##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545481_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1412973 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.932811171904913 31.0 31.0 33.0 28.0 34.0 2 31.214855485561294 31.0 31.0 34.0 28.0 34.0 3 31.29171682686081 31.0 31.0 34.0 28.0 34.0 4 35.105928421845285 35.0 35.0 37.0 32.0 37.0 5 34.960610712306604 35.0 35.0 37.0 32.0 37.0 6 34.99466656475389 37.0 35.0 37.0 32.0 37.0 7 35.57429759804327 37.0 35.0 37.0 35.0 37.0 8 35.5253221399135 37.0 35.0 37.0 35.0 37.0 9 37.27926577507143 39.0 37.0 39.0 35.0 39.0 10 36.681334321321074 39.0 37.0 39.0 32.0 39.0 11 36.218389169502885 38.0 35.0 39.0 32.0 39.0 12 34.79734715383804 35.0 33.0 39.0 30.0 39.0 13 34.00586352322373 35.0 33.0 39.0 25.0 39.0 14 34.849837187264015 35.0 33.0 40.0 25.0 41.0 15 35.45341772277319 35.0 33.0 40.0 30.0 41.0 16 35.70707083574845 35.0 34.0 40.0 31.0 41.0 17 35.651340117610175 35.0 34.0 40.0 31.0 41.0 18 35.619793159529586 36.0 34.0 39.0 30.0 41.0 19 35.46805282195768 36.0 34.0 39.0 30.0 41.0 20 35.249389054143286 35.0 34.0 39.0 30.0 41.0 21 34.987505776826595 35.0 34.0 39.0 29.0 41.0 22 34.872023740014846 35.0 33.0 39.0 29.0 41.0 23 34.929077908778154 35.0 34.0 39.0 29.0 41.0 24 34.829260714819036 35.0 34.0 39.0 29.0 41.0 25 34.70983946614691 35.0 34.0 39.0 29.0 41.0 26 34.51781244227597 35.0 34.0 39.0 28.0 41.0 27 34.354601963377924 35.0 33.0 39.0 27.0 41.0 28 34.47624547673593 35.0 33.0 39.0 27.0 41.0 29 34.61810169054893 35.0 34.0 39.0 29.0 41.0 30 34.53180917115897 35.0 34.0 39.0 28.0 41.0 31 34.250957378520326 35.0 33.0 39.0 27.0 41.0 32 33.911679133288466 35.0 33.0 39.0 24.0 41.0 33 33.60361662961713 35.0 33.0 39.0 23.0 41.0 34 33.41914318249535 35.0 33.0 39.0 23.0 41.0 35 33.18916355797315 35.0 32.0 38.0 23.0 41.0 36 32.91705927855663 35.0 32.0 38.0 21.0 41.0 37 32.86519841497325 35.0 32.0 38.0 21.0 41.0 38 32.92929376569828 35.0 32.0 38.0 23.0 41.0 39 32.90273841042964 35.0 32.0 38.0 22.0 41.0 40 32.655512171853246 35.0 31.0 38.0 20.0 41.0 41 32.68906624542719 35.0 32.0 38.0 20.0 40.0 42 32.657602091476626 35.0 32.0 38.0 21.0 40.0 43 32.46820073702753 35.0 31.0 38.0 20.0 40.0 44 32.39766931144474 35.0 31.0 38.0 19.0 40.0 45 32.35684758307484 35.0 31.0 38.0 20.0 40.0 46 32.32463819195413 35.0 31.0 38.0 20.0 40.0 47 32.255479757928846 35.0 31.0 38.0 20.0 40.0 48 32.269745423302496 35.0 31.0 37.0 20.0 40.0 49 32.33839712436119 35.0 31.0 37.0 19.0 40.0 50 32.165340031267405 35.0 31.0 37.0 18.0 40.0 51 31.97166258661701 35.0 31.0 37.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 4.0 13 6.0 14 18.0 15 84.0 16 217.0 17 616.0 18 1364.0 19 2775.0 20 4601.0 21 7084.0 22 10299.0 23 14411.0 24 19961.0 25 27575.0 26 34968.0 27 40087.0 28 42639.0 29 46209.0 30 53408.0 31 63282.0 32 77480.0 33 99997.0 34 173529.0 35 243222.0 36 81766.0 37 92768.0 38 119694.0 39 154831.0 40 75.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.6682951478903 24.284894332729642 28.517388513439396 17.529422005940663 2 30.314308907530435 26.45591953986382 30.017275630886083 13.212495921719663 3 26.91219152807591 25.12001290895155 33.790242276391695 14.177553286580846 4 23.671365270249325 28.36069762125674 32.81506440675087 15.152872701743062 5 22.044582592873326 31.76607054770332 32.406705577530495 13.782641281892861 6 20.80372377957682 38.63251456326483 30.373899572037118 10.18986208512123 7 84.4379899686689 5.3064708242832666 8.554798994743706 1.7007402123041278 8 86.74829596885432 3.6297225778553446 8.111619967260522 1.510361486029811 9 83.95383351274228 4.203123485020591 9.620424452555003 2.2226185496821245 10 62.522001481981604 15.404469866020086 13.166776718309551 8.906751933688755 11 57.49635697214314 15.754582713187018 17.37888834393863 9.370171970731217 12 49.47214136434312 19.513748670356758 20.657578028737987 10.356531936562128 13 19.00807729517832 49.258053763235395 21.56672491264872 10.167144028937566 14 11.993010482153586 49.45933149465701 27.98114330563995 10.56651471754945 15 10.878622592222214 19.9052635825313 58.57224448025546 10.643869344991023 16 12.051398009728425 14.237002405566134 56.34665347462408 17.364946110081366 17 12.493515445801158 14.242310362618394 30.160661244057742 43.1035129475227 18 20.562459438361525 20.086795713718523 39.03599007199713 20.314754775922825 19 32.10684139045827 20.404423863725636 26.942977678979002 20.545757066837087 20 34.522244940278405 20.15042042558492 25.653356433562426 19.67397820057425 21 20.332660284379106 29.322924075690054 30.262290928418306 20.082124711512535 22 21.840898587588015 24.67124283337332 24.82991536285548 28.657943216183185 23 17.07838720202014 31.778172689782462 24.247101678517566 26.896338429679833 24 18.36800844743672 21.768498053395216 45.05769041588197 14.805803083286092 25 14.256606460279142 22.713455954218517 43.47875012473699 19.55118746076535 26 13.906847476915695 36.20805210007552 29.990028118017825 19.895072304990965 27 16.183111779205973 37.885508074110405 29.590657429405944 16.340722717277682 28 12.642209016025078 29.156254224249157 43.53699610679043 14.664540652935335 29 12.487712079424023 23.479358770478985 42.42260821685907 21.61032093323793 30 15.624573151787047 32.93559041821747 34.34382681056184 17.096009619433634 31 32.28455179256787 26.018685424279163 24.98653548227744 16.71022730087553 32 34.18954219224288 24.03301407740983 27.448436735875347 14.329006994471941 33 31.900326474745093 25.560431798767564 24.265573369059425 18.27366835742792 34 18.829588392701062 26.332987254533524 29.308344886986514 25.529079465778892 35 19.116784255608565 24.227002214479683 33.918057882210064 22.738155647701692 36 35.35877897171425 22.3059463981265 25.7766425826962 16.558632047463046 37 19.768176745061652 34.25118526680977 29.980403022563063 16.000234965565514 38 19.473478969520293 35.759635888300764 23.008436820802665 21.758448321376274 39 20.642220339666785 34.4259232129701 26.86916168957227 18.062694757790844 40 26.15357830616721 24.96056187910172 23.719561520283825 25.16629829444724 41 15.511973689518483 22.424915408857775 27.52876381926618 34.534347082357556 42 21.807776935581927 23.078147990088983 23.744119668245606 31.369955406083484 43 21.88633469995534 24.788867161651353 26.101701872576477 27.223096265816828 44 17.720013050497073 30.215227042554954 30.199869353483756 21.86489055346422 45 14.898869263602348 41.71735765651573 22.49002634869881 20.893746731183114 46 21.665240595538627 35.066204378993795 25.052212604204044 18.216342421263533 47 21.02078383663382 27.86210352214798 26.466747772250425 24.650364868967774 48 23.49804277930293 22.746223742421122 33.43475069941181 20.32098277886414 49 21.709332025452717 22.092566524625738 34.65551004867043 21.542591401251123 50 19.23900881333189 36.54592125964191 25.820309376046108 18.394760550980095 51 17.202097987718094 37.31019630240635 22.39922489672485 23.08848081315071 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1348.0 1 1666.5 2 1985.0 3 7984.0 4 13983.0 5 10634.5 6 7286.0 7 8109.0 8 8932.0 9 9904.5 10 10877.0 11 11283.0 12 11689.0 13 11418.5 14 11148.0 15 10701.0 16 10254.0 17 9538.5 18 8823.0 19 7969.5 20 7116.0 21 6896.0 22 6676.0 23 6336.0 24 5996.0 25 6376.5 26 6208.5 27 5660.0 28 7201.0 29 8742.0 30 10875.0 31 13008.0 32 16066.0 33 19124.0 34 20465.5 35 21807.0 36 23552.0 37 25297.0 38 39711.0 39 54125.0 40 87182.5 41 120240.0 42 143789.5 43 167339.0 44 167262.0 45 167185.0 46 154805.0 47 142425.0 48 127647.5 49 112870.0 50 105879.0 51 98888.0 52 88574.0 53 78260.0 54 73025.5 55 67791.0 56 62362.0 57 56933.0 58 50951.5 59 44970.0 60 39406.0 61 33842.0 62 28535.0 63 23228.0 64 19809.0 65 16390.0 66 12991.5 67 9593.0 68 7734.5 69 5876.0 70 4395.5 71 2915.0 72 2341.0 73 1767.0 74 1383.0 75 715.5 76 432.0 77 310.0 78 188.0 79 129.0 80 70.0 81 75.0 82 80.0 83 49.0 84 18.0 85 18.0 86 18.0 87 17.0 88 16.0 89 11.5 90 7.0 91 3.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1412973.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.78945163387836 #Duplication Level Percentage of deduplicated Percentage of total 1 83.56920836322723 14.866503902591338 2 6.4269616280190025 2.2866424606887237 3 2.054713767452161 1.096566935626626 4 0.9512642764176291 0.6768987934547085 5 0.550551188016037 0.48970018655927805 6 0.38683241777826766 0.4128921951889632 7 0.2772537528979886 0.3452534559243021 8 0.22676705014591314 0.3227249176582393 9 0.18823254221281882 0.30136983350552166 >10 2.55119613487 11.184546041385484 >50 1.0853432068623754 14.017205173990789 >100 1.7208901488833726 51.82205919577299 >500 0.009587131748653886 1.0387194452148774 >1k 3.9946382286057863E-4 0.07120454840974941 >5k 7.989276457211573E-4 1.067712914028428 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8226 0.5821767294916463 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6799 0.4811839999773527 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02066564612345742 0.0 2 0.0 0.0 0.0 0.08959831504211332 0.0 3 0.0 0.0 0.0 0.1285941061860347 0.0 4 0.0 0.0 0.0 0.211681327244045 0.0 5 0.0 0.0 0.0 0.34020466066938293 0.0 6 0.0 0.0 0.0 0.49045523162862986 0.0 7 0.0 0.0 0.0 0.5748871351398788 0.0 8 0.0 0.0 0.0 0.76604436178186 0.0 9 0.0 0.0 0.0 0.8415588974453156 0.0 10 1.4154552139354395E-4 0.0 0.0 0.9598909533303184 0.0 11 1.4154552139354395E-4 0.0 0.0 1.1035596575447655 0.0 12 1.4154552139354395E-4 0.0 0.0 1.2224578955153425 0.0 13 1.4154552139354395E-4 0.0 0.0 1.2719280552423862 0.0 14 1.4154552139354395E-4 0.0 0.0 1.2921690648016628 0.0 15 1.4154552139354395E-4 0.0 0.0 1.3213982149694297 0.0 16 1.4154552139354395E-4 0.0 0.0 1.3896231562811179 0.0 17 1.4154552139354395E-4 0.0 0.0 1.4601835986957996 0.0 18 1.4154552139354395E-4 0.0 0.0 1.5778786997345313 0.0 19 1.4154552139354395E-4 0.0 0.0 1.6222532206914073 0.0 20 1.4154552139354395E-4 0.0 0.0 1.6699540614010318 0.0 21 1.4154552139354395E-4 0.0 0.0 1.737188184062965 0.0 22 1.4154552139354395E-4 0.0 0.0 1.8000343955616986 0.0 23 1.4154552139354395E-4 0.0 0.0 1.8773890230032704 0.0 24 1.4154552139354395E-4 0.0 0.0 1.9308224573293333 0.0 25 1.4154552139354395E-4 0.0 0.0 1.9816372995096156 0.0 26 1.4154552139354395E-4 0.0 0.0 2.0285596398515753 0.0 27 1.4154552139354395E-4 0.0 0.0 2.0723679787228773 0.0 28 2.1231828209031595E-4 0.0 0.0 2.1178040910902047 0.0 29 2.1231828209031595E-4 0.0 0.0 2.1669203870137648 0.0 30 2.1231828209031595E-4 0.0 0.0 2.24243492267722 0.0 31 2.1231828209031595E-4 0.0 0.0 2.305847316261528 0.0 32 2.1231828209031595E-4 0.0 0.0 2.364517934879152 0.0 33 2.1231828209031595E-4 0.0 0.0 2.42354241730026 0.0 34 2.1231828209031595E-4 0.0 0.0 2.488016402295019 0.0 35 2.1231828209031595E-4 0.0 0.0 2.5806579460470935 0.0 36 2.1231828209031595E-4 0.0 0.0 2.6541908444110396 0.0 37 2.1231828209031595E-4 0.0 0.0 2.7246805140650245 0.0 38 2.1231828209031595E-4 0.0 0.0 2.7897914539060547 0.0 39 2.1231828209031595E-4 0.0 0.0 2.8587948955854077 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGA 35 1.2121927E-7 45.000004 9 TACCCGC 25 3.8912607E-5 45.000004 24 ACCGGAT 25 3.8912607E-5 45.000004 11 TACCAGA 30 2.1658561E-6 45.000004 27 GACACGC 30 2.1658561E-6 45.000004 35 CTATATG 70 0.0 45.000004 1 TTAGATC 35 1.2121927E-7 45.000004 42 CTATACG 30 2.1658561E-6 45.000004 1 CACGCTA 30 2.1658561E-6 45.000004 37 ACCGACA 35 1.2121927E-7 45.000004 13 TTCGTCA 25 3.8912607E-5 45.000004 34 CGCGATA 25 3.8912607E-5 45.000004 11 TCGATTG 25 3.8912607E-5 45.000004 1 AGGCGAT 30 2.1658561E-6 45.000004 6 TGACCGG 60 0.0 45.000004 2 CGTAGGT 25 3.8912607E-5 45.000004 16 TACGACT 30 2.1658561E-6 45.000004 32 CTCATAG 25 3.8912607E-5 45.000004 25 ATAAGTC 25 3.8912607E-5 45.000004 12 TACCTGC 25 3.8912607E-5 45.000004 40 >>END_MODULE