##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545475_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1016912 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93985418600626 31.0 31.0 33.0 28.0 34.0 2 31.222449926837328 31.0 31.0 34.0 28.0 34.0 3 31.287712211086113 31.0 31.0 34.0 28.0 34.0 4 35.11334314080274 35.0 35.0 37.0 32.0 37.0 5 34.966308785814306 35.0 35.0 37.0 32.0 37.0 6 35.024070912724014 37.0 35.0 37.0 32.0 37.0 7 35.57798118224586 37.0 35.0 37.0 35.0 37.0 8 35.5218740657992 37.0 35.0 37.0 35.0 37.0 9 37.226951791305446 39.0 37.0 39.0 34.0 39.0 10 36.603546816243686 39.0 35.0 39.0 32.0 39.0 11 36.24854363012729 38.0 35.0 39.0 32.0 39.0 12 35.168037155624084 37.0 35.0 39.0 30.0 39.0 13 34.56001895935932 37.0 33.0 39.0 27.0 39.0 14 35.4787533237881 37.0 33.0 40.0 27.0 41.0 15 35.945081776987585 37.0 34.0 40.0 30.0 41.0 16 36.12855979671791 37.0 34.0 40.0 31.0 41.0 17 36.05771689192378 37.0 34.0 40.0 31.0 41.0 18 35.981023923407335 36.0 34.0 40.0 30.0 41.0 19 35.83950331985462 36.0 34.0 40.0 30.0 41.0 20 35.65520615353147 36.0 34.0 40.0 30.0 41.0 21 35.452517031955566 35.0 34.0 40.0 30.0 41.0 22 35.323975919253584 35.0 34.0 40.0 29.0 41.0 23 35.32983384992998 35.0 34.0 40.0 29.0 41.0 24 35.233998615416084 35.0 34.0 40.0 29.0 41.0 25 35.112056893811854 35.0 34.0 40.0 29.0 41.0 26 34.92224892616077 35.0 34.0 40.0 29.0 41.0 27 34.78384560315937 35.0 34.0 40.0 27.0 41.0 28 34.86425570747518 35.0 34.0 40.0 28.0 41.0 29 34.93875084569756 36.0 34.0 40.0 29.0 41.0 30 34.828554486523906 36.0 34.0 40.0 28.0 41.0 31 34.598665371241566 35.0 33.0 40.0 27.0 41.0 32 34.323372130528504 35.0 33.0 40.0 25.0 41.0 33 34.048022837767675 35.0 33.0 40.0 24.0 41.0 34 33.84625414981827 35.0 33.0 40.0 23.0 41.0 35 33.63212057680507 35.0 33.0 40.0 23.0 41.0 36 33.39163565775603 35.0 33.0 39.0 21.0 41.0 37 33.324014270654686 35.0 32.0 39.0 22.0 41.0 38 33.341137679563225 35.0 32.0 39.0 23.0 41.0 39 33.300385874097266 35.0 32.0 39.0 22.0 41.0 40 33.08045533930173 35.0 32.0 39.0 21.0 41.0 41 33.076574964205356 35.0 32.0 39.0 21.0 41.0 42 33.04968178170776 35.0 32.0 39.0 21.0 41.0 43 32.90392875686392 35.0 32.0 39.0 20.0 41.0 44 32.86324775398461 35.0 32.0 39.0 20.0 41.0 45 32.79539527510738 35.0 32.0 39.0 20.0 41.0 46 32.75791120568938 35.0 32.0 39.0 20.0 40.0 47 32.71178135374546 35.0 32.0 39.0 20.0 40.0 48 32.70795211385056 35.0 32.0 38.0 20.0 40.0 49 32.734850213194456 35.0 32.0 38.0 20.0 40.0 50 32.61953935050427 35.0 32.0 38.0 20.0 40.0 51 32.41232279685951 35.0 31.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 4.0 14 11.0 15 62.0 16 177.0 17 424.0 18 1036.0 19 1856.0 20 3109.0 21 4833.0 22 7100.0 23 9752.0 24 13622.0 25 18544.0 26 23994.0 27 26817.0 28 28558.0 29 30963.0 30 35660.0 31 43002.0 32 52559.0 33 67242.0 34 111668.0 35 152412.0 36 66638.0 37 77556.0 38 102177.0 39 137077.0 40 54.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.41942272291015 23.530649653067325 26.378782038170463 17.67114558585207 2 32.72603725789448 24.973449030004563 29.250711959343583 13.049801752757368 3 28.073422282360717 25.12921472064446 33.15203282093239 13.645330176062432 4 26.10009519014428 27.057896848498196 31.77659423824284 15.065413723114684 5 22.48168966439574 31.447165536447596 31.83136790597417 14.239776893182498 6 21.758913258964395 38.85321443743411 29.302633856223547 10.085238447377943 7 84.06125603788726 5.1686871627043445 9.222233585600327 1.5478232138080776 8 85.711054643863 3.8472355523388457 8.791419513192881 1.6502902906052834 9 81.65613150400428 5.055993045612599 10.652052488317572 2.6358229620655473 10 53.51603678587724 20.88656638922542 15.769801123401042 9.827595701496294 11 50.018192331293164 20.027396667558257 19.60346617996444 10.350944821184134 12 44.16842361974291 22.161897981339585 22.811806724672344 10.857871674245166 13 20.276582437811726 44.6269687052567 22.732547162389665 12.363901694541907 14 13.71544440423557 45.31778560976761 28.403047658007775 12.56372232798905 15 12.953038217662884 22.330250798495836 52.92955535975581 11.787155624085468 16 14.314512956873356 17.450379187186304 50.78040184401404 17.4547060119263 17 14.719857765470366 17.586674166496216 30.728322608052615 36.9651454599808 18 21.055509227937126 21.799133061661184 37.547988419843605 19.59736929055808 19 30.50549113394276 22.503127114243906 27.58075428355649 19.41062746825684 20 32.713056783674496 21.459969004200953 26.21524773038375 19.6117264817408 21 21.42102758154098 28.314249413911924 29.960802901332663 20.303920103214438 22 21.847416492282516 25.160485863083533 26.428638859606334 26.56345878502761 23 18.630520635020535 31.250590021555453 26.792387148543828 23.326502194880185 24 18.407984171688405 22.69065563195242 43.36058577340026 15.54077442295892 25 15.925665150966847 23.868732004342558 40.26051418411819 19.9450886605724 26 15.573815630064352 35.788052456849755 29.329479836996715 19.30865207608918 27 16.412039586512893 36.64791053699828 30.1769474644807 16.76310241200812 28 13.853509448211842 29.503437858929782 40.84473386094372 15.79831883191466 29 14.675212801107667 24.883274068945983 40.74698695659015 19.6945261733562 30 17.562384945796687 31.305462026212695 33.59268058593074 17.539472442059882 31 29.16122535676637 26.717946095630694 26.397269380241354 17.72355916736158 32 31.007796151486065 26.539267901253993 27.64486995924918 14.808065988010762 33 29.281294743301288 26.403366269647716 25.753064178611325 18.562274808439668 34 19.658731532325312 27.513885173938355 29.244025048381765 23.583358245354564 35 20.505412464402035 25.78708875497585 32.663888320719984 21.043610459902133 36 31.138387589093252 25.489324543323317 25.929972308321663 17.442315559261765 37 19.985898484824645 35.12014805607565 28.552126437685853 16.34182702141385 38 20.73070236165961 34.781377346319054 23.871682112119828 20.616238179901504 39 20.6118130182356 33.04435388706201 26.927207073965103 19.41662602073729 40 24.53535802507985 25.76496294664632 26.522550623849455 23.177128404424373 41 16.035114149503595 25.063132306433594 28.434122126595025 30.467631417467782 42 22.185105495854117 25.912468335509857 24.729966801453813 27.172459367182217 43 21.891471435089763 26.972147049105526 26.308372799219597 24.828008716585114 44 19.08847569897887 32.14909451358623 29.048236228896897 19.714193558538003 45 16.63683779914093 39.398984376229215 23.318536903881554 20.645640920748303 46 20.359480466353038 34.91993407492487 26.051221737967495 18.669363720754596 47 22.079294963576 28.006553172742578 26.907736362635116 23.006415501046305 48 23.614334377015908 23.887907704894822 31.95428906336045 20.54346885472883 49 20.781935900058215 25.0555603631386 33.07769010494517 21.08481363185802 50 18.69542300612049 36.06142911087685 26.106880438032004 19.136267444970656 51 17.880996585741933 36.070279434208665 23.439392985823748 22.609330994225658 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 976.0 1 1516.5 2 2057.0 3 6548.0 4 11039.0 5 8438.5 6 5838.0 7 6243.5 8 6649.0 9 7307.5 10 7966.0 11 8039.0 12 8112.0 13 7897.5 14 7683.0 15 7393.5 16 7104.0 17 6674.0 18 6244.0 19 5815.0 20 5386.0 21 5363.5 22 5341.0 23 5542.0 24 5743.0 25 6023.5 26 6914.5 27 7525.0 28 8956.0 29 10387.0 30 11779.0 31 13171.0 32 17173.0 33 21175.0 34 23092.5 35 25010.0 36 24955.0 37 24900.0 38 32350.5 39 39801.0 40 55420.0 41 71039.0 42 90575.0 43 110111.0 44 109953.0 45 109795.0 46 104406.0 47 99017.0 48 90095.5 49 81174.0 50 76892.5 51 72611.0 52 67022.0 53 61433.0 54 53367.0 55 45301.0 56 41770.5 57 38240.0 58 35333.5 59 32427.0 60 28703.0 61 24979.0 62 21109.0 63 17239.0 64 13921.5 65 10604.0 66 8131.0 67 5658.0 68 4448.0 69 3238.0 70 2763.5 71 2289.0 72 1823.0 73 1357.0 74 1116.0 75 684.5 76 494.0 77 399.5 78 305.0 79 224.0 80 143.0 81 105.0 82 67.0 83 72.0 84 77.0 85 47.5 86 18.0 87 11.5 88 5.0 89 3.0 90 1.0 91 2.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1016912.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.374970830319622 #Duplication Level Percentage of deduplicated Percentage of total 1 81.01152754588263 16.50607510666993 2 6.538858828733267 2.6645811579803653 3 2.3940096563471824 1.4633363074673207 4 1.2420708911463192 1.012286327051814 5 0.7904756453592381 0.8052959108136278 6 0.5004132272202055 0.6117542944630677 7 0.3793379170668831 0.5410299296550362 8 0.31202511162028534 0.508600203807243 9 0.2614879702572926 0.47950287898246396 >10 3.7387805668113714 18.838073841207965 >50 1.8073285556052932 27.097502647513753 >100 1.0207745128919616 28.206973239582332 >500 0.0019397140387495708 0.2670673265983069 >1k 4.849285096873927E-4 0.4132973093454376 >5k 4.849285096873927E-4 0.5846235188613327 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5917 0.5818595906037101 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4183 0.411343361077458 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014750538886353982 0.0 2 0.0 0.0 0.0 0.04975848450996743 0.0 3 0.0 0.0 0.0 0.06863917428450053 0.0 4 0.0 0.0 0.0 0.10463048916720424 0.0 5 0.0 0.0 0.0 0.16235426467580283 0.0 6 0.0 0.0 0.0 0.2396470884402977 0.0 7 0.0 0.0 0.0 0.2834070204698145 0.0 8 0.0 0.0 0.0 0.4046564501156442 0.0 9 0.0 0.0 0.0 0.4641502902906053 0.0 10 0.0 0.0 0.0 0.563273911606904 0.0 11 0.0 0.0 0.0 0.6570873389241154 0.0 12 0.0 0.0 0.0 0.7398870305395157 0.0 13 9.833692590902655E-5 0.0 0.0 0.774403291533584 0.0 14 9.833692590902655E-5 0.0 0.0 0.7904322104567554 0.0 15 9.833692590902655E-5 0.0 0.0 0.8122630080085592 0.0 16 9.833692590902655E-5 0.0 0.0 0.8631031987035259 0.0 17 9.833692590902655E-5 0.0 0.0 0.9136483786207656 0.0 18 9.833692590902655E-5 0.0 0.0 0.9927112670516229 0.0 19 9.833692590902655E-5 0.0 0.0 1.0230973771575123 0.0 20 9.833692590902655E-5 0.0 0.0 1.0590886920402158 0.0 21 9.833692590902655E-5 0.0 0.0 1.1062904164765486 0.0 22 9.833692590902655E-5 0.0 0.0 1.1498536746542474 0.0 23 9.833692590902655E-5 0.0 0.0 1.2011855499787591 0.0 24 9.833692590902655E-5 0.0 0.0 1.2388485926019164 0.0 25 9.833692590902655E-5 0.0 0.0 1.2698247242632597 0.0 26 9.833692590902655E-5 0.0 0.0 1.3056193652941455 0.0 27 9.833692590902655E-5 0.0 0.0 1.3387589093254875 0.0 28 1.966738518180531E-4 0.0 0.0 1.374356876504555 0.0 29 1.966738518180531E-4 0.0 0.0 1.411528234498167 0.0 30 1.966738518180531E-4 0.0 0.0 1.4653185329704046 0.0 31 1.966738518180531E-4 0.0 0.0 1.5153720282580991 0.0 32 1.966738518180531E-4 0.0 0.0 1.5604103403244332 0.0 33 1.966738518180531E-4 0.0 0.0 1.6046619569834952 0.0 34 1.966738518180531E-4 0.0 0.0 1.64861856286483 0.0 35 1.966738518180531E-4 0.0 0.0 1.7130292493352424 0.0 36 2.9501077772707963E-4 0.0 0.0 1.7608209953270293 0.0 37 2.9501077772707963E-4 0.0 0.0 1.8147096307251758 0.0 38 2.9501077772707963E-4 0.0 0.0 1.8623047028651447 0.0 39 2.9501077772707963E-4 0.0 0.0 1.9147182843746557 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCA 35 1.211738E-7 45.000004 37 TTAGCCG 35 1.211738E-7 45.000004 22 CATAGCG 35 1.211738E-7 45.000004 1 CGTCCTA 35 1.211738E-7 45.000004 42 TATCGTG 35 1.211738E-7 45.000004 1 AGCGTTG 25 3.890487E-5 45.0 1 CTAGACG 55 1.8189894E-12 45.0 1 TCGCATG 20 7.032904E-4 45.0 1 CGTATCT 20 7.032904E-4 45.0 44 ACGCATT 20 7.032904E-4 45.0 35 CGGCCTA 20 7.032904E-4 45.0 45 ATTACGC 25 3.890487E-5 45.0 18 AGCCACG 20 7.032904E-4 45.0 6 TAACGAC 25 3.890487E-5 45.0 23 CCGTACG 20 7.032904E-4 45.0 23 GCCGAAC 20 7.032904E-4 45.0 19 GTGTACG 50 2.1827873E-11 45.0 1 CTACCGC 20 7.032904E-4 45.0 25 GCGATAC 20 7.032904E-4 45.0 9 TATAGCG 50 2.1827873E-11 45.0 1 >>END_MODULE