##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545470_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 826864 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.904955349368215 31.0 31.0 33.0 28.0 34.0 2 31.185020753110546 31.0 31.0 34.0 28.0 34.0 3 31.27569346349581 31.0 31.0 34.0 28.0 34.0 4 35.111613276185686 35.0 35.0 37.0 32.0 37.0 5 34.962199345962574 35.0 35.0 37.0 32.0 37.0 6 35.02211367286519 37.0 35.0 37.0 32.0 37.0 7 35.541706979624216 37.0 35.0 37.0 35.0 37.0 8 35.476493111321815 37.0 35.0 37.0 35.0 37.0 9 37.160023897521235 39.0 37.0 39.0 34.0 39.0 10 36.580463050755625 39.0 35.0 39.0 32.0 39.0 11 36.23560827415391 38.0 35.0 39.0 32.0 39.0 12 35.16471995394648 37.0 34.0 39.0 30.0 39.0 13 34.54585518295632 37.0 33.0 39.0 26.0 39.0 14 35.46829466514445 37.0 33.0 40.0 27.0 41.0 15 35.92562622148262 37.0 34.0 40.0 30.0 41.0 16 36.12477142553068 37.0 34.0 40.0 31.0 41.0 17 36.05141595232106 37.0 34.0 40.0 31.0 41.0 18 36.02136868940963 37.0 34.0 40.0 30.0 41.0 19 35.90171176880357 37.0 34.0 40.0 30.0 41.0 20 35.720082141682305 36.0 34.0 40.0 30.0 41.0 21 35.528084425008224 36.0 34.0 40.0 29.0 41.0 22 35.42251567367789 35.0 34.0 40.0 29.0 41.0 23 35.422543489618604 35.0 34.0 40.0 29.0 41.0 24 35.30582538361811 35.0 34.0 40.0 29.0 41.0 25 35.166648928965344 35.0 34.0 40.0 29.0 41.0 26 34.98633027922367 35.0 34.0 40.0 29.0 41.0 27 34.84799797790205 35.0 34.0 40.0 27.0 41.0 28 34.915740678031696 36.0 34.0 40.0 28.0 41.0 29 34.99443560246909 36.0 34.0 40.0 29.0 41.0 30 34.92559961493063 36.0 34.0 40.0 29.0 41.0 31 34.720821078194234 35.0 34.0 40.0 27.0 41.0 32 34.468736092029644 35.0 33.0 40.0 26.0 41.0 33 34.20905009771861 35.0 33.0 40.0 24.0 41.0 34 34.06086127827551 35.0 33.0 40.0 24.0 41.0 35 33.87511852009521 35.0 33.0 40.0 23.0 41.0 36 33.63617596122216 35.0 33.0 40.0 23.0 41.0 37 33.608477331217706 35.0 33.0 40.0 23.0 41.0 38 33.61871117862188 35.0 33.0 40.0 23.0 41.0 39 33.587724220669905 35.0 33.0 40.0 23.0 41.0 40 33.423888329882544 35.0 32.0 39.0 23.0 41.0 41 33.41431722750053 35.0 32.0 39.0 23.0 41.0 42 33.36595619110277 35.0 32.0 39.0 23.0 41.0 43 33.2427605990828 35.0 32.0 39.0 23.0 41.0 44 33.17308408637938 35.0 32.0 39.0 22.0 41.0 45 33.136536359062674 35.0 32.0 39.0 23.0 41.0 46 33.08009418719403 35.0 32.0 39.0 23.0 41.0 47 33.008397995317246 35.0 32.0 39.0 22.0 41.0 48 33.00534428878268 35.0 32.0 39.0 22.0 41.0 49 33.05104346059328 35.0 32.0 39.0 22.0 40.0 50 32.92545086011726 35.0 32.0 39.0 22.0 40.0 51 32.708811848139476 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 1.0 13 2.0 14 14.0 15 40.0 16 145.0 17 311.0 18 661.0 19 1390.0 20 2306.0 21 3613.0 22 5331.0 23 7470.0 24 10292.0 25 13739.0 26 17951.0 27 20746.0 28 22696.0 29 24986.0 30 28822.0 31 35174.0 32 42850.0 33 54373.0 34 90450.0 35 121745.0 36 56227.0 37 64746.0 38 85704.0 39 115037.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.63668511387604 23.321489386404537 27.065273128350007 16.976552371369415 2 30.732260686158785 27.310899978714758 29.28002670330308 12.67681263182337 3 28.70871146887517 25.211763966021017 32.88811703012829 13.191407534975522 4 26.69701426111186 27.30509491282726 31.459587066313205 14.538303759747674 5 22.237756148532288 32.20940807678167 31.423789160006965 14.129046614679078 6 20.66155982120397 40.229711294723195 28.59696395054084 10.511764933531996 7 84.18990305539968 5.508765649490122 8.523287989318678 1.7780433057915206 8 86.45242748505196 3.670615723988467 8.123585015189922 1.7533717757696548 9 81.47942104142882 5.555568993208073 9.879012751794733 3.085997213568374 10 54.95413997948877 20.11673019988777 14.852019195417867 10.077110625205595 11 49.28271154627605 19.676391764546526 19.061901352580353 11.97899533659707 12 44.060691963853785 20.64341899030554 23.26464811625612 12.03124092958455 13 21.39505408386385 42.500822384334064 22.737596509220378 13.366527022581707 14 15.069588227326381 43.65905396776253 28.301994040132357 12.96936376477873 15 13.95054083863852 21.63826215677548 51.52794171713849 12.883255287447511 16 15.877459896669826 16.55677354437973 48.75033862884344 18.815427930107006 17 15.184842972967743 16.952485535710828 31.327159000754655 36.53551249056677 18 21.711309235859826 21.26250507943265 37.03837632307126 19.987809361636256 19 31.525135935292862 21.920412546682407 26.76691692950715 19.78753458851758 20 33.33583273670156 21.690265872017648 25.848023375065303 19.125878016215484 21 22.036271986687048 28.15251359352929 28.580516263859597 21.23069815592407 22 22.305240039474448 24.886922154066447 25.920586698659033 26.887251107800076 23 19.57335184504344 29.697870508330272 26.14529112405426 24.58348652257203 24 19.25117068828731 22.569491476228254 42.25531647284197 15.924021362642465 25 17.01368060527487 24.598724820526712 38.757280520133904 19.630314054064513 26 16.37161613034308 34.72590413901197 28.338517579674527 20.563962150970415 27 18.04129820623464 35.07759438069622 28.745476886162656 18.13563052690648 28 14.882616730199889 28.966674084250855 39.63118481394764 16.51952437160162 29 15.020003289537337 24.73272509142979 39.258451208421214 20.988820410611662 30 17.653689119371503 31.342881054199967 32.533040500009676 18.470389326418854 31 30.043997561872327 27.34403722982256 25.077763695117937 17.534201513187174 32 32.18497842450512 25.82359372278875 26.50714023104162 15.484287621664505 33 29.37641498481008 27.0710781942375 24.62303353393061 18.929473287021807 34 19.046904932370982 27.61796377638886 28.729150138354072 24.605981152886088 35 20.71441010855473 25.269814624895993 32.10527970742468 21.910495559124595 36 30.79442326670408 26.46795603630101 25.528502873507612 17.209117823487297 37 20.919280558834345 35.13431471197198 27.83432341957081 16.112081309622862 38 20.454996226707173 35.52458445403355 23.780815224752804 20.239604094506472 39 21.249927436676405 33.53743783741945 26.053740397453513 19.15889432845063 40 24.674190677064185 26.53181176106349 24.969644342963292 23.82435321890903 41 17.041012790495174 25.195316279339767 26.883260125002415 30.88041080516264 42 20.94903152150777 25.989400917200413 23.778517386172332 29.283050175119484 43 21.452016292884924 26.019514696491807 26.404100311538535 26.124368699084734 44 19.87533621006598 28.89459451614776 29.614785502815455 21.6152837709708 45 16.850292188316338 38.920185181601816 23.049135045182762 21.180387584899087 46 20.98664351090385 35.416706979624216 24.86515315698833 18.7314963524836 47 21.36772189864355 28.469857195379166 26.67318930319859 23.48923160277869 48 22.56840302637435 23.85543450918168 32.10721472938718 21.468947735056794 49 21.053401768610076 24.088846533408155 33.784153137638114 21.073598560343658 50 19.95164863871205 35.12004392499855 26.20987248205267 18.71843495423673 51 17.86666247411908 35.53377580835542 24.455291317556455 22.14427039996904 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 606.0 1 1035.0 2 1464.0 3 5058.0 4 8652.0 5 6489.5 6 4327.0 7 4503.0 8 4679.0 9 4901.0 10 5123.0 11 5306.0 12 5489.0 13 5252.0 14 5015.0 15 4701.0 16 4387.0 17 4116.5 18 3846.0 19 3855.0 20 3864.0 21 3529.5 22 3195.0 23 3428.5 24 3662.0 25 4205.0 26 5331.5 27 5915.0 28 7703.5 29 9492.0 30 10681.0 31 11870.0 32 13608.5 33 15347.0 34 18175.0 35 21003.0 36 22089.5 37 23176.0 38 28337.5 39 33499.0 40 46583.0 41 59667.0 42 69733.0 43 79799.0 44 84931.0 45 90063.0 46 82624.0 47 75185.0 48 68639.5 49 62094.0 50 58400.5 51 54707.0 52 52434.0 53 50161.0 54 45937.0 55 41713.0 56 37858.0 57 34003.0 58 32091.5 59 30180.0 60 28003.0 61 25826.0 62 21589.0 63 17352.0 64 14237.5 65 11123.0 66 8895.5 67 6668.0 68 5226.0 69 3784.0 70 3035.5 71 2287.0 72 1789.0 73 1291.0 74 1037.5 75 621.0 76 458.0 77 327.5 78 197.0 79 135.0 80 73.0 81 59.0 82 45.0 83 36.5 84 28.0 85 19.5 86 11.0 87 6.5 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 826864.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.329946213406835 #Duplication Level Percentage of deduplicated Percentage of total 1 80.67236707351374 15.593925164392331 2 5.444859105538007 2.1049766729925623 3 1.8698187432220867 1.0843048720590873 4 0.9753587800362105 0.7541453102749621 5 0.704820337249912 0.6812069604578033 6 0.5488837816381612 0.6365936385886198 7 0.4610195217243204 0.6238037790783161 8 0.38300115798086315 0.5922713426754095 9 0.36011439672231443 0.6264892727384209 >10 5.5162931332856395 26.330284328855 >50 2.403833525080667 33.1333475901396 >100 0.6546237613211086 16.30337468108589 >500 0.003129176679355203 0.4018744115113924 >1k 0.0018775060076131219 1.1334019751505826 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4960 0.5998568083747751 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3213 0.38857659784438553 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1196 0.14464289169682076 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007981965595309507 0.0 2 0.0 0.0 0.0 0.024550591149209544 0.0 3 0.0 0.0 0.0 0.033379128853112484 0.0 4 0.0 0.0 0.0 0.059380986474196484 0.0 5 0.0 0.0 0.0 0.09941175332340021 0.0 6 0.0 0.0 0.0 0.15129452969291202 0.0 7 0.0 0.0 0.0 0.18165018672961938 0.0 8 0.0 0.0 0.0 0.28807639466707946 0.0 9 0.0 0.0 0.0 0.32883279475222044 0.0 10 0.0 0.0 0.0 0.4005495462373498 0.0 11 0.0 0.0 0.0 0.4521904448615492 0.0 12 0.0 0.0 0.0 0.5154414752607442 0.0 13 0.0 0.0 0.0 0.5402339441552662 0.0 14 0.0 0.0 0.0 0.5488206041138567 0.0 15 0.0 0.0 0.0 0.5621238801060392 0.0 16 0.0 0.0 0.0 0.5905445151802473 0.0 17 0.0 0.0 0.0 0.6198117223630488 0.0 18 0.0 0.0 0.0 0.67012229338803 0.0 19 0.0 0.0 0.0 0.6901981462489599 0.0 20 0.0 0.0 0.0 0.7169256371059811 0.0 21 0.0 0.0 0.0 0.7482488051239382 0.0 22 0.0 0.0 0.0 0.7787254010333017 0.0 23 0.0 0.0 0.0 0.8189980456278179 0.0 24 0.0 0.0 0.0 0.8464511697207764 0.0 25 0.0 0.0 0.0 0.8714855163606107 0.0 26 0.0 0.0 0.0 0.900631784670756 0.0 27 0.0 0.0 0.0 0.9249404980746532 0.0 28 0.0 0.0 0.0 0.9493701503512065 0.0 29 0.0 0.0 0.0 0.9783954797886956 0.0 30 0.0 0.0 0.0 1.0220544128175855 0.0 31 1.2093887265620465E-4 0.0 0.0 1.0594245244683527 0.0 32 1.2093887265620465E-4 0.0 0.0 1.0946177364113083 0.0 33 1.2093887265620465E-4 0.0 0.0 1.132350664680044 0.0 34 1.2093887265620465E-4 0.0 0.0 1.1709301650573734 0.0 35 2.418777453124093E-4 0.0 0.0 1.2242642078987596 0.0 36 2.418777453124093E-4 0.0 0.0 1.2678022020549933 0.0 37 2.418777453124093E-4 0.0 0.0 1.3096470519940402 0.0 38 2.418777453124093E-4 0.0 0.0 1.3554828847307416 0.0 39 2.418777453124093E-4 0.0 0.0 1.40301186168463 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGT 20 7.032136E-4 45.000004 14 CTATGCG 20 7.032136E-4 45.000004 1 ACACGCG 20 7.032136E-4 45.000004 36 CGAACAC 20 7.032136E-4 45.000004 15 TTGTGCG 20 7.032136E-4 45.000004 1 CCCTAGT 20 7.032136E-4 45.000004 26 TTCCGCG 20 7.032136E-4 45.000004 1 CGTTAGA 20 7.032136E-4 45.000004 13 ACGATAT 20 7.032136E-4 45.000004 30 CCGTAAG 30 2.1647593E-6 45.000004 1 CATAGAC 20 7.032136E-4 45.000004 17 GTCGTGA 20 7.032136E-4 45.000004 30 TCCGTCG 20 7.032136E-4 45.000004 26 TAGATTA 20 7.032136E-4 45.000004 44 ACGTCAC 20 7.032136E-4 45.000004 42 CATCGAA 20 7.032136E-4 45.000004 9 CACGTCG 20 7.032136E-4 45.000004 28 TCGGTAC 40 6.8102963E-9 45.000004 36 TACAAGT 30 2.1647593E-6 45.000004 45 GGTAATC 25 3.889852E-5 45.0 8 >>END_MODULE