##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545480_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1771633 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.931356550707736 31.0 31.0 33.0 28.0 34.0 2 31.216367046673888 31.0 31.0 34.0 28.0 34.0 3 31.30507277748834 31.0 31.0 34.0 28.0 34.0 4 35.1490506216581 35.0 35.0 37.0 32.0 37.0 5 35.015530304526955 35.0 35.0 37.0 32.0 37.0 6 35.073444669409525 37.0 35.0 37.0 32.0 37.0 7 35.570396351840365 37.0 35.0 37.0 35.0 37.0 8 35.48344267689753 37.0 35.0 37.0 35.0 37.0 9 37.158182874218305 39.0 37.0 39.0 34.0 39.0 10 36.556155817824575 39.0 35.0 39.0 32.0 39.0 11 36.25076412552713 38.0 35.0 39.0 32.0 39.0 12 35.562200523471844 37.0 35.0 39.0 30.0 39.0 13 35.138549010997195 37.0 34.0 39.0 30.0 39.0 14 36.16794956969079 38.0 35.0 40.0 30.0 41.0 15 36.48526020908393 38.0 35.0 40.0 31.0 41.0 16 36.56623070353736 38.0 35.0 40.0 31.0 41.0 17 36.45616840508164 38.0 35.0 40.0 31.0 41.0 18 36.39089755045204 38.0 35.0 40.0 31.0 41.0 19 36.29291732542801 37.0 35.0 40.0 31.0 41.0 20 36.14772359738163 37.0 34.0 40.0 30.0 41.0 21 35.99266721719453 37.0 34.0 40.0 30.0 41.0 22 35.87051099183635 37.0 34.0 40.0 30.0 41.0 23 35.79664862869454 37.0 34.0 40.0 30.0 41.0 24 35.68724560899464 37.0 34.0 40.0 30.0 41.0 25 35.550142721432714 36.0 34.0 40.0 29.0 41.0 26 35.38910485410918 36.0 34.0 40.0 29.0 41.0 27 35.29820002223937 36.0 34.0 40.0 29.0 41.0 28 35.33264507942672 36.0 34.0 40.0 29.0 41.0 29 35.355518326876954 36.0 34.0 40.0 29.0 41.0 30 35.23004990311199 36.0 34.0 40.0 29.0 41.0 31 35.08672168558612 36.0 34.0 40.0 27.0 41.0 32 34.877948762525875 36.0 34.0 40.0 27.0 41.0 33 34.64125527126668 36.0 33.0 40.0 25.0 41.0 34 34.466898618393316 36.0 33.0 40.0 24.0 41.0 35 34.277936796164894 36.0 33.0 40.0 24.0 41.0 36 34.10005288905772 36.0 33.0 40.0 23.0 41.0 37 34.049993424145974 36.0 33.0 40.0 23.0 41.0 38 34.01654744521015 36.0 33.0 40.0 23.0 41.0 39 33.96962237664347 36.0 33.0 40.0 23.0 41.0 40 33.797301134038484 35.0 33.0 40.0 23.0 41.0 41 33.71886163782228 35.0 33.0 40.0 23.0 41.0 42 33.68110438222815 35.0 33.0 40.0 23.0 41.0 43 33.58377327584212 35.0 32.0 40.0 23.0 41.0 44 33.498524242887775 35.0 32.0 40.0 22.0 41.0 45 33.448894889630076 35.0 32.0 40.0 23.0 41.0 46 33.3822648370176 35.0 32.0 39.0 22.0 41.0 47 33.305108337900684 35.0 32.0 39.0 22.0 41.0 48 33.25318336246841 35.0 32.0 39.0 22.0 41.0 49 33.262218529458416 35.0 32.0 39.0 22.0 41.0 50 33.16727561520924 35.0 32.0 39.0 22.0 41.0 51 32.979703471317144 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 2.0 12 6.0 13 10.0 14 31.0 15 83.0 16 215.0 17 602.0 18 1353.0 19 2590.0 20 4402.0 21 6986.0 22 10275.0 23 14355.0 24 20086.0 25 27433.0 26 35776.0 27 41899.0 28 45741.0 29 51177.0 30 59359.0 31 71247.0 32 86747.0 33 109908.0 34 171432.0 35 220884.0 36 135902.0 37 160754.0 38 213136.0 39 279133.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.88152794625072 23.87622041359582 26.957106804851794 16.28514483530167 2 32.863860630277266 25.50539530478378 28.71571030794753 12.91503375699143 3 29.20023503739206 25.10965871599818 32.45271452947648 13.23739171713329 4 27.271506006040752 27.191297520423248 30.89861161990096 14.638584853635036 5 23.15107022729877 31.520241494711378 30.69399813618283 14.634690141807022 6 21.70472101163164 40.50878483297613 27.981924021510096 9.80457013388213 7 84.17234269174259 4.873469843923657 8.984648626436739 1.9695388378970138 8 84.60787307529269 4.467742472622716 8.895634705381985 2.0287497467026183 9 79.32472470314111 6.3026597495079395 10.820073909212574 3.5525416381383725 10 46.23282587307868 24.578340999518524 17.022769388468152 12.166063738934644 11 40.78231778252042 22.640242081740407 22.964575620345748 13.612864515393424 12 37.73778203499257 21.214100211499787 26.701410506577826 14.34670724692981 13 22.058123776199697 34.93912113852022 25.77164683656265 17.231108248717426 14 15.914752095947637 37.446807549870655 29.477719143863318 17.16072121031839 15 16.329115567388957 23.607541742561803 43.9920683346946 16.071274355354635 16 17.925439410984104 19.22858741059802 43.64555187219927 19.20042130621861 17 17.73629188438012 20.094229448198355 30.764215839284997 31.405262828136525 18 21.098669984133284 23.454801304784908 34.16926643384945 21.27726227723236 19 29.3466536240858 23.714222979590016 27.37570365871487 19.563419737609316 20 31.51104094358143 22.184165682170065 27.10008224050918 19.204711133739323 21 23.93136727527654 27.3713573860952 28.415817497190442 20.281457841437813 22 23.78709360234315 25.265108518524997 26.332936900588326 24.614860978543522 23 21.380839033817953 29.17466540756466 26.411056917544435 23.033438641072955 24 20.579205738434542 23.30048040423722 37.56562448317457 18.554689374153675 25 19.483719257882417 24.909730175493458 34.79044474786821 20.81610581875592 26 18.315475044775077 32.03011007358747 28.78733913852361 20.867075743113837 27 19.74477784055727 31.76747102814183 29.212652959162533 19.27509817213836 28 17.013963953030906 28.825496025418357 36.35911049297456 17.80142952857618 29 18.44721790574007 25.501500592955768 34.87872488263653 21.172556618667638 30 19.388214150447638 29.75808195038137 31.1771681832524 19.676535715918593 31 26.887792223332934 27.55677953616804 26.720263169629376 18.835165070869646 32 28.856202159250817 26.042357531159105 27.641560074801045 17.459880234789033 33 26.99063519363209 27.123111840883524 26.12256601677661 19.76368694870777 34 20.807131048021795 27.913907677267247 28.191730454332248 23.087230820378714 35 21.565188727010618 25.758495128505736 30.40533790011814 22.27097824436551 36 27.301534798685733 28.426880736585964 25.095378105962123 19.17620635876618 37 21.630721486899375 32.755824710874094 28.02945079483166 17.584003007394873 38 21.367630880662077 31.82239210942673 25.9080181956421 20.901958814269094 39 21.875693216371562 30.90566725727055 26.67036570215163 20.548273824206255 40 23.950615054020783 26.756500923159592 27.455291248243853 21.83759277457577 41 17.920246461880083 26.726133459920874 28.86732184374529 26.48629823445375 42 21.654371983362243 27.201796308829202 25.243659380921446 25.900172326887116 43 22.048753889772883 27.55395728122021 26.731044183530113 23.6662446454768 44 20.23861601132966 29.404340515219573 28.448273429090566 21.908770044360203 45 18.300291313155714 34.24456419585772 24.948564403575684 22.506580087410878 46 20.640448670802588 33.010279216971014 25.991895612691795 20.35737649953461 47 22.190543978352174 28.50342029077128 27.055603502531277 22.25043222834526 48 22.436644609803498 26.132331018896128 30.353747079671695 21.077277291628686 49 20.797140265506457 27.555029738100384 30.33517664211493 21.312653354278225 50 19.60744691479556 32.57813553935832 27.277206961035382 20.537210584810737 51 18.931629744986687 32.20593655683767 25.762446285432706 23.099987412742934 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1694.0 1 2740.5 2 3787.0 3 12771.5 4 21756.0 5 16288.0 6 10820.0 7 10965.0 8 11110.0 9 11272.0 10 11434.0 11 11625.0 12 11816.0 13 11615.0 14 11414.0 15 10877.5 16 10341.0 17 10020.0 18 9699.0 19 9593.5 20 9488.0 21 9459.0 22 9430.0 23 9116.0 24 8802.0 25 10760.5 26 15174.0 27 17629.0 28 20387.5 29 23146.0 30 26027.5 31 28909.0 32 33466.0 33 38023.0 34 42377.0 35 46731.0 36 48198.0 37 49665.0 38 58927.5 39 68190.0 40 88156.5 41 108123.0 42 126727.0 43 145331.0 44 151234.0 45 157137.0 46 152351.0 47 147565.0 48 135688.0 49 123811.0 50 119953.5 51 116096.0 52 109966.0 53 103836.0 54 95994.5 55 88153.0 56 86320.0 57 84487.0 58 84011.5 59 83536.0 60 76073.0 61 68610.0 62 58976.5 63 49343.0 64 40086.5 65 30830.0 66 24752.0 67 18674.0 68 14645.0 69 10616.0 70 8930.5 71 7245.0 72 6033.5 73 4822.0 74 4011.5 75 2390.5 76 1580.0 77 1350.5 78 1121.0 79 807.0 80 493.0 81 368.5 82 244.0 83 161.5 84 79.0 85 77.0 86 75.0 87 45.0 88 15.0 89 8.5 90 2.0 91 3.0 92 4.0 93 2.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1771633.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.890994433421444 #Duplication Level Percentage of deduplicated Percentage of total 1 79.67342161299534 15.847835857957302 2 6.502499369394721 2.5868235751991366 3 2.4097047712758903 1.4379427257491348 4 1.2722104664318017 1.0122212522374188 5 0.8172843199077996 0.8128298928904336 6 0.5655060630634909 0.6749086771477185 7 0.4746402466537014 0.6608746552846588 8 0.3935693775457122 0.6262789038341523 9 0.33727422393508677 0.6037847739746414 >10 4.800844273243987 22.800492943673202 >50 1.8421088183212186 26.60972459416961 >100 0.9046678923086436 24.40903427284864 >500 0.004274021538134674 0.5900008980461194 >1k 0.0017096086152538696 0.6649837211119232 >5k 0.0 0.0 >10k+ 2.849347692089783E-4 0.6622632558759757 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11685 0.6595609813093344 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3221 0.18180966373961197 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2563 0.1446687886260868 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1931 0.10899548608543644 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013829049244397682 0.0 2 0.0 0.0 0.0 0.050744143962095985 0.0 3 0.0 0.0 0.0 0.07727334047175685 0.0 4 0.0 0.0 0.0 0.11655912934563761 0.0 5 0.0 0.0 0.0 0.18982486779146696 0.0 6 5.644509895672524E-5 0.0 0.0 0.30277151080387416 0.0 7 5.644509895672524E-5 0.0 0.0 0.37140875113525207 0.0 8 5.644509895672524E-5 0.0 0.0 0.541308498994995 0.0 9 5.644509895672524E-5 0.0 0.0 0.6329753397007168 0.0 10 5.644509895672524E-5 0.0 0.0 0.7723382890248714 0.0 11 5.644509895672524E-5 0.0 0.0 0.8929050203964365 0.0 12 5.644509895672524E-5 0.0 0.0 0.9965946671799407 0.0 13 5.644509895672524E-5 0.0 0.0 1.0433312091161093 0.0 14 5.644509895672524E-5 0.0 0.0 1.0634821094436602 0.0 15 5.644509895672524E-5 0.0 0.0 1.0918739942188929 0.0 16 5.644509895672524E-5 0.0 0.0 1.1463999598110894 0.0 17 5.644509895672524E-5 0.0 0.0 1.2060059843093913 0.0 18 5.644509895672524E-5 0.0 0.0 1.2971648191245027 0.0 19 5.644509895672524E-5 0.0 0.0 1.3375230648785612 0.0 20 5.644509895672524E-5 0.0 0.0 1.3805906753825425 0.0 21 5.644509895672524E-5 0.0 0.0 1.437995341021532 0.0 22 5.644509895672524E-5 0.0 0.0 1.5005929557645403 0.0 23 5.644509895672524E-5 0.0 0.0 1.5686093000073944 0.0 24 5.644509895672524E-5 0.0 0.0 1.6256752950526436 0.0 25 5.644509895672524E-5 0.0 0.0 1.6732020683742062 0.0 26 5.644509895672524E-5 0.0 0.0 1.7208417318936822 0.0 27 5.644509895672524E-5 0.0 0.0 1.7649253541788847 0.0 28 5.644509895672524E-5 0.0 0.0 1.8123392373025338 0.0 29 5.644509895672524E-5 0.0 0.0 1.8629704910667164 0.0 30 5.644509895672524E-5 0.0 0.0 1.932736633377229 0.0 31 5.644509895672524E-5 0.0 0.0 1.99476979713067 0.0 32 5.644509895672524E-5 0.0 0.0 2.0565771804882838 0.0 33 5.644509895672524E-5 0.0 0.0 2.1162396500855425 0.0 34 5.644509895672524E-5 0.0 0.0 2.1803048374014256 0.0 35 5.644509895672524E-5 0.0 0.0 2.2616422249980666 0.0 36 5.644509895672524E-5 0.0 0.0 2.3323679339908434 0.0 37 5.644509895672524E-5 0.0 0.0 2.402303411598226 0.0 38 5.644509895672524E-5 0.0 0.0 2.47359357158057 0.0 39 5.644509895672524E-5 0.0 0.0 2.542456592307775 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCGTA 30 2.1661708E-6 45.000004 27 GTACCGA 25 3.891664E-5 45.0 36 ATCTACG 25 3.891664E-5 45.0 1 CGGATTA 20 7.0343236E-4 45.0 20 GGACGTA 20 7.0343236E-4 45.0 9 CTAACGG 115 0.0 43.04348 2 AATACGG 115 0.0 43.04348 2 ACGGGTA 100 0.0 42.75 5 CGTTTTT 9220 0.0 40.38774 1 GCGATAT 130 0.0 39.807693 9 CGGTCTA 120 0.0 39.375004 31 GGTACCT 1270 0.0 38.97638 8 ACCGCGA 35 6.250204E-6 38.57143 25 CAAGCGT 70 0.0 38.57143 17 GGACTAA 1445 0.0 38.3045 8 AGTACGG 195 0.0 38.076927 2 TTGGGAC 615 0.0 38.04878 5 GTTGATC 1280 0.0 37.96875 16 AGGGCGA 1975 0.0 37.93671 6 TAGTAGG 625 0.0 37.8 2 >>END_MODULE