##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545472_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1255486 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.905035978099317 31.0 31.0 33.0 28.0 34.0 2 31.200766874341888 31.0 31.0 34.0 28.0 34.0 3 31.27631291786607 31.0 31.0 34.0 28.0 34.0 4 35.11732588017708 35.0 35.0 37.0 32.0 37.0 5 34.98749328945126 35.0 35.0 37.0 32.0 37.0 6 35.036717255309895 37.0 35.0 37.0 32.0 37.0 7 35.55386758593883 37.0 35.0 37.0 35.0 37.0 8 35.469176080020006 37.0 35.0 37.0 35.0 37.0 9 37.15518452615163 39.0 37.0 39.0 34.0 39.0 10 36.52950650186462 39.0 35.0 39.0 32.0 39.0 11 36.22633306942491 38.0 35.0 39.0 31.0 39.0 12 35.48765020079873 37.0 35.0 39.0 30.0 39.0 13 35.05289585069049 37.0 34.0 39.0 29.0 39.0 14 35.9830312723519 38.0 34.0 40.0 29.0 41.0 15 36.339854048551715 38.0 35.0 40.0 30.0 41.0 16 36.436616577166134 38.0 35.0 40.0 31.0 41.0 17 36.35448025704787 38.0 35.0 40.0 31.0 41.0 18 36.27310220902503 38.0 35.0 40.0 30.0 41.0 19 36.18871735726245 37.0 35.0 40.0 30.0 41.0 20 36.05788435713341 37.0 34.0 40.0 30.0 41.0 21 35.868491564222936 37.0 34.0 40.0 30.0 41.0 22 35.77698437099259 37.0 34.0 40.0 30.0 41.0 23 35.71080760757189 37.0 34.0 40.0 30.0 41.0 24 35.5849312537137 36.0 34.0 40.0 29.0 41.0 25 35.44696794707388 36.0 34.0 40.0 29.0 41.0 26 35.30852753435721 36.0 34.0 40.0 29.0 41.0 27 35.19369869516665 36.0 34.0 40.0 28.0 41.0 28 35.228654879465005 36.0 34.0 40.0 28.0 41.0 29 35.25446480486441 36.0 34.0 40.0 29.0 41.0 30 35.128970773071146 36.0 34.0 40.0 27.0 41.0 31 34.94953428393467 36.0 34.0 40.0 27.0 41.0 32 34.73904607458785 36.0 33.0 40.0 26.0 41.0 33 34.4918254763494 36.0 33.0 40.0 24.0 41.0 34 34.2867813739062 36.0 33.0 40.0 24.0 41.0 35 34.113530537178434 36.0 33.0 40.0 23.0 41.0 36 33.91711496583793 36.0 33.0 40.0 23.0 41.0 37 33.85944964738754 36.0 33.0 40.0 23.0 41.0 38 33.810306924967705 35.0 33.0 40.0 23.0 41.0 39 33.74530819140954 35.0 33.0 40.0 23.0 41.0 40 33.58495913136427 35.0 32.0 40.0 22.0 41.0 41 33.538841532283115 35.0 32.0 40.0 21.0 41.0 42 33.503050611476354 35.0 32.0 40.0 22.0 41.0 43 33.38680638414128 35.0 32.0 40.0 21.0 41.0 44 33.31575103187132 35.0 32.0 40.0 21.0 41.0 45 33.29032661455405 35.0 32.0 39.0 22.0 41.0 46 33.2360814855761 35.0 32.0 39.0 22.0 41.0 47 33.15422872098932 35.0 32.0 39.0 21.0 41.0 48 33.10326280022238 35.0 32.0 39.0 21.0 41.0 49 33.12156487607189 35.0 32.0 39.0 20.0 41.0 50 33.01397865049869 35.0 32.0 39.0 20.0 41.0 51 32.82923903572003 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 2.0 13 16.0 14 18.0 15 70.0 16 213.0 17 525.0 18 1209.0 19 2321.0 20 3726.0 21 5687.0 22 8176.0 23 11551.0 24 15556.0 25 21024.0 26 26793.0 27 31029.0 28 32814.0 29 36649.0 30 42301.0 31 50627.0 32 61767.0 33 77412.0 34 119859.0 35 154717.0 36 94798.0 37 112410.0 38 149519.0 39 194646.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.76349875665679 23.584412729413152 26.43996030222559 16.21212821170447 2 33.911728207244046 24.59167206962085 27.807876790342544 13.68872293279256 3 28.789170090307657 24.802666059199385 32.68208486594036 13.726078984552595 4 26.059470197198536 27.361834381267492 31.188639299840858 15.390056121693114 5 23.140680182813668 30.810618358149753 30.980512725749232 15.06818873328735 6 21.54145884541922 39.15830204398934 28.877024514809403 10.423214595782031 7 83.43828605018295 5.1592769652548895 9.307789971373635 2.094647013188518 8 84.2108155726149 4.401562422838646 9.123239924618833 2.2643820799276138 9 79.57093906264188 5.744707627165894 10.994547131549059 3.689806178643171 10 47.56986537484289 22.322112711730757 17.473711375515137 12.634310537911214 11 41.37776128128868 23.43387341635032 22.3534153307962 12.834949971564797 12 35.950619919298184 22.9418727090545 27.119059870042356 13.988447501604956 13 22.07862134663389 35.941221168535535 27.37736621515493 14.602791269675647 14 17.179403035955797 37.58448919382614 30.450678064112225 14.785429706105843 15 16.432600602475855 23.150238234436703 45.6506086089371 14.766552554150344 16 18.467669093880776 20.238298157048344 43.17005526146846 18.12397748760241 17 19.50798336261814 19.33020360242966 30.93359862236616 30.22821441258604 18 22.661025292197603 23.23227817753444 34.79313986774842 19.313556662519535 19 29.187262940407145 23.37039202348732 28.46897536093592 18.973369675169614 20 30.19133626340716 23.588873153503904 27.444670828667146 18.775119754421794 21 24.009427424917522 26.616624956391387 30.706037343307692 18.6679102753834 22 23.99445314404143 24.46056746152486 27.751484285766626 23.79349510866708 23 20.361039469974177 28.762487196193348 28.219749164865238 22.656724168967237 24 19.311087499183582 24.510986183836376 38.17788489875634 18.0000414182237 25 19.382215333345016 24.894662306071115 36.127762476045135 19.595359884538734 26 18.228000949433127 31.19182531704854 29.4952711539595 21.084902579558833 27 19.134104243297017 30.88883508059827 30.90787153341415 19.06918914269056 28 16.954549871523856 28.0445182184429 36.630993893998024 18.369938016035224 29 18.201955258760353 25.165394118293634 36.666677286724024 19.96597333622199 30 19.75059857298289 28.743211792086885 32.822588224799006 18.683601410131214 31 27.112528534766618 26.518017723813724 28.054315221356514 18.315138520063144 32 28.81808319646734 25.062485762485604 28.200075508607824 17.91935553243923 33 27.343833384044107 26.013193297256997 27.262988197399252 19.37998512129964 34 21.04077624123248 26.684168521194184 30.049797448956024 22.225257788617316 35 20.96056825802916 26.291730851638327 30.994610851893214 21.7530900384393 36 28.375226804599972 26.039238987929775 27.348771710716008 18.236762496754245 37 21.485145991273498 31.470044269709103 28.51525226087746 18.529557478139942 38 21.367900558030914 32.321188766740526 25.695308430360832 20.615602244867727 39 21.149817680165288 31.425201077511016 26.703204974010063 20.721776268313626 40 23.974460886063245 26.637095116950725 26.65390135772123 22.734542639264795 41 19.05429451224466 25.647916424396612 27.792185655594725 27.505603407764006 42 22.15675841865222 25.77631291786607 26.571622463332922 25.495306200148786 43 22.011635334842445 26.895401462063294 27.414881567775346 23.67808163531891 44 19.745023042869455 29.920285849463873 29.168465438881835 21.16622566878484 45 18.853495777730693 33.790261301201284 25.663527908714233 21.69271501235378 46 21.192589961178378 31.798044741239647 26.71459498552752 20.294770312054457 47 21.397291566771752 28.498207068816377 28.45981556146385 21.644685802948022 48 22.40455090697945 26.356884903535367 30.64821113098832 20.59035305849687 49 21.350297812958487 26.417100628760497 31.586811800370533 20.64578975791048 50 20.154346603626006 32.59654030391418 27.293175710442014 19.9559373820178 51 19.29635216959807 32.777426430880155 26.33529963695334 21.590921762568442 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1016.0 1 1719.5 2 2423.0 3 8394.0 4 14365.0 5 10688.0 6 7011.0 7 7228.0 8 7445.0 9 7744.5 10 8044.0 11 7913.5 12 7783.0 13 7836.5 14 7890.0 15 7620.0 16 7350.0 17 7015.0 18 6680.0 19 6455.5 20 6231.0 21 6459.5 22 6688.0 23 6904.5 24 7121.0 25 8191.0 26 10255.0 27 11249.0 28 13415.5 29 15582.0 30 19096.5 31 22611.0 32 23904.0 33 25197.0 34 28896.0 35 32595.0 36 36844.0 37 41093.0 38 47052.5 39 53012.0 40 66662.0 41 80312.0 42 94716.5 43 109121.0 44 110883.0 45 112645.0 46 107565.5 47 102486.0 48 99153.0 49 95820.0 50 92556.5 51 89293.0 52 83073.5 53 76854.0 54 72156.5 55 67459.0 56 62613.5 57 57768.0 58 52477.0 59 47186.0 60 42573.0 61 37960.0 62 32648.5 63 27337.0 64 23146.0 65 18955.0 66 16253.0 67 13551.0 68 10524.0 69 7497.0 70 5937.0 71 4377.0 72 3545.0 73 2713.0 74 2151.5 75 1256.0 76 922.0 77 672.5 78 423.0 79 356.5 80 290.0 81 196.0 82 102.0 83 107.5 84 113.0 85 77.0 86 41.0 87 29.0 88 17.0 89 10.5 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1255486.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.825843080787177 #Duplication Level Percentage of deduplicated Percentage of total 1 79.72322031352486 15.805800558309684 2 5.8221370409844635 2.308575507387931 3 2.269590346518544 1.3498962620323813 4 1.2855973022843237 1.0195220152068925 5 0.8354415818647442 0.8281666852607515 6 0.6262986811530707 0.7450139624546843 7 0.5327995098252406 0.7394239632720883 8 0.4197569269541542 0.6657627972693204 9 0.3889980316280361 0.6940992540413276 >10 5.085120652487987 24.256161085328163 >50 2.2850593279828573 32.430074697852646 >100 0.7239591815489885 18.131869552927547 >500 0.0012126619456431969 0.1771097347734821 >1k 4.042206485477323E-4 0.24362606050288943 >5k 4.042206485477323E-4 0.6048978633802005 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7548 0.6012014470890157 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3040 0.24213730778359935 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006292383985165904 0.0 2 0.0 0.0 0.0 0.023576527336824145 0.0 3 0.0 0.0 0.0 0.034807237993892404 0.0 4 0.0 0.0 0.0 0.05718900887783695 0.0 5 0.0 0.0 0.0 0.0972531752643996 0.0 6 0.0 0.0 0.0 0.15396428156108471 0.0 7 0.0 0.0 0.0 0.18765641353228948 0.0 8 0.0 0.0 0.0 0.2966182020349092 0.0 9 0.0 0.0 0.0 0.3472758756370043 0.0 10 0.0 0.0 0.0 0.4252536467949463 0.0 11 0.0 0.0 0.0 0.48307985911431905 0.0 12 0.0 0.0 0.0 0.5363659969127493 0.0 13 0.0 0.0 0.0 0.5598628738193815 0.0 14 0.0 0.0 0.0 0.5701377793141461 0.0 15 0.0 0.0 0.0 0.5812091891108304 0.0 16 0.0 0.0 0.0 0.6081310345157174 0.0 17 0.0 0.0 0.0 0.6374423928263636 0.0 18 0.0 0.0 0.0 0.6890558715907624 0.0 19 0.0 0.0 0.0 0.711437642474707 0.0 20 0.0 0.0 0.0 0.7359699749738349 0.0 21 0.0 0.0 0.0 0.7674318948996643 0.0 22 0.0 0.0 0.0 0.8005664738595253 0.0 23 0.0 0.0 0.0 0.8366481187364893 0.0 24 0.0 0.0 0.0 0.8667559813490553 0.0 25 0.0 0.0 0.0 0.8939964284747102 0.0 26 7.965043019197347E-5 0.0 0.0 0.9229891850645885 0.0 27 7.965043019197347E-5 0.0 0.0 0.9525394946658107 0.0 28 7.965043019197347E-5 0.0 0.0 0.981372950395305 0.0 29 1.5930086038394695E-4 0.0 0.0 1.0164191396797735 0.0 30 1.5930086038394695E-4 0.0 0.0 1.0671564637120605 0.0 31 1.5930086038394695E-4 0.0 0.0 1.1100880455855342 0.0 32 1.5930086038394695E-4 0.0 0.0 1.152541724877856 0.0 33 1.5930086038394695E-4 0.0 0.0 1.194836103309794 0.0 34 1.5930086038394695E-4 0.0 0.0 1.2376880347530756 0.0 35 1.5930086038394695E-4 0.0 0.0 1.2967090035253281 0.0 36 2.389512905759204E-4 0.0 0.0 1.3464108719651195 0.0 37 2.389512905759204E-4 0.0 0.0 1.3969092447068308 0.0 38 3.186017207678939E-4 0.0 0.0 1.4553726604677393 0.0 39 3.186017207678939E-4 0.0 0.0 1.5720605406989803 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGCGTA 25 3.891011E-5 45.000004 23 GAACGGC 25 3.891011E-5 45.000004 3 ACGTCGT 25 3.891011E-5 45.000004 32 AGTCGGT 25 3.891011E-5 45.000004 12 GCGATCG 20 7.0335355E-4 45.0 9 TCGCGGA 20 7.0335355E-4 45.0 23 TACGGGA 180 0.0 42.499996 4 CGTTTTT 6685 0.0 41.97083 1 GCGATAC 65 0.0 41.538464 9 TCGACAA 190 0.0 41.44737 19 CGAGGGC 350 0.0 39.857143 4 TCATCGA 200 0.0 39.375004 16 ACGGGAC 160 0.0 39.375 5 ATCGATA 40 3.4585537E-7 39.375 40 GCGATGC 220 0.0 38.86364 9 TGGGCGA 825 0.0 38.727272 6 CGACGGT 70 0.0 38.57143 28 ACCGAAT 35 6.248749E-6 38.57143 26 CGCAGAT 35 6.248749E-6 38.57143 27 GCGATGA 290 0.0 38.01724 9 >>END_MODULE