0 31 3786.0 32 4572.5 33 5359.0 34 6416.5 35 7474.0 36 8196.0 37 8918.0 38 11318.0 39 13718.0 40 20874.5 41 28031.0 42 34808.5 43 41586.0 44 42092.0 45 42598.0 46 39126.5 47 35655.0 48 33531.0 49 31407.0 50 29285.5 51 27164.0 52 25075.0 53 22986.0 54 21237.0 55 19488.0 56 18102.0 57 16716.0 58 15660.0 59 14604.0 60 13106.0 61 11608.0 62 10855.5 63 10103.0 64 8681.5 65 7260.0 66 6319.0 67 5378.0 68 4485.0 69 3592.0 70 3445.5 71 3299.0 72 2548.5 73 1798.0 74 1540.5 75 1085.5 76 888.0 77 683.5 78 479.0 79 366.0 80 253.0 81 167.5 82 82.0 83 52.0 84 22.0 85 23.0 86 24.0 87 13.5 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 395629.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.124947867825664 #Duplication Level Percentage of deduplicated Percentage of total 1 76.68462875318345 17.733280421809322 2 5.447649444195477 2.5195321879841974 3 2.1401479959339373 1.4847243250621163 4 1.2908655685382944 1.1940479590727677 5 1.0143295915355943 1.1728159462526762 6 0.7345145318016374 1.0191366153643944 7 0.698444621757807 1.1306046826698752 8 0.6525374635202046 1.207191586056634 9 0.5377695679261988 1.1192303900876832 >10 9.735596629102952 54.55565694122524 >50 1.0077714260730797 14.438021479719637 >100 0.05355835127720273 1.7129684628781006 >500 0.0 0.0 >1k 0.00218605515417154 0.7127890018173592 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1643 0.4152880602786954 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1177 0.29750094153866374 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 481 0.12157854960076232 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02123201282009155 0.0 2 0.0 0.0 0.0 0.07254271046864613 0.0 3 0.0 0.0 0.0 0.10262139529710916 0.0 4 0.0 0.0 0.0 0.19058259126605986 0.0 5 0.0 0.0 0.0 0.30457827914536095 0.0 6 0.0 0.0 0.0 0.5482409024616497 0.0 7 0.0 0.0 0.0 0.6614783041688046 0.0 8 0.0 0.0 0.0 1.04087415229925 0.0 9 0.0 0.0 0.0 1.190003766154655 0.0 10 0.0 0.0 0.0 1.435182961815236 0.0 11 0.0 0.0 0.0 1.5618167525636393 0.0 12 0.0 0.0 0.0 1.6909781638858628 0.0 13 0.0 0.0 0.0 1.746080292395148 0.0 14 0.0 0.0 0.0 1.7746424048793188 0.0 15 0.0 0.0 0.0 1.8026989932487254 0.0 16 0.0 0.0 0.0 1.8676588419959104 0.0 17 0.0 0.0 0.0 1.9217499222756673 0.0 18 0.0 0.0 0.0 2.0448450442207218 0.0 19 0.0 0.0 0.0 2.0794734460820616 0.0 20 0.0 0.0 0.0 2.122695757894391 0.0 21 0.0 0.0 0.0 2.1740064555429455 0.0 22 0.0 0.0 0.0 2.22405334290459 0.0 23 0.0 0.0 0.0 2.294321194856798 0.0 24 0.0 0.0 0.0 2.3395656031281833 0.0 25 0.0 0.0 0.0 2.3769743876207254 0.0 26 0.0 0.0 0.0 2.420702223547819 0.0 27 0.0 0.0 0.0 2.4608913906715637 0.0 28 0.0 0.0 0.0 2.5008277957379264 0.0 29 0.0 0.0 0.0 2.5448083937224015 0.0 30 0.0 0.0 0.0 2.625186727969891 0.0 31 0.0 0.0 0.0 2.6873661940858735 0.0 32 0.0 0.0 0.0 2.738171367619664 0.0 33 0.0 0.0 0.0 2.786196158522252 0.0 34 0.0 0.0 0.0 2.8364958079412785 0.0 35 0.0 0.0 0.0 2.919149000705206 0.0 36 0.0 0.0 0.0 2.983603325337627 0.0 37 2.527620573820423E-4 0.0 0.0 3.044518981166699 0.0 38 2.527620573820423E-4 0.0 0.0 3.098104537331692 0.0 39 2.527620573820423E-4 0.0 0.0 3.1620533378493487 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTGCG 20 7.0276705E-4 45.000004 1 CACGGCA 20 7.0276705E-4 45.000004 35 CGACGGT 40 6.7957444E-9 45.000004 28 GGCGTAG 20 7.0276705E-4 45.000004 1 TCGATAG 30 2.161878E-6 45.000004 1 GTTGTAC 20 7.0276705E-4 45.000004 44 CTACGAA 30 2.161878E-6 45.000004 11 TACGAAT 30 2.161878E-6 45.000004 12 GGAACTA 30 2.161878E-6 45.000004 8 TATTACG 20 7.0276705E-4 45.000004 1 GTGTACG 20 7.0276705E-4 45.000004 1 CGAATAT 30 2.161878E-6 45.000004 14 AATTCGC 55 1.8189894E-12 45.000004 13 TCGTAAG 20 7.0276705E-4 45.000004 1 TGCTACG 20 7.0276705E-4 45.000004 1 ACCCGCT 120 0.0 45.000004 34 TTGCACG 20 7.0276705E-4 45.000004 1 GCTAATT 20 7.0276705E-4 45.000004 20 CAATACG 20 7.0276705E-4 45.000004 1 ATCGCGG 40 6.7957444E-9 45.000004 2 >>END_MODULE