##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545479_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 896943 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.918506527170624 31.0 31.0 33.0 28.0 34.0 2 31.198196540917316 31.0 31.0 34.0 28.0 34.0 3 31.314626458983458 31.0 31.0 34.0 28.0 34.0 4 35.157454821543844 35.0 35.0 37.0 32.0 37.0 5 35.01883285782932 35.0 35.0 37.0 32.0 37.0 6 35.07274709764165 37.0 35.0 37.0 32.0 37.0 7 35.52217587962669 37.0 35.0 37.0 35.0 37.0 8 35.425291239242625 37.0 35.0 37.0 35.0 37.0 9 37.14580636673679 39.0 37.0 39.0 34.0 39.0 10 36.583845350261946 39.0 35.0 39.0 32.0 39.0 11 36.261992122130394 38.0 35.0 39.0 32.0 39.0 12 35.29441781696273 37.0 35.0 39.0 30.0 39.0 13 34.76632182870038 37.0 33.0 39.0 27.0 39.0 14 35.72539392135286 37.0 34.0 40.0 28.0 41.0 15 36.13580573124491 38.0 34.0 40.0 30.0 41.0 16 36.269473088033465 37.0 34.0 40.0 31.0 41.0 17 36.18915025815464 37.0 34.0 40.0 31.0 41.0 18 36.15201857866107 37.0 35.0 40.0 31.0 41.0 19 36.05276143523056 37.0 35.0 40.0 30.0 41.0 20 35.88094115233633 36.0 34.0 40.0 30.0 41.0 21 35.693223538173555 36.0 34.0 40.0 30.0 41.0 22 35.55703539689813 36.0 34.0 40.0 30.0 41.0 23 35.52965907532586 36.0 34.0 40.0 30.0 41.0 24 35.416088870753214 35.0 34.0 40.0 29.0 41.0 25 35.2995508075764 35.0 34.0 40.0 29.0 41.0 26 35.14263559668786 35.0 34.0 40.0 29.0 41.0 27 35.01830439615449 35.0 34.0 40.0 29.0 41.0 28 35.077787551717336 36.0 34.0 40.0 29.0 41.0 29 35.14772399137961 36.0 34.0 40.0 29.0 41.0 30 35.063257085455824 36.0 34.0 40.0 29.0 41.0 31 34.878846258903856 35.0 34.0 40.0 27.0 41.0 32 34.62025123112617 35.0 33.0 40.0 27.0 41.0 33 34.38563431567 35.0 33.0 40.0 25.0 41.0 34 34.23946672196561 35.0 33.0 40.0 24.0 41.0 35 34.064069846132924 35.0 33.0 40.0 23.0 41.0 36 33.814559007651546 35.0 33.0 40.0 23.0 41.0 37 33.76730962837103 35.0 33.0 40.0 23.0 41.0 38 33.79982005545503 35.0 33.0 40.0 23.0 41.0 39 33.763889121159316 35.0 33.0 40.0 23.0 41.0 40 33.55556261657653 35.0 32.0 40.0 23.0 41.0 41 33.544759254489975 35.0 33.0 39.0 23.0 41.0 42 33.49669822943041 35.0 32.0 39.0 23.0 41.0 43 33.41731191391203 35.0 32.0 39.0 23.0 41.0 44 33.363300677969505 35.0 32.0 39.0 23.0 41.0 45 33.3190570638268 35.0 32.0 39.0 23.0 41.0 46 33.27485804560602 35.0 32.0 39.0 23.0 41.0 47 33.20053002253209 35.0 32.0 39.0 23.0 41.0 48 33.1579331128065 35.0 32.0 39.0 23.0 41.0 49 33.18397044182295 35.0 32.0 39.0 22.0 41.0 50 33.07618098362995 35.0 32.0 39.0 22.0 41.0 51 32.89831237882452 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 3.0 13 4.0 14 10.0 15 29.0 16 110.0 17 288.0 18 719.0 19 1392.0 20 2265.0 21 3534.0 22 5420.0 23 7490.0 24 10300.0 25 14435.0 26 18775.0 27 21982.0 28 23870.0 29 26464.0 30 30737.0 31 36920.0 32 45854.0 33 58211.0 34 96228.0 35 127523.0 36 62949.0 37 73071.0 38 97253.0 39 131054.0 40 52.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.792942249396006 23.700391217725095 27.70633139452563 15.800335138353272 2 32.09568501008425 25.692714029765547 29.649375712837937 12.56222524731226 3 29.430632715791305 25.31387167300486 31.88864844254317 13.366847168660662 4 26.994691970392772 27.350344447751972 30.85725625820147 14.797707323653789 5 23.230238710821087 31.987874368828344 30.573626194752624 14.208260725597949 6 21.549975862457256 40.58273491180599 27.80611476983487 10.061174455901881 7 84.96548833091958 5.134662960745555 8.328288419665464 1.5715602886694027 8 86.29734553923717 3.9525365602942437 8.001177332338845 1.7489405681297472 9 81.05977748864755 6.153791266557629 9.700504937326006 3.0859263074688137 10 52.7045754300998 21.51028549194319 14.996270666028947 10.788868411928071 11 47.631343351807196 20.22347016477078 19.683525040052714 12.46166144336931 12 42.51061661666349 21.25296702243063 24.133529109430587 12.10288725147529 13 21.271362840225073 40.57716042156525 24.185037399255023 13.96643933895465 14 15.286478627961866 42.81442633478382 28.08829546582113 13.810799571433192 15 14.60538741034826 22.75584959133412 48.89719859567442 13.7415644026432 16 15.61135991919219 17.935922349580743 48.22848274639526 18.22423498483181 17 16.18965753676655 18.32111962521587 30.4348213877582 35.054401450259384 18 20.980374449658452 22.82017920871226 35.79491673383927 20.404529607790014 19 30.56091635700373 23.300365798049597 26.556982996689865 19.5817348482568 20 33.04769645339782 21.552540127967998 26.08772240822438 19.312041010409803 21 22.891421193988915 28.79469486912769 28.540163644735507 19.773720292147885 22 23.320545452721074 25.393363903837813 25.13058243388933 26.155508209551776 23 20.641779912435908 30.197236613697857 26.16152865901178 22.999454814854456 24 19.59355276756717 23.268033754653306 40.59098515736228 16.54742832041724 25 17.664444674856707 24.59587732999756 37.630373390505305 20.10930460464043 26 16.91634808454941 34.29392949161764 28.68153271724067 20.10818970659228 27 18.49069561833918 34.367289783185775 29.142989019369125 17.99902557910592 28 15.300637833173344 29.044543521717657 39.155442430566936 16.49937621454206 29 16.16412637146396 24.80547816304938 38.111563388085976 20.91883207740068 30 18.174510531884412 31.66098626111135 32.12801705348055 18.03648615352369 31 29.269418458029108 27.216333702364587 25.67833184494444 17.835915994661868 32 31.222831328189194 25.90465614871848 26.91787549487537 15.954637028216956 33 29.2083220449906 27.911918594604117 24.58963390092793 18.29012545947736 34 19.558321989245695 27.991187845827437 28.572830157546242 23.877660007380623 35 20.983161694778822 25.900308046330707 31.253379534708447 21.863150724182027 36 30.88000017838369 25.965195112732914 25.127014760135257 18.027789948748136 37 20.46116642863593 34.58157318803982 28.247837376511104 16.709423006813143 38 21.04659939371844 34.3056359211232 23.786126877627677 20.861637807530688 39 21.380734338748393 33.14759131851188 26.554307241374314 18.917367101365414 40 24.764672894487163 26.594778040522083 25.63819551521111 23.00235354977964 41 17.506798090848584 25.830515428516637 27.597405855221567 29.06528062541321 42 21.330563926581732 26.800476730405386 24.3814824353387 27.48747690767418 43 22.086799272640516 27.13305081816793 25.67476417119037 25.10538573800119 44 19.576940786649764 30.310510255389694 28.87151134464509 21.24103761331545 45 17.470452414478956 37.69481449768826 23.363246047965145 21.47148703986764 46 20.868438685624394 34.40430439838429 25.47185272642743 19.255404189563883 47 22.788962063364117 27.964207313062257 26.521083279539504 22.725747344034126 48 23.491013364282903 24.094730657355036 31.41704656817657 20.997209410185487 49 21.475166203426525 25.26927575107894 32.302944557234966 20.952613488259566 50 19.393763037339053 34.57309996287389 26.493656787555064 19.539480212231993 51 18.87455501631653 34.6093341494387 24.386276496945737 22.129834337299027 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 691.0 1 1146.0 2 1601.0 3 5556.0 4 9511.0 5 7108.5 6 4706.0 7 4908.0 8 5110.0 9 5322.0 10 5534.0 11 5675.0 12 5816.0 13 5692.5 14 5569.0 15 5455.0 16 5341.0 17 4864.5 18 4388.0 19 4142.0 20 3896.0 21 3862.5 22 3829.0 23 4127.5 24 4426.0 25 4907.5 26 5852.5 27 6316.0 28 8477.5 29 10639.0 30 12929.0 31 15219.0 32 17494.0 33 19769.0 34 21011.0 35 22253.0 36 22774.5 37 23296.0 38 28871.0 39 34446.0 40 46830.5 41 59215.0 42 73415.5 43 87616.0 44 90348.5 45 93081.0 46 86206.0 47 79331.0 48 73997.0 49 68663.0 50 64168.0 51 59673.0 52 56979.0 53 54285.0 54 48570.5 55 42856.0 56 42012.5 57 41169.0 58 38376.0 59 35583.0 60 32418.0 61 29253.0 62 23834.0 63 18415.0 64 15393.0 65 12371.0 66 9894.5 67 7418.0 68 5743.5 69 4069.0 70 3314.0 71 2559.0 72 2094.5 73 1630.0 74 1304.0 75 709.5 76 441.0 77 383.0 78 325.0 79 239.5 80 154.0 81 112.0 82 70.0 83 45.5 84 21.0 85 16.0 86 11.0 87 10.0 88 9.0 89 4.5 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 896943.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.263207308633657 #Duplication Level Percentage of deduplicated Percentage of total 1 80.45628384348856 15.498460749593928 2 5.25283939409307 2.0237306841474485 3 1.7720272466653253 1.024047846271844 4 1.0624759854029566 0.8186678066904792 5 0.7226461018300062 0.6960240835163698 6 0.5938559531119708 0.6863742201757274 7 0.46480271886217484 0.6267513791741048 8 0.4303809835482379 0.6632414486226687 9 0.40515499643885117 0.7024126219677287 >10 5.780848265467053 27.522743932304472 >50 2.440353621841193 33.27780811275523 >100 0.6137035299297241 15.139940831680645 >500 0.002313679660432513 0.28189823522510493 >1k 0.001735259745324385 0.4675276660096997 >5k 5.784199151081282E-4 0.5703703818645502 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5119 0.5707163108469546 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2116 0.23591242698811407 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1065 0.11873664212776064 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1015 0.1131621518870207 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009699613018887488 0.0 2 0.0 0.0 0.0 0.040136329733327536 0.0 3 0.0 0.0 0.0 0.05607937182184375 0.0 4 0.0 0.0 0.0 0.08517821087850622 0.0 5 0.0 0.0 0.0 0.13546011284998044 0.0 6 0.0 0.0 0.0 0.19689099530293452 0.0 7 0.0 0.0 0.0 0.23000346733292973 0.0 8 0.0 0.0 0.0 0.31585061704032474 0.0 9 0.0 0.0 0.0 0.35130437497143074 0.0 10 0.0 0.0 0.0 0.4069377875740153 0.0 11 0.0 0.0 0.0 0.47048697631845054 0.0 12 0.0 0.0 0.0 0.5276812461884423 0.0 13 0.0 0.0 0.0 0.5519860236380684 0.0 14 0.0 0.0 0.0 0.5625775550954742 0.0 15 0.0 0.0 0.0 0.5759563316732501 0.0 16 0.0 0.0 0.0 0.6094032731176897 0.0 17 0.0 0.0 0.0 0.6509889703136097 0.0 18 0.0 0.0 0.0 0.7070683421354534 0.0 19 0.0 0.0 0.0 0.7291433234887835 0.0 20 0.0 0.0 0.0 0.7552319378154465 0.0 21 0.0 0.0 0.0 0.7928040020380336 0.0 22 0.0 0.0 0.0 0.829707127431732 0.0 23 0.0 0.0 0.0 0.8737456003335775 0.0 24 0.0 0.0 0.0 0.9098682970935723 0.0 25 0.0 0.0 0.0 0.9359569114202352 0.0 26 0.0 0.0 0.0 0.9666166077443048 0.0 27 0.0 0.0 0.0 0.9927052220709677 0.0 28 0.0 0.0 0.0 1.0235878980046669 0.0 29 0.0 0.0 0.0 1.0575922884731805 0.0 30 0.0 0.0 0.0 1.0998469244979894 0.0 31 0.0 0.0 0.0 1.1474530711539084 0.0 32 0.0 0.0 0.0 1.1891502581546431 0.0 33 0.0 0.0 0.0 1.2304014859361185 0.0 34 0.0 0.0 0.0 1.2747744282524085 0.0 35 0.0 0.0 0.0 1.3384351068016584 0.0 36 0.0 0.0 0.0 1.389162967992392 0.0 37 0.0 0.0 0.0 1.440113808792755 0.0 38 0.0 0.0 0.0 1.4940748743231176 0.0 39 0.0 0.0 0.0 1.5473670010245912 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAG 35 1.2115197E-7 45.000004 1 TAAACGC 35 1.2115197E-7 45.000004 27 TTATACG 45 3.8380676E-10 45.000004 1 TTAAACG 45 3.8380676E-10 45.000004 1 GTACGAG 45 3.8380676E-10 45.000004 1 AATCCGG 40 6.8121153E-9 45.0 2 TCGTTAG 80 0.0 45.0 1 GTCGAAA 20 7.0324575E-4 45.0 10 ATTCGGT 25 3.8901184E-5 45.0 14 ACGGGTC 20 7.0324575E-4 45.0 5 GACCCGT 20 7.0324575E-4 45.0 32 GGACCTA 40 6.8121153E-9 45.0 8 ACGTACG 20 7.0324575E-4 45.0 1 CAATCTA 20 7.0324575E-4 45.0 18 CCGTTAT 25 3.8901184E-5 45.0 23 ACGACTG 20 7.0324575E-4 45.0 1 ATCGAAG 25 3.8901184E-5 45.0 1 ACGCGTA 20 7.0324575E-4 45.0 28 ATAGACG 30 2.1649666E-6 44.999996 1 CTAAGCG 30 2.1649666E-6 44.999996 1 >>END_MODULE