##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545466_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1075164 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.97704629247259 31.0 31.0 33.0 30.0 34.0 2 31.275466812504884 31.0 31.0 34.0 30.0 34.0 3 31.37416896399061 31.0 31.0 34.0 28.0 34.0 4 35.2160600615348 37.0 35.0 37.0 33.0 37.0 5 35.09764184812735 37.0 35.0 37.0 32.0 37.0 6 35.140012128382274 37.0 35.0 37.0 32.0 37.0 7 35.594649746457286 37.0 35.0 37.0 35.0 37.0 8 35.51834231800916 37.0 35.0 37.0 35.0 37.0 9 37.22631710139105 39.0 37.0 39.0 34.0 39.0 10 36.593333668165975 39.0 35.0 39.0 32.0 39.0 11 36.34901559203991 38.0 35.0 39.0 32.0 39.0 12 35.75915023196461 37.0 35.0 39.0 31.0 39.0 13 35.38455993690265 37.0 35.0 39.0 30.0 39.0 14 36.40839165001805 38.0 35.0 40.0 30.0 41.0 15 36.695253003262756 38.0 35.0 40.0 31.0 41.0 16 36.74851092484495 38.0 35.0 40.0 31.0 41.0 17 36.67720552399448 38.0 35.0 40.0 31.0 41.0 18 36.60847740437738 38.0 35.0 40.0 31.0 41.0 19 36.528727710377204 38.0 35.0 40.0 31.0 41.0 20 36.40167267505237 38.0 35.0 40.0 31.0 41.0 21 36.25006603643723 38.0 35.0 40.0 30.0 41.0 22 36.16260496073157 38.0 34.0 40.0 30.0 41.0 23 36.074727204407885 38.0 34.0 40.0 30.0 41.0 24 35.97351287803535 37.0 34.0 40.0 30.0 41.0 25 35.827816965597805 37.0 34.0 40.0 30.0 41.0 26 35.6934244450149 37.0 34.0 40.0 30.0 41.0 27 35.61129929945571 37.0 34.0 40.0 29.0 41.0 28 35.6628505046672 37.0 34.0 40.0 29.0 41.0 29 35.678590428995015 37.0 34.0 40.0 29.0 41.0 30 35.57945950571262 37.0 34.0 40.0 29.0 41.0 31 35.437483955936024 37.0 34.0 40.0 29.0 41.0 32 35.24322428950374 37.0 34.0 40.0 27.0 41.0 33 35.0198983596921 37.0 34.0 40.0 27.0 41.0 34 34.84170135904848 37.0 34.0 40.0 26.0 41.0 35 34.656491474788965 37.0 33.0 40.0 25.0 41.0 36 34.48618443325855 37.0 33.0 40.0 24.0 41.0 37 34.44357884006533 37.0 33.0 40.0 24.0 41.0 38 34.39260708133829 37.0 33.0 40.0 24.0 41.0 39 34.32902236309995 36.0 33.0 40.0 23.0 41.0 40 34.16974526676861 36.0 33.0 40.0 23.0 41.0 41 34.11101748198414 36.0 33.0 40.0 23.0 41.0 42 34.05412104571953 36.0 33.0 40.0 23.0 41.0 43 33.96402502315926 36.0 33.0 40.0 23.0 41.0 44 33.89495183990535 36.0 33.0 40.0 23.0 41.0 45 33.83000174857045 35.0 33.0 40.0 23.0 41.0 46 33.766998336997894 35.0 33.0 40.0 23.0 41.0 47 33.67650423563289 35.0 33.0 40.0 23.0 41.0 48 33.6224808494332 35.0 32.0 39.0 23.0 41.0 49 33.63135484447024 35.0 32.0 39.0 23.0 41.0 50 33.55384015833864 35.0 32.0 39.0 23.0 41.0 51 33.377545193105426 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 0.0 13 2.0 14 12.0 15 41.0 16 107.0 17 291.0 18 670.0 19 1300.0 20 2257.0 21 3607.0 22 5338.0 23 7781.0 24 10769.0 25 15294.0 26 19912.0 27 23654.0 28 25628.0 29 28473.0 30 33772.0 31 41294.0 32 50371.0 33 63593.0 34 99326.0 35 126947.0 36 85815.0 37 103168.0 38 140135.0 39 185546.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.16281423113125 23.565149130737264 27.82301118713052 16.449025451000963 2 31.578903311494805 25.75858194656815 28.810395437347232 13.852119304589811 3 28.593591303280242 25.15448805949604 32.81099441573564 13.44092622148807 4 25.988686377148046 27.810361954083284 31.25327856959497 14.94767309917371 5 22.57748585332098 31.563742833651425 31.466269331934477 14.392501981093117 6 21.458028728640468 39.80416010952747 28.71106175429981 10.026749407532247 7 85.20886115978585 4.746531691909327 8.343750348784 1.7008567995208173 8 86.4374179194988 3.7486374171754258 7.966970620296067 1.8469740430297148 9 81.42990278692366 5.468096030001004 9.735817047445785 3.3661841356295414 10 44.775122678958745 23.672202566306165 17.648284354758903 13.90439039997619 11 39.40682537733778 23.52720143159555 22.49582389291308 14.570149298153584 12 35.17714506810124 22.633477311368313 26.595663545282395 15.593714075248055 13 22.427462229018087 32.91060712598264 27.183387836646318 17.47854280835296 14 17.993999055027885 35.01456521981763 29.314504577906252 17.676931147248233 15 17.864251407227176 23.505065273762888 42.0043825872146 16.626300731795336 16 19.174749154547584 19.65839630047137 40.99272297063518 20.174131574345864 17 19.658024264205277 20.56383956308061 29.96212670811151 29.81600946460261 18 22.493684684383034 23.702244494793355 33.106484220081775 20.69758660074184 19 28.88508171776585 23.25849823840828 27.12404805220413 20.732371991621743 20 30.592821188209427 22.597947847956217 27.271839458910456 19.5373915049239 21 24.28373717870018 26.16307837688018 29.221681529515497 20.331502914904146 22 23.723450561960778 24.43896931072841 27.396006562719734 24.441573564591078 23 22.157549917966005 28.286382356552114 27.288860118084312 22.26720760739757 24 21.159004579766435 23.578170400050595 36.47434251890874 18.788482501274224 25 20.521613446878803 24.631033033100067 33.75726865854883 21.090084861472295 26 19.764054600042414 30.54947896320933 28.60038096513648 21.086085471611774 27 19.278454263721628 30.480094199582574 30.6220260350979 19.619425501597895 28 18.97756993351712 27.47069284313835 35.116317138594674 18.43542008474986 29 18.726910499235466 25.361898277844126 34.76055745914112 21.150633763779293 30 20.153111525311488 28.633771220018527 31.84593234148465 19.367184913185337 31 26.479030175861546 26.661699982514296 27.454602274629732 19.40466756699443 32 28.33735132500716 25.732353389808438 28.069671231551652 17.860624053632748 33 26.78103061486434 27.284581701024212 26.126339795603275 19.80804788850817 34 20.93643388357497 27.15539210762265 29.006272531446363 22.901901477356013 35 22.278275686313904 25.696079853864155 29.980635512349746 22.0450089474722 36 27.434791343460162 26.969932028974185 26.16307837688018 19.432198250685477 37 21.792117295593975 31.41371920934853 28.475748815994585 18.318414679062915 38 22.113835656699816 30.73670621412175 25.870843889862382 21.27861423931605 39 21.789699059864358 30.177163669914542 27.433210189329255 20.599927080891845 40 24.053446729987236 25.763790454293485 27.608253252527053 22.57450956319222 41 19.083321242154685 25.980501579293954 28.53741382709987 26.3987633514515 42 22.14573776651748 27.053640188845606 25.6771060042933 25.123516040343613 43 22.25427934715076 26.638912761215966 27.84254309110052 23.264264800532754 44 21.012608309057967 29.034082242336982 28.366556171895635 21.586753276709413 45 19.826277665546836 33.0776514094594 24.839373342113387 22.25669758288038 46 21.295169853157287 30.987644675602976 26.71266895096934 21.004516520270396 47 22.474524816679132 27.936947293622183 27.70488967264529 21.8836382170534 48 22.838934339319398 25.962550829454855 29.9570112094527 21.24150362177305 49 21.410501095646804 26.649236767600105 30.51153126406762 21.42873087268547 50 20.92341261426164 31.168175273725684 27.36103515370678 20.547376958305897 51 19.62342489145842 30.82459978198675 26.625705473769585 22.92626985278525 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 591.0 1 1198.0 2 1805.0 3 7053.0 4 12301.0 5 9074.5 6 5848.0 7 5978.0 8 6108.0 9 6294.0 10 6480.0 11 6502.0 12 6524.0 13 6340.5 14 6157.0 15 5818.5 16 5480.0 17 5243.0 18 5006.0 19 4745.5 20 4485.0 21 4851.0 22 5217.0 23 5217.0 24 5217.0 25 5522.5 26 7516.5 27 9205.0 28 10562.0 29 11919.0 30 13550.5 31 15182.0 32 18924.5 33 22667.0 34 26140.0 35 29613.0 36 30339.0 37 31065.0 38 36381.0 39 41697.0 40 54566.5 41 67436.0 42 76386.5 43 85337.0 44 86487.0 45 87637.0 46 86554.5 47 85472.0 48 82429.5 49 79387.0 50 78686.5 51 77986.0 52 73280.5 53 68575.0 54 65849.5 55 63124.0 56 58832.0 57 54540.0 58 52629.5 59 50719.0 60 45046.5 61 39374.0 62 35736.5 63 32099.0 64 25767.5 65 19436.0 66 15020.0 67 10604.0 68 8457.0 69 6310.0 70 4937.5 71 3565.0 72 2929.5 73 2294.0 74 1883.5 75 1051.0 76 629.0 77 504.5 78 380.0 79 303.5 80 227.0 81 162.5 82 98.0 83 64.5 84 31.0 85 28.0 86 25.0 87 14.5 88 4.0 89 3.5 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1075164.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.99043894895823 #Duplication Level Percentage of deduplicated Percentage of total 1 76.84785747083059 15.362224031288827 2 5.607689952173948 2.242003672672396 3 2.290005201040379 1.3733462749258354 4 1.4254983863431705 1.139853538561265 5 1.0371617403975668 1.036665922580641 6 0.8150437273436829 0.9775849123317147 7 0.7049068689419548 0.9863978409799811 8 0.6140263857186113 0.9819725581405903 9 0.5361181499296706 0.9645513431037762 >10 7.663629435007284 37.31881096914187 >50 2.2248295051620595 30.416913182435145 >100 0.23183097364151573 6.1762762530685755 >500 0.0 0.0 >1k 9.348023130706278E-4 0.39093431125894706 >5k 4.674011565353139E-4 0.6324651895104716 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6769 0.6295783712996342 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3053 0.2839566800971759 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1131 0.10519325423842317 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.005673553057952089 0.0 2 0.0 0.0 0.0 0.02920484688847469 0.0 3 0.0 0.0 0.0 0.042505143401378766 0.0 4 0.0 0.0 0.0 0.06510634656666332 0.0 5 0.0 0.0 0.0 0.10770449903456589 0.0 6 0.0 0.0 0.0 0.16378896614842015 0.0 7 0.0 0.0 0.0 0.19792329356265648 0.0 8 0.0 0.0 0.0 0.2885141243568423 0.0 9 0.0 0.0 0.0 0.33139130402431627 0.0 10 0.0 0.0 0.0 0.404403421245503 0.0 11 0.0 0.0 0.0 0.46458028728640466 0.0 12 0.0 0.0 0.0 0.516851382672783 0.0 13 0.0 0.0 0.0 0.5392665677050199 0.0 14 0.0 0.0 0.0 0.5494975650226384 0.0 15 0.0 0.0 0.0 0.5622398071363996 0.0 16 0.0 0.0 0.0 0.5881893366965412 0.0 17 0.0 0.0 0.0 0.6247418998403964 0.0 18 0.0 0.0 0.0 0.6776640586924413 0.0 19 0.0 0.0 0.0 0.7001722527912021 0.0 20 0.0 0.0 0.0 0.7278889546152959 0.0 21 0.0 0.0 0.0 0.7607211550981989 0.0 22 0.0 0.0 0.0 0.793088310248483 0.0 23 0.0 0.0 0.0 0.8301989277914811 0.0 24 0.0 0.0 0.0 0.8616359922765271 0.0 25 9.300906652380474E-5 0.0 0.0 0.8877715399697163 0.0 26 9.300906652380474E-5 0.0 0.0 0.9157672689933815 0.0 27 9.300906652380474E-5 0.0 0.0 0.9459022065470942 0.0 28 9.300906652380474E-5 0.0 0.0 0.976967234766045 0.0 29 9.300906652380474E-5 0.0 0.0 1.011287580313329 0.0 30 9.300906652380474E-5 0.0 0.0 1.0605823855709455 0.0 31 9.300906652380474E-5 0.0 0.0 1.102715492706229 0.0 32 9.300906652380474E-5 0.0 0.0 1.1454996633071792 0.0 33 9.300906652380474E-5 0.0 0.0 1.1853075437793676 0.0 34 9.300906652380474E-5 0.0 0.0 1.2321841133073652 0.0 35 9.300906652380474E-5 0.0 0.0 1.2873384897559814 0.0 36 9.300906652380474E-5 0.0 0.0 1.3322618688869792 0.0 37 9.300906652380474E-5 0.0 0.0 1.3815566741445957 0.0 38 9.300906652380474E-5 0.0 0.0 1.436618041526688 0.0 39 9.300906652380474E-5 0.0 0.0 1.512327421677065 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGAA 25 3.890638E-5 45.0 37 CACGATC 20 7.033085E-4 45.0 34 CGCTAAT 20 7.033085E-4 45.0 35 GTCCGAT 25 3.890638E-5 45.0 38 ACGTAAG 50 2.1827873E-11 45.0 1 TATCCGT 25 3.890638E-5 45.0 15 TCTAGCG 60 0.0 44.999996 1 CGGTCTA 120 0.0 44.999996 31 CGACGGT 125 0.0 43.199997 28 GCGATAT 105 0.0 42.85714 9 CGTTTTT 5130 0.0 41.315792 1 TAGTACG 120 0.0 41.249996 1 CGTAAGG 170 0.0 39.705883 2 GCGTAAG 85 0.0 39.705883 1 CGTCTAA 40 3.4579534E-7 39.375 38 TCGATAG 80 0.0 39.375 1 TCGAACG 40 3.4579534E-7 39.375 1 AGGGCGA 950 0.0 39.31579 6 ACATACG 235 0.0 39.255318 17 CGTGCGG 75 0.0 39.0 2 >>END_MODULE