SRR1545469_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545469_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1166798
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5771	0.4946014648636697	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1514	0.12975682166064734	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGTTG	25	3.8908413E-5	45.000004	1
CCGCTAA	20	7.03333E-4	45.0	28
GCGATCG	20	7.03333E-4	45.0	9
TCGTAGT	20	7.03333E-4	45.0	13
TATCGCG	40	6.8157533E-9	45.0	1
ACGGGTA	90	0.0	42.500004	5
CGTTTTT	5445	0.0	40.7438	1
TATTACG	45	1.9283107E-8	40.000004	1
AGCGGGT	225	0.0	40.0	4
GCGATGA	245	0.0	39.489796	9
GCGCGAC	200	0.0	39.375004	9
CGCGACC	200	0.0	39.375004	10
CGCATCG	40	3.4582808E-7	39.375	21
GCGTAAC	40	3.4582808E-7	39.375	32
GCCCGAA	40	3.4582808E-7	39.375	25
CCCGAAG	40	3.4582808E-7	39.375	26
ACCCGCT	215	0.0	38.720932	34
TAGGGCG	530	0.0	38.632076	5
ACGGGTC	70	0.0	38.571426	5
TAGCGGG	760	0.0	38.19079	3