##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545468_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1290741 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.029668229334934 31.0 31.0 33.0 30.0 34.0 2 31.324986190103203 31.0 31.0 34.0 30.0 34.0 3 31.388795273412715 31.0 31.0 34.0 28.0 34.0 4 35.210465926161795 37.0 35.0 37.0 33.0 37.0 5 35.08395797452781 37.0 35.0 37.0 32.0 37.0 6 35.133464420824936 37.0 35.0 37.0 32.0 37.0 7 35.6452053510348 37.0 35.0 37.0 35.0 37.0 8 35.59398283621579 37.0 35.0 37.0 35.0 37.0 9 37.310692850076045 39.0 37.0 39.0 35.0 39.0 10 36.75994176988257 39.0 37.0 39.0 32.0 39.0 11 36.41058508252237 38.0 35.0 39.0 32.0 39.0 12 35.19710538365172 37.0 35.0 39.0 30.0 39.0 13 34.50432038650666 35.0 33.0 39.0 26.0 39.0 14 35.37191737149436 37.0 33.0 40.0 27.0 41.0 15 35.85132261235988 37.0 34.0 40.0 30.0 41.0 16 36.08166161917844 37.0 34.0 40.0 31.0 41.0 17 36.017714630588166 36.0 34.0 40.0 31.0 41.0 18 35.962071399296995 36.0 34.0 40.0 31.0 41.0 19 35.83723070701248 36.0 34.0 40.0 30.0 41.0 20 35.66008672537713 36.0 34.0 40.0 30.0 41.0 21 35.457512390169676 35.0 34.0 40.0 30.0 41.0 22 35.35240919750748 35.0 34.0 40.0 30.0 41.0 23 35.33514856969756 35.0 34.0 40.0 30.0 41.0 24 35.24659478547594 35.0 34.0 40.0 29.0 41.0 25 35.12658310226451 35.0 34.0 40.0 29.0 41.0 26 34.975855729383355 35.0 34.0 40.0 29.0 41.0 27 34.88264260606892 35.0 34.0 40.0 29.0 41.0 28 34.94240052806876 35.0 34.0 40.0 29.0 41.0 29 35.06208759154625 35.0 34.0 40.0 29.0 41.0 30 34.94170790266986 35.0 34.0 40.0 29.0 41.0 31 34.69860645939038 35.0 34.0 40.0 28.0 41.0 32 34.40615274481868 35.0 33.0 40.0 27.0 41.0 33 34.14658014272422 35.0 33.0 40.0 25.0 41.0 34 33.950914242284085 35.0 33.0 40.0 23.0 41.0 35 33.7482500362195 35.0 33.0 39.0 23.0 41.0 36 33.52444681001069 35.0 33.0 39.0 23.0 41.0 37 33.44614682573808 35.0 33.0 39.0 23.0 41.0 38 33.48111201240218 35.0 33.0 39.0 23.0 41.0 39 33.47006641921191 35.0 33.0 39.0 23.0 41.0 40 33.26613085041848 35.0 32.0 39.0 22.0 41.0 41 33.26873323153134 35.0 32.0 39.0 22.0 41.0 42 33.239306723812135 35.0 32.0 39.0 23.0 41.0 43 33.113401526719926 35.0 32.0 39.0 22.0 41.0 44 33.04562495496773 35.0 32.0 39.0 22.0 41.0 45 32.9877217815193 35.0 32.0 39.0 22.0 41.0 46 32.953040152904414 35.0 32.0 38.0 22.0 40.0 47 32.89590243123911 35.0 32.0 38.0 22.0 40.0 48 32.90141012023326 35.0 32.0 38.0 22.0 40.0 49 32.942884746048975 35.0 32.0 38.0 22.0 40.0 50 32.79843748668401 35.0 32.0 38.0 21.0 40.0 51 32.62446842550132 35.0 32.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 4.0 13 8.0 14 18.0 15 52.0 16 133.0 17 422.0 18 997.0 19 1896.0 20 3284.0 21 5186.0 22 7569.0 23 10994.0 24 15653.0 25 22105.0 26 28357.0 27 32923.0 28 34745.0 29 37881.0 30 44750.0 31 54470.0 32 67567.0 33 87546.0 34 150730.0 35 204448.0 36 83042.0 37 95996.0 38 127443.0 39 172458.0 40 62.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.222220414475093 23.371691144854005 28.47798280212684 16.92810563854406 2 31.97558611681197 25.317860050931984 29.208880790181762 13.497673042074283 3 27.889793537200724 24.512818605746624 33.63323858155896 13.96414927549369 4 25.65913688338714 27.814178057410434 31.810409679401214 14.716275379801214 5 23.1109107094297 31.10647294848463 31.8304756725013 13.95214066958437 6 20.72328995514979 39.020221717602524 29.6408807034099 10.61560762383778 7 84.07767321251902 4.97040072330545 9.185498872353168 1.7664271918223717 8 86.02988515899007 3.384335044753363 8.745364097057427 1.840415699199142 9 81.8869161202751 4.645858464246507 10.632109772603489 2.8351156428749067 10 57.07705883674571 18.402762444208403 14.75338584580485 9.76679287324103 11 53.47261766690606 17.996949039350266 18.170647713212798 10.359785580530874 12 46.42782711636184 20.352107820236593 22.532560753861542 10.687504309540023 13 21.700325626907336 43.81134557591337 22.34344457950898 12.144884217670315 14 14.177979935556397 46.05951155189151 27.889406162816556 11.87310234973554 15 12.754224123972199 21.793605378615847 54.038571642180735 11.41359885523122 16 14.943199294048922 15.695945197371122 51.84510292924762 17.515752579332336 17 14.491288337474364 15.717018363870055 31.459913336602774 38.331779962052806 18 21.550256790479267 20.90295419452857 37.64341568137992 19.903373333612244 19 30.861574862811363 21.81816491457233 27.303153769811296 20.017106452805017 20 33.885341830777826 21.233307069350086 26.13243090596797 18.748920193904123 21 22.825803162679424 26.974892716664307 30.21241286981664 19.986891250839633 22 22.969751483837577 25.005868721920198 26.366095134500263 25.658284659741966 23 19.341680476563464 29.945744343752928 25.92596035920452 24.786614820479087 24 19.15419127462442 21.642064519527928 43.105859347460104 16.097884858387545 25 16.598295087860386 23.075582165593254 40.44304783066471 19.88307491588165 26 15.23977312257068 33.92423421894865 30.346831781124177 20.489160877356497 27 17.03455611931441 34.17176645043429 30.541448671731974 18.252228758519333 28 13.229687443104387 29.660714271879485 41.49112796447932 15.61847032053681 29 14.756872215262396 24.764611955458143 39.75685284654319 20.721662982736273 30 17.640719555666088 30.16042722746082 34.03541066720589 18.163442549667206 31 29.63925373099638 27.1035784870861 26.022494055740076 17.234673726177444 32 32.52232632263173 24.46788317718272 28.688636992239342 14.32115350794621 33 29.511497659096598 26.92546374524401 25.446390871600112 18.11664772405928 34 19.90871910011381 27.658685979603963 29.45463109950021 22.977963820782016 35 19.88857563213689 25.02670946378863 32.45763480047508 22.627080103599408 36 32.50210537977797 24.88973388154556 25.691753806534383 16.91640693214208 37 21.2211435136871 33.12996178164326 29.48120498225438 16.16768972241526 38 20.538899748284127 33.74356280617103 24.212990832397825 21.50454661314702 39 20.597238330540364 32.1935229453469 27.689443505707185 19.51979521840555 40 24.136368179208688 24.165731157528892 26.096095188732676 25.601805474529748 41 16.152814546063077 24.534976420521236 28.426539483908858 30.885669549506833 42 21.668328502774763 25.158571704160632 25.53014121345801 27.642958579606596 43 22.13224806525864 25.721736583869266 27.235440727458105 24.910574623413993 44 19.785843945454587 29.780025582204328 28.463727424789326 21.970403047551756 45 16.810188876002236 38.46155038075028 23.057607994167693 21.670652749079792 46 21.162572506800355 34.10335613418958 25.356984863733313 19.377086495276743 47 21.626801968791572 28.868921030632794 27.049113648671575 22.455163351904062 48 23.011045593190268 23.795711145768205 31.259020980971396 21.93422228007013 49 22.05004722093743 23.970416993029588 32.34374673152863 21.63578905450435 50 19.635155310011847 35.34853235467069 25.133082469682144 19.88322986563532 51 17.886159965477194 34.35584675779262 24.49747858013343 23.26051469659676 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 935.0 1 1497.5 2 2060.0 3 7639.0 4 13218.0 5 10015.0 6 6812.0 7 7304.0 8 7796.0 9 8584.5 10 9373.0 11 9764.0 12 10155.0 13 9599.5 14 9044.0 15 8834.0 16 8624.0 17 7994.0 18 7364.0 19 7137.5 20 6911.0 21 6739.0 22 6567.0 23 7186.5 24 7806.0 25 8063.5 26 8029.0 27 7737.0 28 9647.5 29 11558.0 30 12205.5 31 12853.0 32 18117.0 33 23381.0 34 24359.5 35 25338.0 36 27902.0 37 30466.0 38 39777.0 39 49088.0 40 70605.5 41 92123.0 42 113761.0 43 135399.0 44 134389.5 45 133380.0 46 129024.0 47 124668.0 48 110039.5 49 95411.0 50 94783.5 51 94156.0 52 87918.5 53 81681.0 54 70979.5 55 60278.0 56 56350.5 57 52423.0 58 51044.5 59 49666.0 60 47393.5 61 45121.0 62 36093.0 63 27065.0 64 21355.0 65 15645.0 66 11952.5 67 8260.0 68 6430.5 69 4601.0 70 3417.5 71 2234.0 72 1837.5 73 1441.0 74 1140.0 75 641.0 76 443.0 77 307.5 78 172.0 79 156.5 80 141.0 81 117.5 82 94.0 83 68.0 84 42.0 85 36.0 86 30.0 87 18.5 88 7.0 89 8.0 90 9.0 91 6.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1290741.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.39858638782545 #Duplication Level Percentage of deduplicated Percentage of total 1 83.18439592082782 14.472908985475977 2 5.92002211166372 2.0600003225523618 3 1.8405354565191754 0.9606814542031389 4 0.8902814356930658 0.6195855387353231 5 0.5476865754151835 0.47644860979066733 6 0.3916421691635448 0.4088412067984369 7 0.339085272203884 0.41297230808950086 8 0.26306596632411805 0.3661580752629559 9 0.2320514226976509 0.36336300518005904 >10 3.264807334080781 14.207116675980663 >50 1.4082558332469903 17.889324672780816 >100 1.7132512217049718 46.38314552874563 >500 0.004024865830160466 0.4480170299090247 >1k 4.47207314462274E-4 0.38195824936148004 >5k 4.47207314462274E-4 0.5494783371339931 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7062 0.5471275802039294 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4909 0.3803241703796501 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014797701475354079 0.0 2 0.0 0.0 0.0 0.05717645910372414 0.0 3 0.0 0.0 0.0 0.08026397240034988 0.0 4 0.0 0.0 0.0 0.11512766697579142 0.0 5 0.0 0.0 0.0 0.19206021967226578 0.0 6 0.0 0.0 0.0 0.273641264978799 0.0 7 0.0 0.0 0.0 0.32446478418210933 0.0 8 0.0 0.0 0.0 0.45113620780621366 0.0 9 0.0 0.0 0.0 0.5061433703585769 0.0 10 0.0 0.0 0.0 0.6004302954659377 0.0 11 0.0 0.0 0.0 0.699985512198032 0.0 12 0.0 0.0 0.0 0.7848205023316064 0.0 13 0.0 0.0 0.0 0.8204589456753911 0.0 14 0.0 0.0 0.0 0.8357989712885854 0.0 15 0.0 0.0 0.0 0.8607458816292347 0.0 16 0.0 0.0 0.0 0.9162178934426038 0.0 17 7.747487683431456E-5 0.0 0.0 0.9726970786548192 0.0 18 7.747487683431456E-5 0.0 0.0 1.0691533003135407 0.0 19 7.747487683431456E-5 0.0 0.0 1.1092852865137157 0.0 20 7.747487683431456E-5 0.0 0.0 1.1518189938957544 0.0 21 7.747487683431456E-5 0.0 0.0 1.2100026263983248 0.0 22 7.747487683431456E-5 0.0 0.0 1.266249386980037 0.0 23 7.747487683431456E-5 0.0 0.0 1.327609489432814 0.0 24 7.747487683431456E-5 0.0 0.0 1.3768835110994382 0.0 25 7.747487683431456E-5 0.0 0.0 1.414768725871418 0.0 26 7.747487683431456E-5 0.0 0.0 1.4570700086229538 0.0 27 7.747487683431456E-5 0.0 0.0 1.493793100242419 0.0 28 7.747487683431456E-5 0.0 0.0 1.5340800361962625 0.0 29 7.747487683431456E-5 0.0 0.0 1.5765362687014668 0.0 30 7.747487683431456E-5 0.0 0.0 1.6408404164739478 0.0 31 1.5494975366862912E-4 0.0 0.0 1.7011158706510445 0.0 32 1.5494975366862912E-4 0.0 0.0 1.752714138622698 0.0 33 1.5494975366862912E-4 0.0 0.0 1.8064817031457123 0.0 34 1.5494975366862912E-4 0.0 0.0 1.8602492676687268 0.0 35 1.5494975366862912E-4 0.0 0.0 1.9354773730748462 0.0 36 1.5494975366862912E-4 0.0 0.0 1.9990067720789841 0.0 37 1.5494975366862912E-4 0.0 0.0 2.0638532439893056 0.0 38 1.5494975366862912E-4 0.0 0.0 2.1284672912691236 0.0 39 1.5494975366862912E-4 0.0 0.0 2.2015261001238824 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 45 3.8562575E-10 45.000004 1 CACGCAT 35 1.2120836E-7 45.000004 42 CATTACG 35 1.2120836E-7 45.000004 29 TCGAATA 35 1.2120836E-7 45.000004 25 TAACTCG 35 1.2120836E-7 45.000004 38 CTTACGT 45 3.8562575E-10 45.000004 22 TCGCCTA 20 7.0336094E-4 45.0 27 TAATACG 25 3.891073E-5 45.0 1 GGTACGA 25 3.891073E-5 45.0 7 TCACCGT 25 3.891073E-5 45.0 15 ACGCACC 25 3.891073E-5 45.0 20 CACGCTA 20 7.0336094E-4 45.0 30 ATTCGGT 20 7.0336094E-4 45.0 44 TTCGTCA 20 7.0336094E-4 45.0 27 TTCGTAG 40 6.8157533E-9 45.0 1 TTGTACG 25 3.891073E-5 45.0 1 GTCTACG 20 7.0336094E-4 45.0 32 TAAGTCC 25 3.891073E-5 45.0 43 TAACGGC 25 3.891073E-5 45.0 18 ACTTACG 20 7.0336094E-4 45.0 1 >>END_MODULE