SRR1545468_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545468_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1290741
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7062	0.5471275802039294	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4909	0.3803241703796501	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATGCG	45	3.8562575E-10	45.000004	1
CACGCAT	35	1.2120836E-7	45.000004	42
CATTACG	35	1.2120836E-7	45.000004	29
TCGAATA	35	1.2120836E-7	45.000004	25
TAACTCG	35	1.2120836E-7	45.000004	38
CTTACGT	45	3.8562575E-10	45.000004	22
TCGCCTA	20	7.0336094E-4	45.0	27
TAATACG	25	3.891073E-5	45.0	1
GGTACGA	25	3.891073E-5	45.0	7
TCACCGT	25	3.891073E-5	45.0	15
ACGCACC	25	3.891073E-5	45.0	20
CACGCTA	20	7.0336094E-4	45.0	30
ATTCGGT	20	7.0336094E-4	45.0	44
TTCGTCA	20	7.0336094E-4	45.0	27
TTCGTAG	40	6.8157533E-9	45.0	1
TTGTACG	25	3.891073E-5	45.0	1
GTCTACG	20	7.0336094E-4	45.0	32
TAAGTCC	25	3.891073E-5	45.0	43
TAACGGC	25	3.891073E-5	45.0	18
ACTTACG	20	7.0336094E-4	45.0	1