##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545469_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1166798 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.963200999658895 31.0 31.0 33.0 30.0 34.0 2 31.249467345675942 31.0 31.0 34.0 30.0 34.0 3 31.340245698055703 31.0 31.0 34.0 28.0 34.0 4 35.18666555822002 37.0 35.0 37.0 32.0 37.0 5 35.056538492523984 37.0 35.0 37.0 32.0 37.0 6 35.10415770338996 37.0 35.0 37.0 32.0 37.0 7 35.58779925916911 37.0 35.0 37.0 35.0 37.0 8 35.50080819473465 37.0 35.0 37.0 35.0 37.0 9 37.17605875224332 39.0 37.0 39.0 34.0 39.0 10 36.581343128802075 39.0 35.0 39.0 32.0 39.0 11 36.328411601665415 38.0 35.0 39.0 32.0 39.0 12 35.795007362028386 37.0 35.0 39.0 31.0 39.0 13 35.455510722507235 37.0 35.0 39.0 30.0 39.0 14 36.48627783043852 38.0 35.0 40.0 30.0 41.0 15 36.73534407840946 38.0 35.0 40.0 31.0 41.0 16 36.77710280614125 38.0 35.0 40.0 31.0 41.0 17 36.7019492662826 38.0 35.0 40.0 31.0 41.0 18 36.588283490372795 38.0 35.0 40.0 31.0 41.0 19 36.5534505544233 38.0 35.0 40.0 31.0 41.0 20 36.43877089264809 38.0 35.0 40.0 31.0 41.0 21 36.26610261587695 38.0 35.0 40.0 30.0 41.0 22 36.199826362403776 38.0 34.0 40.0 30.0 41.0 23 36.114867354932045 38.0 34.0 40.0 30.0 41.0 24 36.014575787754175 38.0 34.0 40.0 30.0 41.0 25 35.87655789605399 37.0 34.0 40.0 30.0 41.0 26 35.74459075178394 37.0 34.0 40.0 30.0 41.0 27 35.641664624039464 37.0 34.0 40.0 29.0 41.0 28 35.6514126695452 37.0 34.0 40.0 29.0 41.0 29 35.675208562236136 37.0 34.0 40.0 29.0 41.0 30 35.551274513669036 37.0 34.0 40.0 29.0 41.0 31 35.425894627861894 37.0 34.0 40.0 29.0 41.0 32 35.22756552548085 37.0 34.0 40.0 27.0 41.0 33 34.98901609361689 37.0 34.0 40.0 26.0 41.0 34 34.800800995545075 37.0 34.0 40.0 25.0 41.0 35 34.63484253486893 37.0 33.0 40.0 24.0 41.0 36 34.48390381197088 37.0 33.0 40.0 24.0 41.0 37 34.4464551704751 37.0 33.0 40.0 23.0 41.0 38 34.38623309261757 37.0 33.0 40.0 23.0 41.0 39 34.30429003135075 37.0 33.0 40.0 23.0 41.0 40 34.184161268702894 37.0 33.0 40.0 23.0 41.0 41 34.10827838237638 36.0 33.0 40.0 23.0 41.0 42 34.075984017799136 36.0 33.0 40.0 23.0 41.0 43 33.99512683429351 36.0 33.0 40.0 23.0 41.0 44 33.913207770325286 36.0 33.0 40.0 23.0 41.0 45 33.85741405110396 36.0 33.0 40.0 23.0 41.0 46 33.80244738163761 36.0 33.0 40.0 23.0 41.0 47 33.713678803014744 36.0 33.0 40.0 23.0 41.0 48 33.65881155092827 35.0 33.0 40.0 23.0 41.0 49 33.66753971124393 36.0 33.0 40.0 23.0 41.0 50 33.581278850323706 35.0 32.0 40.0 22.0 41.0 51 33.39796262934973 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 8.0 14 21.0 15 46.0 16 167.0 17 368.0 18 879.0 19 1686.0 20 2911.0 21 4346.0 22 6554.0 23 9085.0 24 12607.0 25 17054.0 26 22136.0 27 25166.0 28 27670.0 29 30797.0 30 36227.0 31 43570.0 32 53640.0 33 67499.0 34 102055.0 35 131378.0 36 93476.0 37 113361.0 38 155011.0 39 209019.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.087221609910195 23.51281027221507 25.877058411138858 15.522909706735872 2 34.13881408778555 24.915623784065453 27.433368929326242 13.51219319882276 3 30.364724656710074 24.594831324702305 31.520108879171886 13.520335139415735 4 26.180967056851312 28.31235569481607 30.2608506356713 15.245826612661318 5 22.92830464227741 31.465600729517877 30.411862207511497 15.194232420693213 6 21.58531296762593 40.18193380516593 28.691598717172983 9.541154510035156 7 84.39549947805875 4.832884526713278 8.69233577705824 2.079280218169726 8 84.69289457129683 4.362623178990708 8.735445209882089 2.2090370398303736 9 79.25707791751442 6.03129247736112 10.963851497859956 3.7477781072644967 10 43.50933066391955 25.648569846708686 17.89401421668532 12.948085272686447 11 36.66264426233161 25.625086775945793 23.4737289573688 14.238540004353794 12 32.34158783268398 24.024381255367253 28.44391231387095 15.190118598077817 13 22.327258017240347 33.18860676826666 28.690570261519134 15.793564952973865 14 18.464892809209477 35.38401677068353 30.684917183608473 15.46617323649852 15 17.177780558417137 24.75175651655214 42.68279513677603 15.387667788254694 16 19.316625499872302 22.35811168685582 40.43776214906094 17.887500664210943 17 20.391361658144767 20.743522014950315 31.367554623850914 27.497561703053996 18 22.11428199225573 23.38365338301917 35.10504817457692 19.397016450148183 19 28.499706033092277 24.931136323511012 28.039557832632557 18.52959981076416 20 29.967569365048618 24.082231885896274 27.81681147893637 18.133387270118735 21 24.100058450562994 27.645230794019188 30.040504011834095 18.214206743583723 22 23.60931369440126 25.6507124626542 28.384518999861157 22.35545484308338 23 21.473896938458928 28.68937039658964 28.29975711305642 21.536975551895015 24 19.82913923404051 24.682250055279493 36.67927096206884 18.809339748611155 25 20.097137636506062 26.077692968277283 34.44246561958454 19.382703775632116 26 18.85519172984527 31.12586754519634 29.743280327871663 20.275660397086728 27 19.332309448593502 31.954288574371915 30.403291743729422 18.310110233305167 28 18.29631178661602 28.424885884274744 35.55371195356866 17.72509037554058 29 19.25577520701955 26.36300370758263 34.95326526099633 19.427955824401483 30 20.174443219820397 28.955826115574418 31.22485640187933 19.644874262725853 31 25.688679617208805 27.075980589613625 28.352122646764904 18.88321714641266 32 27.86300627872177 26.185766516569274 28.71388192300638 17.237345281702574 33 26.173510753360908 27.306097542162394 27.555840856772125 18.964550847704572 34 20.652160871033377 27.714908664567474 30.105639536577883 21.52729092782127 35 21.654990838174218 27.191424736758208 30.586785373303695 20.566799051763887 36 26.97759166539538 27.720222352112362 26.6888527405772 18.613333241915054 37 22.57871542460649 31.48925520955641 28.07443962022561 17.857589745611495 38 21.51306395794302 32.79230852298342 26.03535487719382 19.659272641879745 39 21.637764205972243 30.686031343900144 27.940054748122638 19.736149702004973 40 23.32905952872734 27.839523207958877 27.234277055668592 21.597140207645197 41 19.057368970464466 26.574351344448655 29.115750969747978 25.2525287153389 42 21.8707094115691 27.20608022982556 26.677454023747043 24.245756334858303 43 21.06380024648654 27.832923950846677 27.692796868009715 23.41047893465707 44 19.81431233169752 30.127922742411283 29.679773191246472 20.37799173464473 45 19.106220614022305 33.4384357875142 26.704450984660582 20.750892613802904 46 20.686271316886042 31.907151023570492 27.52421584541626 19.882361814127208 47 21.176844663772133 28.52696010791928 28.350579963284133 21.94561526502445 48 21.487952499061535 26.964907378997903 30.538705071486238 21.00843505045432 49 21.10065324074947 27.594836466980578 31.102127360519987 20.20238293174997 50 19.928813727826068 32.737200440864655 27.31689632652781 20.017089504781463 51 19.34576507673136 32.66212317813366 26.89094427655858 21.101167468576396 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 754.0 1 1479.5 2 2205.0 3 6912.5 4 11620.0 5 8921.5 6 6223.0 7 6427.5 8 6632.0 9 6908.5 10 7185.0 11 7243.5 12 7302.0 13 7144.0 14 6986.0 15 6850.5 16 6715.0 17 6952.0 18 7189.0 19 7031.0 20 6873.0 21 7063.5 22 7254.0 23 7791.0 24 8328.0 25 9594.0 26 11820.0 27 12780.0 28 15200.0 29 17620.0 30 20220.5 31 22821.0 32 25390.0 33 27959.0 34 31558.0 35 35157.0 36 39532.5 37 43908.0 38 49958.5 39 56009.0 40 66305.5 41 76602.0 42 87631.0 43 98660.0 44 97276.5 45 95893.0 46 95462.5 47 95032.0 48 89376.0 49 83720.0 50 80994.0 51 78268.0 52 72251.5 53 66235.0 54 62567.5 55 58900.0 56 54359.0 57 49818.0 58 46925.0 59 44032.0 60 40168.0 61 36304.0 62 31288.5 63 26273.0 64 21457.5 65 16642.0 66 14073.0 67 11504.0 68 9356.0 69 7208.0 70 5606.0 71 4004.0 72 3135.5 73 2267.0 74 1842.0 75 1113.5 76 810.0 77 614.0 78 418.0 79 321.5 80 225.0 81 155.5 82 86.0 83 66.5 84 47.0 85 33.0 86 19.0 87 18.0 88 17.0 89 11.0 90 5.0 91 5.0 92 5.0 93 4.0 94 3.0 95 3.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1166798.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.584897746918447 #Duplication Level Percentage of deduplicated Percentage of total 1 77.3963667778591 15.931962961052257 2 5.594255847812812 2.3031436919465462 3 2.2700346125554733 1.4018529114426017 4 1.4584441076466879 1.2008769130201116 5 1.0468615521758877 1.0774769003360491 6 0.8136458196368278 1.004928959965905 7 0.6629339780157746 0.9552499705288822 8 0.5697616042745036 0.9382787491288695 9 0.492309401882523 0.9120724827838486 >10 7.237876040982193 36.76965050810489 >50 2.264190022597814 31.90955042187067 >100 0.19206490836198803 4.900614270087628 >500 4.184420661481221E-4 0.06684143624262662 >1k 4.184420661481221E-4 0.13040970937027926 >5k 4.184420661481221E-4 0.49709011411881215 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5771 0.4946014648636697 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1514 0.12975682166064734 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.005742210733991659 0.0 2 0.0 0.0 0.0 0.021854682644296613 0.0 3 0.0 0.0 0.0 0.03128219280458143 0.0 4 0.0 0.0 0.0 0.04988009921168874 0.0 5 0.0 0.0 0.0 0.08253356622140251 0.0 6 0.0 0.0 0.0 0.14106983385298913 0.0 7 0.0 0.0 0.0 0.17706578173771295 0.0 8 0.0 0.0 0.0 0.28411087437585597 0.0 9 0.0 0.0 0.0 0.33099131126381776 0.0 10 0.0 0.0 0.0 0.3999835447095384 0.0 11 0.0 0.0 0.0 0.44634975377057556 0.0 12 0.0 0.0 0.0 0.4991438106681705 0.0 13 8.570463782077103E-5 0.0 0.0 0.5238267463605526 0.0 14 8.570463782077103E-5 0.0 0.0 0.535653986379819 0.0 15 8.570463782077103E-5 0.0 0.0 0.5461956568317738 0.0 16 8.570463782077103E-5 0.0 0.0 0.5711357064376181 0.0 17 8.570463782077103E-5 0.0 0.0 0.5978755534376987 0.0 18 8.570463782077103E-5 0.0 0.0 0.6477556526493875 0.0 19 8.570463782077103E-5 0.0 0.0 0.6690104028289386 0.0 20 8.570463782077103E-5 0.0 0.0 0.692836292143113 0.0 21 8.570463782077103E-5 0.0 0.0 0.7199189576944767 0.0 22 8.570463782077103E-5 0.0 0.0 0.746401690781095 0.0 23 8.570463782077103E-5 0.0 0.0 0.7799122041690164 0.0 24 8.570463782077103E-5 0.0 0.0 0.8082804392876917 0.0 25 8.570463782077103E-5 0.0 0.0 0.8325348517909699 0.0 26 8.570463782077103E-5 0.0 0.0 0.8598746312557958 0.0 27 8.570463782077103E-5 0.0 0.0 0.8864430689802348 0.0 28 8.570463782077103E-5 0.0 0.0 0.9094976165540222 0.0 29 8.570463782077103E-5 0.0 0.0 0.9406084000829621 0.0 30 8.570463782077103E-5 0.0 0.0 0.98817447407349 0.0 31 8.570463782077103E-5 0.0 0.0 1.0236561941312892 0.0 32 8.570463782077103E-5 0.0 0.0 1.0601663698429378 0.0 33 8.570463782077103E-5 0.0 0.0 1.0970193641058692 0.0 34 8.570463782077103E-5 0.0 0.0 1.1370434299681693 0.0 35 8.570463782077103E-5 0.0 0.0 1.1817812509106118 0.0 36 8.570463782077103E-5 0.0 0.0 1.2203483379299587 0.0 37 8.570463782077103E-5 0.0 0.0 1.2634577707538066 0.0 38 8.570463782077103E-5 0.0 0.0 1.311538072571259 0.0 39 8.570463782077103E-5 0.0 0.0 1.3859296981996885 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGTTG 25 3.8908413E-5 45.000004 1 CCGCTAA 20 7.03333E-4 45.0 28 GCGATCG 20 7.03333E-4 45.0 9 TCGTAGT 20 7.03333E-4 45.0 13 TATCGCG 40 6.8157533E-9 45.0 1 ACGGGTA 90 0.0 42.500004 5 CGTTTTT 5445 0.0 40.7438 1 TATTACG 45 1.9283107E-8 40.000004 1 AGCGGGT 225 0.0 40.0 4 GCGATGA 245 0.0 39.489796 9 GCGCGAC 200 0.0 39.375004 9 CGCGACC 200 0.0 39.375004 10 CGCATCG 40 3.4582808E-7 39.375 21 GCGTAAC 40 3.4582808E-7 39.375 32 GCCCGAA 40 3.4582808E-7 39.375 25 CCCGAAG 40 3.4582808E-7 39.375 26 ACCCGCT 215 0.0 38.720932 34 TAGGGCG 530 0.0 38.632076 5 ACGGGTC 70 0.0 38.571426 5 TAGCGGG 760 0.0 38.19079 3 >>END_MODULE