##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545467_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1090137 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.916925120420643 31.0 31.0 33.0 28.0 34.0 2 31.20240942193504 31.0 31.0 34.0 28.0 34.0 3 31.29321268794656 31.0 31.0 34.0 28.0 34.0 4 35.11609091334392 35.0 35.0 37.0 32.0 37.0 5 34.980746456638016 35.0 35.0 37.0 32.0 37.0 6 35.03889878061198 37.0 35.0 37.0 32.0 37.0 7 35.5639511364168 37.0 35.0 37.0 35.0 37.0 8 35.48519956665997 37.0 35.0 37.0 35.0 37.0 9 37.197169713531416 39.0 37.0 39.0 34.0 39.0 10 36.54624602228894 39.0 35.0 39.0 32.0 39.0 11 36.233870605254204 38.0 35.0 39.0 31.0 39.0 12 35.38743662493797 37.0 35.0 39.0 30.0 39.0 13 34.88101495500107 37.0 34.0 39.0 27.0 39.0 14 35.846945842586756 38.0 34.0 40.0 29.0 41.0 15 36.23007475207245 38.0 35.0 40.0 30.0 41.0 16 36.35489025691266 38.0 35.0 40.0 31.0 41.0 17 36.26763516879071 38.0 34.0 40.0 31.0 41.0 18 36.205134767465005 37.0 35.0 40.0 30.0 41.0 19 36.09859219529289 37.0 35.0 40.0 30.0 41.0 20 35.956708193557326 37.0 34.0 40.0 30.0 41.0 21 35.769900480398334 36.0 34.0 40.0 30.0 41.0 22 35.65268035118522 36.0 34.0 40.0 30.0 41.0 23 35.60067220908932 36.0 34.0 40.0 30.0 41.0 24 35.50565112458342 36.0 34.0 40.0 29.0 41.0 25 35.39090866560809 36.0 34.0 40.0 29.0 41.0 26 35.23449804932775 36.0 34.0 40.0 29.0 41.0 27 35.124989794860646 36.0 34.0 40.0 29.0 41.0 28 35.176765856034606 36.0 34.0 40.0 29.0 41.0 29 35.22902992926577 36.0 34.0 40.0 29.0 41.0 30 35.13568202895599 36.0 34.0 40.0 29.0 41.0 31 34.95893635387112 36.0 34.0 40.0 27.0 41.0 32 34.73215017928939 36.0 34.0 40.0 26.0 41.0 33 34.47268095661371 36.0 33.0 40.0 25.0 41.0 34 34.29330900611575 36.0 33.0 40.0 24.0 41.0 35 34.11735497464998 35.0 33.0 40.0 23.0 41.0 36 33.90120232594619 35.0 33.0 40.0 23.0 41.0 37 33.85926264313568 35.0 33.0 40.0 23.0 41.0 38 33.8616366566771 35.0 33.0 40.0 23.0 41.0 39 33.82286905223839 35.0 33.0 40.0 23.0 41.0 40 33.65794299248626 35.0 33.0 40.0 23.0 41.0 41 33.616409680618126 35.0 33.0 40.0 23.0 41.0 42 33.56867623060221 35.0 33.0 40.0 23.0 41.0 43 33.468875012957085 35.0 32.0 40.0 23.0 41.0 44 33.41878864766539 35.0 32.0 40.0 22.0 41.0 45 33.33863817116564 35.0 32.0 39.0 22.0 41.0 46 33.28308185118017 35.0 32.0 39.0 22.0 41.0 47 33.20761060307099 35.0 32.0 39.0 22.0 41.0 48 33.18173495624862 35.0 32.0 39.0 22.0 41.0 49 33.23351743863386 35.0 32.0 39.0 22.0 41.0 50 33.13603703020813 35.0 32.0 39.0 22.0 41.0 51 32.94822026956245 35.0 32.0 39.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 8.0 14 12.0 15 63.0 16 168.0 17 419.0 18 958.0 19 1802.0 20 3047.0 21 4577.0 22 6569.0 23 9480.0 24 12922.0 25 17798.0 26 23085.0 27 26841.0 28 28788.0 29 32039.0 30 37130.0 31 44485.0 32 53688.0 33 67976.0 34 109869.0 35 144990.0 36 78369.0 37 92420.0 38 124490.0 39 168075.0 40 65.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.70071835007894 23.030499836259114 26.812685011149973 16.456096802511976 2 32.32657913638378 25.660444512937364 28.593837288340822 13.419139062338036 3 29.45574730515522 24.394089917138857 32.85614560371769 13.294017173988223 4 26.76168224727718 27.954009450188373 30.910518586196044 14.373789716338406 5 22.430483508036144 31.79416898976918 31.051051381615334 14.72429612057934 6 21.40318143499395 40.25622467634802 28.177375871106108 10.163218017551923 7 84.59689011564602 4.543006979856661 8.939151684604779 1.9209512198925458 8 85.7533502669848 3.999405579298749 8.489208237129828 1.7580359165866306 9 81.28345336411846 5.604433204266987 10.129919450491084 2.9821939811234732 10 49.16877419994001 23.036921047538062 16.165307663165272 11.628997089356659 11 44.1500471959029 21.046253819474067 22.08639831507416 12.717300669548873 12 40.606088959461054 21.10404472098461 25.456616920625574 12.833249398928759 13 21.77038298856015 38.232901002351085 25.15188457964458 14.844831429444188 14 15.57253813052855 40.760473224924944 28.35423437604631 15.312754268500198 15 14.94738734672798 23.78875315671333 46.82631632537929 14.437543171179401 16 17.14545969910204 18.76681554703675 46.50433844553483 17.583386308326386 17 16.854303633396537 19.057971612742254 31.254236852799234 32.83348790106197 18 21.671496334864333 22.584500847141232 35.09357080807275 20.650432009921687 19 29.837167255124815 22.95472954316751 27.61744624758173 19.590656954125947 20 32.509767121013226 21.530596613086246 27.261711142727936 18.697925123172592 21 23.130303805851927 28.189576172536114 28.968285637493267 19.711834384118692 22 22.87244630720726 25.653289448940818 26.76535151086515 24.70891273298677 23 20.132790649248673 30.4347985620156 27.22639448069371 22.206016308042017 24 19.800171904999097 23.527409857660093 39.37734431543925 17.29507392190156 25 17.896374492380314 24.71927840262279 37.10478591222938 20.279561192767513 26 17.62420686574256 33.34727653496763 29.377133332782947 19.65138326650687 27 17.997370972639217 33.93380831950479 29.75332458213968 18.31549612571631 28 16.232455186825142 29.405386662410322 37.64994674981218 16.712211400952356 29 16.556634624822383 25.1360150146266 37.95889874391934 20.34845161663167 30 18.37236971132986 30.4597495544138 32.18742231480997 18.980458419446364 31 27.23290742356236 27.160072541341133 26.87451210260729 18.73250793248922 32 29.876428375516106 26.093784542676744 27.637076807777373 16.392710274029778 33 28.04436506604216 27.450219559559947 26.46584787049701 18.039567503900887 34 20.018493088483375 27.989142649043192 29.42364124876048 22.568723013712955 35 20.91984768886846 26.24981997675522 31.091413281083017 21.7389190532933 36 28.446332892104387 27.228229112487696 26.2260614950231 18.099376500384814 37 20.580073880622344 33.4390998562566 28.739323589603877 17.241502673517182 38 20.39266624286672 33.34791865609552 25.323239189202823 20.936175911834933 39 21.123767012769953 32.27594329886978 26.665822736041434 19.93446695231884 40 24.192647346159244 26.626194689291342 26.873319591941197 22.307838372608213 41 17.42386507383934 26.106993891593444 28.34038290600172 28.12875812856549 42 21.18476851991997 27.08182549532765 25.083728008498014 26.64967797625436 43 21.811753935514528 27.276021270721017 26.520152971598982 24.39207182216547 44 19.740913298053364 30.920975987421766 28.73996571073177 20.5981450037931 45 17.79308472237893 36.675390340847066 24.53150383850837 21.00002109826563 46 20.253050763344422 34.60023831867004 25.93270387116482 19.214007046820722 47 21.808635061464752 29.21907980373109 27.07723891584269 21.89504621896147 48 22.572484008890626 25.610359064961557 31.17397171181237 20.643185214335446 49 20.31414400208414 26.456858174706483 31.924978236680346 21.304019586529034 50 18.83882484495068 34.19295006040525 26.851487473592766 20.116737621051296 51 18.567299339440822 34.04471181145122 25.343328407346966 22.044660441760993 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 699.0 1 1378.0 2 2057.0 3 6937.5 4 11818.0 5 8985.5 6 6153.0 7 6258.5 8 6364.0 9 6667.5 10 6971.0 11 6963.0 12 6955.0 13 7068.5 14 7182.0 15 6986.0 16 6790.0 17 6481.5 18 6173.0 19 5698.5 20 5224.0 21 5444.0 22 5664.0 23 5720.5 24 5777.0 25 6663.0 26 8481.5 27 9414.0 28 11716.5 29 14019.0 30 16290.5 31 18562.0 32 20744.0 33 22926.0 34 26210.5 35 29495.0 36 29526.5 37 29558.0 38 38870.5 39 48183.0 40 62459.0 41 76735.0 42 90409.0 43 104083.0 44 106670.0 45 109257.0 46 99954.0 47 90651.0 48 84279.0 49 77907.0 50 75591.0 51 73275.0 52 69398.5 53 65522.0 54 60116.5 55 54711.0 56 51299.0 57 47887.0 58 44620.0 59 41353.0 60 38316.5 61 35280.0 62 29140.5 63 23001.0 64 18506.5 65 14012.0 66 10566.5 67 7121.0 68 6157.0 69 5193.0 70 3968.0 71 2743.0 72 2221.5 73 1700.0 74 1333.5 75 769.0 76 571.0 77 441.0 78 311.0 79 245.5 80 180.0 81 125.5 82 71.0 83 54.0 84 37.0 85 32.0 86 27.0 87 16.0 88 5.0 89 3.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1090137.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.140433941407146 #Duplication Level Percentage of deduplicated Percentage of total 1 80.01396874813858 15.315020832135623 2 5.595157704529026 2.141874928705861 3 2.095235580457104 1.2031115465827515 4 1.0901392844702655 0.8346295584534388 5 0.7833632074453478 0.7496955862118251 6 0.6175394884367825 0.7091984270780759 7 0.4950527830837096 0.6632867564486453 8 0.40720196691093424 0.6235217878775836 9 0.36749360641188394 0.6330588387674527 >10 5.434440048659988 25.511980749149497 >50 2.351668058368794 32.1359865733577 >100 0.7453689914723782 18.224861834017215 >500 0.001926018065820099 0.2912320903144123 >1k 9.630090329100495E-4 0.4068033059012075 >5k 4.8150451645502475E-4 0.5557371849987045 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6030 0.5531414858866363 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2608 0.23923598593571269 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1806 0.16566725099689306 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008806232611130527 0.0 2 0.0 0.0 0.0 0.03238125116384454 0.0 3 0.0 0.0 0.0 0.04329731033805843 0.0 4 0.0 0.0 0.0 0.06301960212340284 0.0 5 0.0 0.0 0.0 0.10365669636018225 0.0 6 0.0 0.0 0.0 0.15621889725786758 0.0 7 0.0 0.0 0.0 0.18850841683201286 0.0 8 0.0 0.0 0.0 0.2790474958651986 0.0 9 0.0 0.0 0.0 0.3172995687697968 0.0 10 0.0 0.0 0.0 0.3752739334597395 0.0 11 0.0 0.0 0.0 0.43508292994366765 0.0 12 0.0 0.0 0.0 0.4819577722799978 0.0 13 0.0 0.0 0.0 0.5038816222181248 0.0 14 0.0 0.0 0.0 0.5124126600601576 0.0 15 0.0 0.0 0.0 0.5254385457974549 0.0 16 0.0 0.0 0.0 0.5580032601406979 0.0 17 0.0 0.0 0.0 0.5933199221749192 0.0 18 0.0 0.0 0.0 0.6449648071756119 0.0 19 0.0 0.0 0.0 0.6684480941386266 0.0 20 0.0 0.0 0.0 0.6949585235617175 0.0 21 0.0 0.0 0.0 0.7299082592371418 0.0 22 0.0 0.0 0.0 0.7654083844507616 0.0 23 0.0 0.0 0.0 0.8087056947888202 0.0 24 0.0 0.0 0.0 0.8418207986702588 0.0 25 0.0 0.0 0.0 0.8692485439903425 0.0 26 0.0 0.0 0.0 0.8983274579250131 0.0 27 0.0 0.0 0.0 0.9281402245772779 0.0 28 0.0 0.0 0.0 0.9596041598441297 0.0 29 0.0 0.0 0.0 0.9903342423933873 0.0 30 0.0 0.0 0.0 1.0384015953958081 0.0 31 0.0 0.0 0.0 1.0821575636823628 0.0 32 0.0 0.0 0.0 1.1209600261251567 0.0 33 0.0 0.0 0.0 1.160588072875244 0.0 34 0.0 0.0 0.0 1.2064538677248824 0.0 35 0.0 0.0 0.0 1.265804206260314 0.0 36 0.0 0.0 0.0 1.3137798276730357 0.0 37 0.0 0.0 0.0 1.3624893018033513 0.0 38 9.173158969927633E-5 0.0 0.0 1.4083550966529894 0.0 39 9.173158969927633E-5 0.0 0.0 1.4596330552948849 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACCGT 25 3.890672E-5 45.000004 38 CGTCTAC 25 3.890672E-5 45.000004 44 CGTTCAC 45 3.8562575E-10 45.000004 21 CGTAGCG 25 3.890672E-5 45.000004 23 TTAACGA 25 3.890672E-5 45.000004 45 CACCGTA 25 3.890672E-5 45.000004 39 ACCGGAT 20 7.033126E-4 45.0 21 CGTATCC 20 7.033126E-4 45.0 16 CGACGTC 20 7.033126E-4 45.0 18 TCTACCG 20 7.033126E-4 45.0 45 CTATTAG 20 7.033126E-4 45.0 1 TCATACC 40 6.8139343E-9 45.0 37 CGCACGG 20 7.033126E-4 45.0 2 TCTAGCG 55 1.8189894E-12 44.999996 1 GTGACGG 105 0.0 42.85714 2 GCTACGA 190 0.0 42.63158 10 CGGGTAT 175 0.0 42.428574 6 TCGATAG 85 0.0 42.352943 1 CGGGCAC 75 0.0 42.0 6 TGCGATG 70 0.0 41.785713 1 >>END_MODULE