SRR1545481_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545481_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1412973
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8226	0.5821767294916463	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	6799	0.4811839999773527	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATACGA	35	1.2121927E-7	45.000004	9
TACCCGC	25	3.8912607E-5	45.000004	24
ACCGGAT	25	3.8912607E-5	45.000004	11
TACCAGA	30	2.1658561E-6	45.000004	27
GACACGC	30	2.1658561E-6	45.000004	35
CTATATG	70	0.0	45.000004	1
TTAGATC	35	1.2121927E-7	45.000004	42
CTATACG	30	2.1658561E-6	45.000004	1
CACGCTA	30	2.1658561E-6	45.000004	37
ACCGACA	35	1.2121927E-7	45.000004	13
TTCGTCA	25	3.8912607E-5	45.000004	34
CGCGATA	25	3.8912607E-5	45.000004	11
TCGATTG	25	3.8912607E-5	45.000004	1
AGGCGAT	30	2.1658561E-6	45.000004	6
TGACCGG	60	0.0	45.000004	2
CGTAGGT	25	3.8912607E-5	45.000004	16
TACGACT	30	2.1658561E-6	45.000004	32
CTCATAG	25	3.8912607E-5	45.000004	25
ATAAGTC	25	3.8912607E-5	45.000004	12
TACCTGC	25	3.8912607E-5	45.000004	40