##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545483_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3186802 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.024845911355648 31.0 31.0 33.0 30.0 34.0 2 31.32256318403214 31.0 31.0 34.0 30.0 34.0 3 31.39297797603993 31.0 31.0 34.0 28.0 34.0 4 35.20544891085169 37.0 35.0 37.0 32.0 37.0 5 35.088671966441595 37.0 35.0 37.0 32.0 37.0 6 35.13221185376437 37.0 35.0 37.0 32.0 37.0 7 35.71773552294746 37.0 35.0 37.0 35.0 37.0 8 35.7039539952592 37.0 35.0 37.0 35.0 37.0 9 37.35847567561461 39.0 37.0 39.0 35.0 39.0 10 36.5847928424797 39.0 35.0 39.0 32.0 39.0 11 36.302652941726535 38.0 35.0 39.0 32.0 39.0 12 35.75943469346385 37.0 35.0 39.0 30.0 39.0 13 35.54578226071152 37.0 35.0 39.0 30.0 39.0 14 36.513321819177975 38.0 35.0 40.0 30.0 41.0 15 36.70661151838112 38.0 35.0 40.0 31.0 41.0 16 36.748866732228734 38.0 35.0 40.0 31.0 41.0 17 36.64618354074084 38.0 35.0 40.0 31.0 41.0 18 36.510582395768544 38.0 35.0 40.0 31.0 41.0 19 36.39997370404562 38.0 35.0 40.0 30.0 41.0 20 36.25701377117248 38.0 35.0 40.0 30.0 41.0 21 36.136365233861405 38.0 34.0 40.0 30.0 41.0 22 36.0267104765216 38.0 34.0 40.0 30.0 41.0 23 35.960443416315165 37.0 34.0 40.0 30.0 41.0 24 35.84366709949347 37.0 34.0 40.0 30.0 41.0 25 35.71767558825431 37.0 34.0 40.0 29.0 41.0 26 35.56992935237269 37.0 34.0 40.0 29.0 41.0 27 35.46154734432827 37.0 34.0 40.0 29.0 41.0 28 35.41043999595833 37.0 34.0 40.0 28.0 41.0 29 35.3441864289027 37.0 34.0 40.0 28.0 41.0 30 35.198992281290145 37.0 34.0 40.0 27.0 41.0 31 35.03291073621769 37.0 34.0 40.0 27.0 41.0 32 34.80265607966858 37.0 33.0 40.0 25.0 41.0 33 34.52357975173857 37.0 33.0 40.0 24.0 41.0 34 34.25875752556952 37.0 33.0 40.0 23.0 41.0 35 34.02801397764907 36.0 33.0 40.0 23.0 41.0 36 33.848764372559074 36.0 33.0 40.0 21.0 41.0 37 33.78322876664443 36.0 33.0 40.0 22.0 41.0 38 33.67884230021194 36.0 33.0 40.0 21.0 41.0 39 33.57693449420454 36.0 32.0 40.0 21.0 41.0 40 33.47231487867775 36.0 32.0 40.0 21.0 41.0 41 33.36317003692103 35.0 32.0 40.0 20.0 41.0 42 33.30633060980883 35.0 32.0 40.0 20.0 41.0 43 33.22965436823499 35.0 32.0 40.0 20.0 41.0 44 33.09900489581719 35.0 32.0 40.0 19.0 41.0 45 33.01907492213197 35.0 31.0 39.0 20.0 41.0 46 32.93911984491035 35.0 31.0 39.0 20.0 41.0 47 32.819597201206726 35.0 31.0 39.0 20.0 41.0 48 32.71285100235283 35.0 31.0 39.0 19.0 41.0 49 32.672250111553836 35.0 31.0 39.0 18.0 41.0 50 32.62225547743474 35.0 31.0 39.0 18.0 41.0 51 32.46667442784334 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 10.0 13 7.0 14 56.0 15 177.0 16 538.0 17 1421.0 18 3171.0 19 5780.0 20 9749.0 21 14688.0 22 21000.0 23 29730.0 24 40868.0 25 56156.0 26 71202.0 27 79760.0 28 85084.0 29 93582.0 30 107124.0 31 125454.0 32 150694.0 33 186346.0 34 273544.0 35 346604.0 36 263546.0 37 314576.0 38 401671.0 39 504065.0 40 194.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.28029290806269 23.580065532781767 26.12455998207607 19.015081577079467 2 33.6440105158714 25.25679348764059 27.93910635175954 13.160089644728476 3 28.324477014888277 25.77220046931061 33.11219209728122 12.791130418519883 4 25.417707155951323 27.846882234917636 32.551316335310446 14.184094273820588 5 22.566635768397283 31.209595073682017 31.628353440220007 14.595415717700691 6 20.688702969309045 39.42168355611676 29.114673581854163 10.774939892720036 7 84.52759223823759 3.901058176818014 9.821884133372578 1.7494654515718264 8 85.05941065682775 3.2137861090836517 9.737347974552545 1.9894552595360488 9 79.90097910067836 5.238668734361282 11.746729166104453 3.1136229988559063 10 41.36033553386749 27.35193463541193 18.180702786053228 13.10702704466735 11 36.091793591192676 24.636485103247708 24.877855605713815 14.3938656998458 12 32.042342134842386 21.262569811365754 28.910958383984948 17.784129669806912 13 23.12923739849542 28.94393815492773 29.762784132807752 18.1640403137691 14 19.643391713699188 31.271004599595457 31.42714859599059 17.658455090714767 15 19.9623949024759 22.651830895047762 39.43900499623133 17.946769206245005 16 21.993898585478483 20.416674773016965 38.37348539382114 19.215941247683414 17 21.872271951630506 20.621739285967564 31.111063693320133 26.394925069081793 18 23.806248395727128 21.868067109283853 33.606951420263954 20.71873307472507 19 28.54654917374848 23.73244399871721 27.85645295816935 19.86455386936496 20 29.526465717041724 23.64166333521819 27.466783314432462 19.365087633307624 21 25.681043252765622 25.46028902956632 29.715746381482127 19.142921336185932 22 24.80122706085913 23.23941054386184 28.588315182430534 23.37104721284849 23 22.858119205397763 26.219608246762743 28.454638851111554 22.467633696727944 24 22.2278635447072 23.788550402566585 34.37169927720643 19.611886775519785 25 22.53086322903023 24.387269745657246 32.138206264461985 20.943660760850534 26 20.92075378388742 28.06387092765726 28.686846562792418 22.328528725662906 27 20.746409723603787 26.93461972221682 30.093868398475966 22.22510215570343 28 19.581134943432318 26.60890133745366 33.772979934115774 20.036983784998252 29 20.97183948045721 23.903210805064138 33.64096671208315 21.483983002395505 30 22.369949560719494 25.56861078912339 31.99746956353109 20.06397008662603 31 26.700592004147104 25.24524586089754 27.6604570977425 20.393705037212857 32 27.979648563042197 24.194443206700637 27.80508484681508 20.020823383442085 33 26.748163205621182 25.07633044035996 26.399286808530935 21.776219545487923 34 22.677028569707186 26.47167913161847 28.687191736417887 22.164100562256454 35 22.663190245267824 25.85595214261821 29.885979737680596 21.594877874433365 36 27.49609169317705 26.499638195281666 25.68609533946571 20.31817477207558 37 23.328308442131014 28.943310566517784 27.41350105842785 20.31487993292335 38 24.13479092833505 29.150759915426182 25.51332025020695 21.201128906031816 39 23.22805119364178 27.958404695365445 26.334958996511237 22.47858511448154 40 25.277943217055842 25.566822162155038 26.790368526190207 22.364866094598913 41 20.59742023508207 25.222087848570446 28.203321072347766 25.97717084399972 42 23.138117774496187 26.077992922057913 25.867970460668722 24.91591884277718 43 22.514043859643618 25.971553927730685 27.00741997777082 24.50698223485488 44 21.87741817659208 26.978111599026235 28.372362010567333 22.772108213814352 45 21.154153913547187 29.48620592054354 26.278130865990416 23.081509299918853 46 23.19510280211949 28.581066536295634 26.652393214263075 21.5714374473218 47 22.27182611282408 27.200403413829914 27.871923012474575 22.65584746087143 48 23.392636254150712 25.648471414289308 29.11162977806591 21.84726255349407 49 22.72758081612852 25.457370743460057 29.31408979911523 22.500958641296194 50 21.872146433948515 28.554017475826864 27.556465698214073 22.017370392010548 51 21.625629706520833 29.27106861361327 26.312742366799068 22.79055931306683 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3525.0 1 4374.0 2 5223.0 3 26805.5 4 48388.0 5 35018.5 6 21649.0 7 22160.5 8 22672.0 9 23211.0 10 23750.0 11 24013.5 12 24277.0 13 23889.5 14 23502.0 15 22685.0 16 21868.0 17 21518.5 18 21169.0 19 20252.0 20 19335.0 21 18881.0 22 18427.0 23 18454.0 24 18481.0 25 19403.0 26 22849.5 27 25374.0 28 29140.0 29 32906.0 30 38306.5 31 43707.0 32 52215.5 33 60724.0 34 68800.5 35 76877.0 36 82294.0 37 87711.0 38 98646.5 39 109582.0 40 135164.0 41 160746.0 42 185806.0 43 210866.0 44 212513.0 45 214160.0 46 211161.5 47 208163.0 48 210442.0 49 212721.0 50 211302.0 51 209883.0 52 204698.5 53 199514.0 54 187527.5 55 175541.0 56 167114.5 57 158688.0 58 153314.5 59 147941.0 60 140748.5 61 133556.0 62 123889.0 63 114222.0 64 101595.0 65 88968.0 66 76812.5 67 64657.0 68 56903.5 69 49150.0 70 42717.0 71 36284.0 72 32233.0 73 28182.0 74 23078.0 75 15288.0 76 12602.0 77 9799.5 78 6997.0 79 5519.5 80 4042.0 81 2817.5 82 1593.0 83 1054.0 84 515.0 85 369.0 86 223.0 87 145.5 88 68.0 89 53.5 90 39.0 91 29.5 92 20.0 93 13.0 94 6.0 95 5.0 96 4.0 97 4.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3186802.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.440696268808964 #Duplication Level Percentage of deduplicated Percentage of total 1 80.26151716083895 15.603397771976683 2 5.863144380519861 2.279672181637214 3 2.2384587267042906 1.305515886483689 4 1.3063516702810438 1.0158554416874017 5 0.9351488933779002 0.9089972801136288 6 0.6645709063329539 0.7751832683463628 7 0.5253275608958562 0.7148913487107409 8 0.42888305538491006 0.6670228171661448 9 0.34153616921623553 0.5975730837490839 >10 4.521339376614091 21.611830830563814 >50 1.9614586821288051 27.509112370794654 >100 0.9469010742876859 25.307256157699886 >500 0.004387371887055265 0.5413614114714846 >1k 8.124762753806046E-4 0.31211126482688145 >5k 0.0 0.0 >10k+ 1.6249525507612092E-4 0.8502188847723368 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26914 0.8445457232674011 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01622316039716305 0.0 2 0.0 0.0 0.0 0.058553998648174566 0.0 3 0.0 0.0 0.0 0.10502692040484474 0.0 4 0.0 0.0 0.0 0.15319433086837525 0.0 5 0.0 0.0 0.0 0.2544557208135303 0.0 6 0.0 0.0 0.0 0.4977403679299812 0.0 7 0.0 0.0 0.0 0.6366570624720331 0.0 8 0.0 0.0 0.0 0.9352950073459223 0.0 9 0.0 0.0 0.0 1.1117414888028814 0.0 10 0.0 0.0 0.0 1.3473381778974658 0.0 11 3.137942049741402E-5 0.0 0.0 1.486945219690461 0.0 12 3.137942049741402E-5 0.0 0.0 1.6143456669099618 0.0 13 3.137942049741402E-5 0.0 0.0 1.6847297070856615 0.0 14 3.137942049741402E-5 0.0 0.0 1.7194039667353038 0.0 15 3.137942049741402E-5 0.0 0.0 1.7481161364904378 0.0 16 3.137942049741402E-5 0.0 0.0 1.7948400936110873 0.0 17 3.137942049741402E-5 0.0 0.0 1.8451099252479446 0.0 18 3.137942049741402E-5 0.0 0.0 1.9301795342164338 0.0 19 3.137942049741402E-5 0.0 0.0 1.966956215039403 0.0 20 6.275884099482804E-5 0.0 0.0 2.0074356674810674 0.0 21 6.275884099482804E-5 0.0 0.0 2.0528730683613228 0.0 22 9.413826149224207E-5 0.0 0.0 2.1024839321677344 0.0 23 9.413826149224207E-5 0.0 0.0 2.157429297458706 0.0 24 9.413826149224207E-5 0.0 0.0 2.204780842989304 0.0 25 9.413826149224207E-5 0.0 0.0 2.248680652265186 0.0 26 9.413826149224207E-5 0.0 0.0 2.2917332171876383 0.0 27 2.1965594348189815E-4 0.0 0.0 2.3412499427325577 0.0 28 2.1965594348189815E-4 0.0 0.0 2.390170459288026 0.0 29 2.1965594348189815E-4 0.0 0.0 2.445868930670936 0.0 30 2.1965594348189815E-4 0.0 0.0 2.5366495941699547 0.0 31 2.1965594348189815E-4 0.0 0.0 2.596458769638026 0.0 32 2.1965594348189815E-4 0.0 0.0 2.6621045173186157 0.0 33 2.1965594348189815E-4 0.0 0.0 2.7244554258469775 0.0 34 2.1965594348189815E-4 0.0 0.0 2.785959090021909 0.0 35 2.1965594348189815E-4 0.0 0.0 2.856280371356614 0.0 36 2.5103536397931217E-4 0.0 0.0 2.921173012945266 0.0 37 2.5103536397931217E-4 0.0 0.0 2.988827043537691 0.0 38 2.5103536397931217E-4 0.0 0.0 3.0636042025830283 0.0 39 2.5103536397931217E-4 0.0 0.0 3.1768525311581954 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 150 0.0 43.500004 1 CGTTTTT 22270 0.0 42.65604 1 CTAAGCG 90 0.0 40.0 1 AACGGGA 1035 0.0 38.913044 4 GTTGATC 2230 0.0 38.441704 16 ATAACGC 370 0.0 38.31081 11 AGGGTAC 1590 0.0 38.207546 6 TTGATCC 2250 0.0 38.1 17 CGTTCGA 220 0.0 37.840908 14 GCGATAT 435 0.0 37.75862 9 GGTACGA 60 1.5643309E-10 37.500004 8 CATATGC 2295 0.0 37.352943 33 GCCAGTA 2290 0.0 37.336243 25 AACACGT 1465 0.0 37.32082 41 GTTTTTT 26750 0.0 37.244858 2 CGTTAGG 375 0.0 37.2 2 GGGCGAT 6910 0.0 37.087555 7 ATCCTGC 2320 0.0 37.047417 20 ACGGGTA 280 0.0 36.964283 5 GGCGATA 1620 0.0 36.944443 8 >>END_MODULE